Click here to switch to the map view.

The map label for this gene is fdhD [H]

Identifier: 146341848

GI number: 146341848

Start: 5173315

End: 5174151

Strand: Direct

Name: fdhD [H]

Synonym: BRADO4978

Alternate gene names: 146341848

Gene position: 5173315-5174151 (Clockwise)

Preceding gene: 146341847

Following gene: 146341849

Centisome position: 69.38

GC content: 69.18

Gene sequence:

>837_bases
GTGCGCATCGCGGATCGTCTGGTCTGGCGCGACGGAGCCCTCACCGAGGGCCACCGTCGCGTGCCGGAGGAGACCGCGGT
CGCGCTGACCTACAATGGCGGCACCCAGGCCGTCATGATGGCGACGCCGCAGGATCTCCGCGACTTCGCCATCGGCTTTA
GCCTCAACGAAGGGCTTATCAAGAGCCGCGACGACATCGTCTCGCTCGATGTCGTCGAGCTCGATGACGGCATCGAGCTT
CGGATGTGGCTGCCCGACGCCCTTGCCGAACGCCTCGCCGAACGCCGCCGCAACATCGCCGGCCCCACCGGATGCGGCCT
GTGCGGCATCGACTCCCTTGCCGAAGCCGTGCGGCCCGCAGCCCATGTCCCCGCAGGACGGCGCTTCGCCCCGCGCGACA
TCATGGCCGCGCTGGCGGCGATCGAGCCGCTGCAGAAGCTCAACCACGAAACCCGCGCCGTGCATGCCGCGGCGTTCTGG
ACGCCGGCCCGCGGCATCGTGAGCCTGCGCGAGGATGTCGGCCGCCACAACGCGCTCGACAAGCTCGCCGGCCATCTGGC
GCAGACCGGGAGCGCCGCGAGCGAAGGTTTGGTCATGATGACCAGCCGCGTTTCCGTCGAGCTGGTGCAGAAGGCCGCCG
CGATGGGCGCCCCGGTGCTGGTTGCGGTGTCAGCCCCGACCGCGCTGGCGATCCGCATGGCCGAGGCCGCCGGTATCACC
CTGATTGCTGTCGCGCGAAATGACGGCTTCGAAATATTCACCCACCCCCACCGCATCGTGGCGAGCGCGGAGCCGCGCGC
GCAATCACCTCAGACGGAAAAGCCCCATGTCGCATAG

Upstream 100 bases:

>100_bases
AACGGTCCGTCGGACTGGCAGAAGGCGTATGACGAGCAGGCCCGCAACTCGCGCCGCATCGCCCCGATCGTGGAGGCGGC
GGAGTAGCATGACGGATGCA

Downstream 100 bases:

>100_bases
CAGCACCCACGACCGCCTCGTCTACATGGCCAACCAGATCGGAAAATTCTTCCAGAGCCAGGGCCGGGAAAAAGAGGTCG
CCGGCGTCGCCGAGCACATC

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MRIADRLVWRDGALTEGHRRVPEETAVALTYNGGTQAVMMATPQDLRDFAIGFSLNEGLIKSRDDIVSLDVVELDDGIEL
RMWLPDALAERLAERRRNIAGPTGCGLCGIDSLAEAVRPAAHVPAGRRFAPRDIMAALAAIEPLQKLNHETRAVHAAAFW
TPARGIVSLREDVGRHNALDKLAGHLAQTGSAASEGLVMMTSRVSVELVQKAAAMGAPVLVAVSAPTALAIRMAEAAGIT
LIAVARNDGFEIFTHPHRIVASAEPRAQSPQTEKPHVA

Sequences:

>Translated_278_residues
MRIADRLVWRDGALTEGHRRVPEETAVALTYNGGTQAVMMATPQDLRDFAIGFSLNEGLIKSRDDIVSLDVVELDDGIEL
RMWLPDALAERLAERRRNIAGPTGCGLCGIDSLAEAVRPAAHVPAGRRFAPRDIMAALAAIEPLQKLNHETRAVHAAAFW
TPARGIVSLREDVGRHNALDKLAGHLAQTGSAASEGLVMMTSRVSVELVQKAAAMGAPVLVAVSAPTALAIRMAEAAGIT
LIAVARNDGFEIFTHPHRIVASAEPRAQSPQTEKPHVA
>Mature_278_residues
MRIADRLVWRDGALTEGHRRVPEETAVALTYNGGTQAVMMATPQDLRDFAIGFSLNEGLIKSRDDIVSLDVVELDDGIEL
RMWLPDALAERLAERRRNIAGPTGCGLCGIDSLAEAVRPAAHVPAGRRFAPRDIMAALAAIEPLQKLNHETRAVHAAAFW
TPARGIVSLREDVGRHNALDKLAGHLAQTGSAASEGLVMMTSRVSVELVQKAAAMGAPVLVAVSAPTALAIRMAEAAGIT
LIAVARNDGFEIFTHPHRIVASAEPRAQSPQTEKPHVA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=239, Percent_Identity=42.6778242677824, Blast_Score=192, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29712; Mature: 29712

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIADRLVWRDGALTEGHRRVPEETAVALTYNGGTQAVMMATPQDLRDFAIGFSLNEGLI
CCCHHHHEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHCCCCCCCCC
KSRDDIVSLDVVELDDGIELRMWLPDALAERLAERRRNIAGPTGCGLCGIDSLAEAVRPA
CCCCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHH
AHVPAGRRFAPRDIMAALAAIEPLQKLNHETRAVHAAAFWTPARGIVSLREDVGRHNALD
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHCCHHHHHHHHHHHHHHHHHH
KLAGHLAQTGSAASEGLVMMTSRVSVELVQKAAAMGAPVLVAVSAPTALAIRMAEAAGIT
HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCHHHEEEHHHHCCEE
LIAVARNDGFEIFTHPHRIVASAEPRAQSPQTEKPHVA
EEEEEECCCEEEEECCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIADRLVWRDGALTEGHRRVPEETAVALTYNGGTQAVMMATPQDLRDFAIGFSLNEGLI
CCCHHHHEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHCCCCCCCCC
KSRDDIVSLDVVELDDGIELRMWLPDALAERLAERRRNIAGPTGCGLCGIDSLAEAVRPA
CCCCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHH
AHVPAGRRFAPRDIMAALAAIEPLQKLNHETRAVHAAAFWTPARGIVSLREDVGRHNALD
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHEEHHHHHCCHHHHHHHHHHHHHHHHHH
KLAGHLAQTGSAASEGLVMMTSRVSVELVQKAAAMGAPVLVAVSAPTALAIRMAEAAGIT
HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEECCCHHHEEEHHHHCCEE
LIAVARNDGFEIFTHPHRIVASAEPRAQSPQTEKPHVA
EEEEEECCCEEEEECCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA