Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is cysD
Identifier: 146342052
GI number: 146342052
Start: 5402486
End: 5403418
Strand: Direct
Name: cysD
Synonym: BRADO5192
Alternate gene names: 146342052
Gene position: 5402486-5403418 (Clockwise)
Preceding gene: 146342051
Following gene: 146342053
Centisome position: 72.45
GC content: 56.38
Gene sequence:
>933_bases ATGACGATGGATCAGGTCCCGATATCACGTTCGCAGCTCCCCGCACATCTGAAGCGGCTCGAATCCGAATCGATCGAGAT CATCCGCGAGGTTGCAGCAGAGCTCAAGAATCCCGTGATGCTGTATTCCATAGGCAAAGATTCCGGGGTCATGCTCCACA TTGCGTTCAAGGCTTTTTTCCCCGGACGCCTTCCGTTTCCACTGCTGCACGTCGATACGACGTGGAAGTTCAGGGACATG ATCATGTTCCGGGATGAGCTGGCCAAGAAACTCGGTTTCGACCTGCTGGTTCATACGAATGAAGACGGCCTGCGCGCGGG CATAAATCCTTTTACCTCGGGCCCCTCGCTGCACACGCACGTGATGAAGACGGAGGCGCTGAAGCAGGCGCTCGATTTGC ATGGTTTCGACGCCGCATTTGGCGGCGCCCGTCGAGACGAGGAGAAGAGTCGAGCCAAAGAACGGATCTTTTCGTTTCGA GCGGAAGGTCACGTTTGGGAGCCGCGCAATCAGCGTCCCGAGCTTTGGAATTTGTTCAACACACGTATTAGGCCGGGCGA ATCGCTCCGCGTATTCCCACTCTCGAACTGGACGGAGTTCGATGTCTGGCACTACATATCTCTCGAAAGGATTCCGGTCG TCCCACTCTATTTCGCTAAGGAACGTCCGGTCGTCTGGCGCGATGGCACCTGGATCATGGTTGACGACGCGCGCTTCCCG CTGGCGCCTGGCGAGACACCGCAGCTTCGCAAGGTCCGCTTTAGAACACTCGGCTGTTATCCTCTGACAGGCGCCATAGA GTCGGCTGCAACATCGGTCGAAGACATCCTCGATGAAATGAGGACTACGCGTATCTCGGAGCGTCAGGGACGCCTCATTG ATACGGACGAGGCCGCATCCATGGAGAAAAAGAAGAAAGAGGGCTACTTCTGA
Upstream 100 bases:
>100_bases GCCTGACAGCAGACCAGATCGATTTCATAGCTGACGAGCTGACGGACGCGCTGAAGTAGGTAAGCTCTGGATCGATGAGT CAGCTCAAACCGCAATACAG
Downstream 100 bases:
>100_bases TGGCTGCAGCTCAGGCACCAGGGGCGCCGTCCAGAGACCTTCTGCGCTTCATCACCTGCGGTTCGGTCGATGACGGAAAA TCGACACTCATCGGACGCCT
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MTMDQVPISRSQLPAHLKRLESESIEIIREVAAELKNPVMLYSIGKDSGVMLHIAFKAFFPGRLPFPLLHVDTTWKFRDM IMFRDELAKKLGFDLLVHTNEDGLRAGINPFTSGPSLHTHVMKTEALKQALDLHGFDAAFGGARRDEEKSRAKERIFSFR AEGHVWEPRNQRPELWNLFNTRIRPGESLRVFPLSNWTEFDVWHYISLERIPVVPLYFAKERPVVWRDGTWIMVDDARFP LAPGETPQLRKVRFRTLGCYPLTGAIESAATSVEDILDEMRTTRISERQGRLIDTDEAASMEKKKKEGYF
Sequences:
>Translated_310_residues MTMDQVPISRSQLPAHLKRLESESIEIIREVAAELKNPVMLYSIGKDSGVMLHIAFKAFFPGRLPFPLLHVDTTWKFRDM IMFRDELAKKLGFDLLVHTNEDGLRAGINPFTSGPSLHTHVMKTEALKQALDLHGFDAAFGGARRDEEKSRAKERIFSFR AEGHVWEPRNQRPELWNLFNTRIRPGESLRVFPLSNWTEFDVWHYISLERIPVVPLYFAKERPVVWRDGTWIMVDDARFP LAPGETPQLRKVRFRTLGCYPLTGAIESAATSVEDILDEMRTTRISERQGRLIDTDEAASMEKKKKEGYF >Mature_309_residues TMDQVPISRSQLPAHLKRLESESIEIIREVAAELKNPVMLYSIGKDSGVMLHIAFKAFFPGRLPFPLLHVDTTWKFRDMI MFRDELAKKLGFDLLVHTNEDGLRAGINPFTSGPSLHTHVMKTEALKQALDLHGFDAAFGGARRDEEKSRAKERIFSFRA EGHVWEPRNQRPELWNLFNTRIRPGESLRVFPLSNWTEFDVWHYISLERIPVVPLYFAKERPVVWRDGTWIMVDDARFPL APGETPQLRKVRFRTLGCYPLTGAIESAATSVEDILDEMRTTRISERQGRLIDTDEAASMEKKKKEGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily
Homologues:
Organism=Escherichia coli, GI1789109, Length=308, Percent_Identity=64.6103896103896, Blast_Score=414, Evalue=1e-117,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSD_BRASO (A4YYA7)
Other databases:
- EMBL: CU234118 - RefSeq: YP_001207100.1 - ProteinModelPortal: A4YYA7 - SMR: A4YYA7 - STRING: A4YYA7 - GeneID: 5116117 - GenomeReviews: CU234118_GR - KEGG: bra:BRADO5192 - eggNOG: COG0175 - HOGENOM: HBG758022 - OMA: HYGFDAA - ProtClustDB: PRK12563 - BioCyc: BSP376:BRADO5192-MONOMER - HAMAP: MF_00064 - InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 - Gene3D: G3DSA:3.40.50.620 - PIRSF: PIRSF002936 - TIGRFAMs: TIGR02039
Pfam domain/function: PF01507 PAPS_reduct
EC number: =2.7.7.4
Molecular weight: Translated: 35771; Mature: 35639
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMDQVPISRSQLPAHLKRLESESIEIIREVAAELKNPVMLYSIGKDSGVMLHIAFKAFF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEHHC PGRLPFPLLHVDTTWKFRDMIMFRDELAKKLGFDLLVHTNEDGLRAGINPFTSGPSLHTH CCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHH VMKTEALKQALDLHGFDAAFGGARRDEEKSRAKERIFSFRAEGHVWEPRNQRPELWNLFN HHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHH TRIRPGESLRVFPLSNWTEFDVWHYISLERIPVVPLYFAKERPVVWRDGTWIMVDDARFP CCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEECCCEEEEECCCCC LAPGETPQLRKVRFRTLGCYPLTGAIESAATSVEDILDEMRTTRISERQGRLIDTDEAAS CCCCCCCHHHHHHHHEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHH MEKKKKEGYF HHHHHHCCCC >Mature Secondary Structure TMDQVPISRSQLPAHLKRLESESIEIIREVAAELKNPVMLYSIGKDSGVMLHIAFKAFF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEHHC PGRLPFPLLHVDTTWKFRDMIMFRDELAKKLGFDLLVHTNEDGLRAGINPFTSGPSLHTH CCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHH VMKTEALKQALDLHGFDAAFGGARRDEEKSRAKERIFSFRAEGHVWEPRNQRPELWNLFN HHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHH TRIRPGESLRVFPLSNWTEFDVWHYISLERIPVVPLYFAKERPVVWRDGTWIMVDDARFP CCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEECCCEEEEECCCCC LAPGETPQLRKVRFRTLGCYPLTGAIESAATSVEDILDEMRTTRISERQGRLIDTDEAAS CCCCCCCHHHHHHHHEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHH MEKKKKEGYF HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA