| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is fdsD
Identifier: 146341849
GI number: 146341849
Start: 5174141
End: 5174386
Strand: Direct
Name: fdsD
Synonym: BRADO4979
Alternate gene names: NA
Gene position: 5174141-5174386 (Clockwise)
Preceding gene: 146341848
Following gene: 146341852
Centisome position: 69.39
GC content: 63.01
Gene sequence:
>246_bases ATGTCGCATAGCAGCACCCACGACCGCCTCGTCTACATGGCCAACCAGATCGGAAAATTCTTCCAGAGCCAGGGCCGGGA AAAAGAGGTCGCCGGCGTCGCCGAGCACATCAAGAAGTTCTGGGACCCGCGCATGCTCAAGACGATCTACGCGCATCACG ACGCCGGCGGCGAAGGCCTGGACCCGGCCGTGAAGGACGCCATCGGCAAGCTGAAGGACGCGGCGGTCGCGAAGGAGAAG GCGTAA
Upstream 100 bases:
>100_bases GCTGTCGCGCGAAATGACGGCTTCGAAATATTCACCCACCCCCACCGCATCGTGGCGAGCGCGGAGCCGCGCGCGCAATC ACCTCAGACGGAAAAGCCCC
Downstream 100 bases:
>100_bases CGGGCACGATCCCGTAGCCCGCATGAGCGAAGCGACATGCGGGGCGGTGTTTCCGAACACTCGGAGCAAACTTGAACCCG GATGTCGCTACGCTCATCCG
Product: putative formate dehydrogenase subunit delta
Products: CO2; NADH
Alternate protein names: NAD-Dependent Formate Dehydrogenase; Formate Dehydrogenase Delta Subunit; NAD-Dependent Formate Dehydrogenase Delta Subunit Protein; Formate Dehydrogenase Subunit Delta
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSHSSTHDRLVYMANQIGKFFQSQGREKEVAGVAEHIKKFWDPRMLKTIYAHHDAGGEGLDPAVKDAIGKLKDAAVAKEK A
Sequences:
>Translated_81_residues MSHSSTHDRLVYMANQIGKFFQSQGREKEVAGVAEHIKKFWDPRMLKTIYAHHDAGGEGLDPAVKDAIGKLKDAAVAKEK A >Mature_80_residues SHSSTHDRLVYMANQIGKFFQSQGREKEVAGVAEHIKKFWDPRMLKTIYAHHDAGGEGLDPAVKDAIGKLKDAAVAKEKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.2.1.2
Molecular weight: Translated: 8963; Mature: 8832
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHSSTHDRLVYMANQIGKFFQSQGREKEVAGVAEHIKKFWDPRMLKTIYAHHDAGGEGL CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC DPAVKDAIGKLKDAAVAKEKA CHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHSSTHDRLVYMANQIGKFFQSQGREKEVAGVAEHIKKFWDPRMLKTIYAHHDAGGEGL CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC DPAVKDAIGKLKDAAVAKEKA CHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formate; NAD+
Specific reaction: formate + NAD+ = CO2 + NADH
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA