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The map label for this gene is ctpA [H]

Identifier: 146341042

GI number: 146341042

Start: 4304565

End: 4305899

Strand: Reverse

Name: ctpA [H]

Synonym: BRADO4113

Alternate gene names: 146341042

Gene position: 4305899-4304565 (Counterclockwise)

Preceding gene: 146341051

Following gene: 146341036

Centisome position: 57.75

GC content: 65.24

Gene sequence:

>1335_bases
ATGCGGAAAAACTGGCTGTTCTTGGCGGGCACGATGACCGGCGTCTGTCTGACCCTGATGGTGTCGGGACCCGAGGGGGC
GCACCTGATCGCCCGGGCCAAGGCCGCAGCCGGAATGGGCGATACCTATTCGCAACTCAATTTGTTCGGCGCGGTATTCG
AGCGTGTGCGCGCCGACTATGTCGAGAAGCCCAGCGATCCCGCGCTGATCGAAGGCGCCATCAACGGCATGGTGTCGTCG
CTCGATCCGCATTCGCGCTACATGAACGACAAGTCCTGGCGTGACATGCAGGAGACGACGTCGGGCGAGTTTGGCGGTCT
CGGCATCGAAGTCACGATGGAGGATGGGCTCGTCAAGGTTGTCGCGCCGATCGACGATACGCCGGCGTCGAAGGCCGGTA
TCCTCTCGGGCGACTTCATCGCCAAGATTGACGGCGACAGCGTGCAAGGGCTGACGCTCGAGCAGGCGGTCGCCAAGATG
AAGGGCGGGGTCAACACCAAGACCAAGCTGACGATCATGCGCAAGGGTAAGGATGCCCCGATGGATATCACGCTGACGCG
CGAGATCATCCGGGTGCGTCCGGTGCGCTATCACACCGAAGGCGGCGATATCGGCTATATCCGCATCACCTCGTTCAACG
AGCAGACCACCGAGACGCTGCGCAAGGCGATTTCCAGCATCTCCCGGGACATCCCGCAGGAGAAGCTCGCGGGATATGTC
ATCGACCTGCGCAACAATCCGGGCGGACTGCTCGACCAGGCGGTCTCGGTGTCCAGCACGTTCCTGCCACGTGGCGAGGT
GGTCTCGACCCGCGGCCGCAATCCCGAGGAGACGCAGCGCTTCACCGCGCGCGGCGGCGACCTCACCAAGGGCAAGCCGA
TCGTCGTGCTGATCAATGGCGGCTCGGCCTCGGCGTCGGAGATCGTGGCGGGCGCGCTGCATGATCACAAGCGGGCGACG
CTGGTCGGCACGCGCTCGTTCGGCAAGGGCTCGGTGCAGACCATCATCCCGCTCGGCGCCGGCAACGGCGCGCTGGCGCT
GACCACGGCGCGCTACTACACGCCGTCTGGCCGTTCAATCCAGGCCCAGGGCATCGCGCCGGATATCGAGGTCAAGCAGG
ACGTGCCGGACGATCTGAAGGATCGTACTGAGCTGAAGGGCGAGGCGGGGATGCGCGGCCATCTGTCGGCGGCCGACGGG
ACCGAGCAGACCGGCTCGCAGTCCTATGTTCCGCCGGACGAGAAGGACGACAAGGCGCTCCACGCGGCGTTCAACGTGCT
GCGTGGCGTCACCGTGAACGCGGACGTTCGGGCCAAGGCGGCGGTTCCGAACTGA

Upstream 100 bases:

>100_bases
AAACCGGAAATGTGGTGTGAGTTCGCAGAATAATCCGTCGGCATCGCATTCGGATCTTGCGAACAGCCGGCCACCCAACA
AACGCTCGGGAAGCAAAGCA

Downstream 100 bases:

>100_bases
ACGCCGGGGCGCAGCACCCGTGGTGATCACACCCGGCGGGGCGACCTTGCGGTCGTCACGCCGTGGTTTTCGACCAGCGT
GTGCGGGCGGACATGGAGCG

Product: carboxy-terminal-processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MRKNWLFLAGTMTGVCLTLMVSGPEGAHLIARAKAAAGMGDTYSQLNLFGAVFERVRADYVEKPSDPALIEGAINGMVSS
LDPHSRYMNDKSWRDMQETTSGEFGGLGIEVTMEDGLVKVVAPIDDTPASKAGILSGDFIAKIDGDSVQGLTLEQAVAKM
KGGVNTKTKLTIMRKGKDAPMDITLTREIIRVRPVRYHTEGGDIGYIRITSFNEQTTETLRKAISSISRDIPQEKLAGYV
IDLRNNPGGLLDQAVSVSSTFLPRGEVVSTRGRNPEETQRFTARGGDLTKGKPIVVLINGGSASASEIVAGALHDHKRAT
LVGTRSFGKGSVQTIIPLGAGNGALALTTARYYTPSGRSIQAQGIAPDIEVKQDVPDDLKDRTELKGEAGMRGHLSAADG
TEQTGSQSYVPPDEKDDKALHAAFNVLRGVTVNADVRAKAAVPN

Sequences:

>Translated_444_residues
MRKNWLFLAGTMTGVCLTLMVSGPEGAHLIARAKAAAGMGDTYSQLNLFGAVFERVRADYVEKPSDPALIEGAINGMVSS
LDPHSRYMNDKSWRDMQETTSGEFGGLGIEVTMEDGLVKVVAPIDDTPASKAGILSGDFIAKIDGDSVQGLTLEQAVAKM
KGGVNTKTKLTIMRKGKDAPMDITLTREIIRVRPVRYHTEGGDIGYIRITSFNEQTTETLRKAISSISRDIPQEKLAGYV
IDLRNNPGGLLDQAVSVSSTFLPRGEVVSTRGRNPEETQRFTARGGDLTKGKPIVVLINGGSASASEIVAGALHDHKRAT
LVGTRSFGKGSVQTIIPLGAGNGALALTTARYYTPSGRSIQAQGIAPDIEVKQDVPDDLKDRTELKGEAGMRGHLSAADG
TEQTGSQSYVPPDEKDDKALHAAFNVLRGVTVNADVRAKAAVPN
>Mature_444_residues
MRKNWLFLAGTMTGVCLTLMVSGPEGAHLIARAKAAAGMGDTYSQLNLFGAVFERVRADYVEKPSDPALIEGAINGMVSS
LDPHSRYMNDKSWRDMQETTSGEFGGLGIEVTMEDGLVKVVAPIDDTPASKAGILSGDFIAKIDGDSVQGLTLEQAVAKM
KGGVNTKTKLTIMRKGKDAPMDITLTREIIRVRPVRYHTEGGDIGYIRITSFNEQTTETLRKAISSISRDIPQEKLAGYV
IDLRNNPGGLLDQAVSVSSTFLPRGEVVSTRGRNPEETQRFTARGGDLTKGKPIVVLINGGSASASEIVAGALHDHKRAT
LVGTRSFGKGSVQTIIPLGAGNGALALTTARYYTPSGRSIQAQGIAPDIEVKQDVPDDLKDRTELKGEAGMRGHLSAADG
TEQTGSQSYVPPDEKDDKALHAAFNVLRGVTVNADVRAKAAVPN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=320, Percent_Identity=31.25, Blast_Score=126, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 47291; Mature: 47291

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNWLFLAGTMTGVCLTLMVSGPEGAHLIARAKAAAGMGDTYSQLNLFGAVFERVRADY
CCCCEEEEECCHHCEEEEEEECCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VEKPSDPALIEGAINGMVSSLDPHSRYMNDKSWRDMQETTSGEFGGLGIEVTMEDGLVKV
HCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCCCCEEEEEEECCCEEEE
VAPIDDTPASKAGILSGDFIAKIDGDSVQGLTLEQAVAKMKGGVNTKTKLTIMRKGKDAP
EECCCCCCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCCEEEEEEECCCCCC
MDITLTREIIRVRPVRYHTEGGDIGYIRITSFNEQTTETLRKAISSISRDIPQEKLAGYV
EEEEEEHHHHHCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCEEE
IDLRNNPGGLLDQAVSVSSTFLPRGEVVSTRGRNPEETQRFTARGGDLTKGKPIVVLING
EEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEC
GSASASEIVAGALHDHKRATLVGTRSFGKGSVQTIIPLGAGNGALALTTARYYTPSGRSI
CCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEE
QAQGIAPDIEVKQDVPDDLKDRTELKGEAGMRGHLSAADGTEQTGSQSYVPPDEKDDKAL
EECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
HAAFNVLRGVTVNADVRAKAAVPN
HHHHHHHHCCEECCCCEEECCCCC
>Mature Secondary Structure
MRKNWLFLAGTMTGVCLTLMVSGPEGAHLIARAKAAAGMGDTYSQLNLFGAVFERVRADY
CCCCEEEEECCHHCEEEEEEECCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VEKPSDPALIEGAINGMVSSLDPHSRYMNDKSWRDMQETTSGEFGGLGIEVTMEDGLVKV
HCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCCCCEEEEEEECCCEEEE
VAPIDDTPASKAGILSGDFIAKIDGDSVQGLTLEQAVAKMKGGVNTKTKLTIMRKGKDAP
EECCCCCCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCCEEEEEEECCCCCC
MDITLTREIIRVRPVRYHTEGGDIGYIRITSFNEQTTETLRKAISSISRDIPQEKLAGYV
EEEEEEHHHHHCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCEEE
IDLRNNPGGLLDQAVSVSSTFLPRGEVVSTRGRNPEETQRFTARGGDLTKGKPIVVLING
EEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEC
GSASASEIVAGALHDHKRATLVGTRSFGKGSVQTIIPLGAGNGALALTTARYYTPSGRSI
CCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEE
QAQGIAPDIEVKQDVPDDLKDRTELKGEAGMRGHLSAADGTEQTGSQSYVPPDEKDDKAL
EECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
HAAFNVLRGVTVNADVRAKAAVPN
HHHHHHHHCCEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]