Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146341010
Identifier: 146341010
GI number: 146341010
Start: 4270107
End: 4271078
Strand: Reverse
Name: 146341010
Synonym: BRADO4081
Alternate gene names: NA
Gene position: 4271078-4270107 (Counterclockwise)
Preceding gene: 146341011
Following gene: 146341009
Centisome position: 57.28
GC content: 64.81
Gene sequence:
>972_bases ATGCGACGCCTGTTCGGCGCTGTGGCGATAGCGCTTGCCTTGCTTGTGGGATCCGCTGCCGCGGAAACCTATCCCTCGCG CGCCATCACGGTGATCGTGCCGTTCGCGGCCGGCGGTCCATCGGATGCGATGATGCGCATCCTCGCCGAGCACATGAAGC AGACGCTCGGCCAGCCCGTGCTGGTCGAGAACGTCACCGGTGCGGGTGGATCGATCGGCGTCGGGCGCGCGGTGCGCTCC AAACCGGATGGCTACACGATCAGCTTCGGTCATCTCGGTACTCACGTGGCCAACGGCGCGGTGTATCGGCTCGGCTATGA TCTCGTCGCCGATCTCGAGCCTGTCGTGCTGCTGCCGAGCAACCCGATGATCATCGTCAGCAGGAGCAATGTGCCGGCGA AGTCGTTGTCCGAGCTCCTGGCCTGGCTGAAGGCACAGCCGAATCCTGCGTCCGCCGGCACGGCCGGTAATGGCTCCGGG AGCCACATCGCCGGGCTCTATTTCGCACAGGTCACCGGCATCAAGCTGCAATTCGTGCCTTATCGCGGCACGGGCCCCGC GATGAACGACCTTGTCGGCGGCCAGATCGATCTCATCGTCGACCAGACCTCGAACGCCATCAACCAGGTCCGCGCCGGCA CGATTCGCGCCTACGCCGTCACCGACTCCAAACGACTCGATAGCGCGCCGGACATTCCGACGACCGACGAGGCAGGCCTC CCGGGCTTCCACATGACGCTCTGGTCGGGCCTCTGGCTGCCGAAAGGAGCACCGAAAGAGATCGGCGATACGCTCAATGC GGCCGCAGTCGCCGCCCTGCGGAACCCGAGTGTGGCGAATCAGTTGAGCAATCTTGGATTGCAGATCCCGGAGCCGGATC AGCAGACTCCGCAGGCGCTCGGAACCCTTCAACGGGCCGAAATCGCCAAATGGTGGCCGATGATCCGCGGGGCAGGAGTG GTGCCCGAGTAA
Upstream 100 bases:
>100_bases CCAGCCGATCGACTACACTCAGTTCTGACCGGACGGTCGGCATTGCGGCCTGGCGCCTGATCGTCTGACAACAAGGATCA GGCCGCGCGGGGAGGACGTC
Downstream 100 bases:
>100_bases GCGGGCGGTATAAATTTCCCACTCAAATGGTTGCGCAACGGCCACGAATGTTGCGGGCTCGCCACAGTTTACGAAGTTTT GGTAACAATCTCGGGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MRRLFGAVAIALALLVGSAAAETYPSRAITVIVPFAAGGPSDAMMRILAEHMKQTLGQPVLVENVTGAGGSIGVGRAVRS KPDGYTISFGHLGTHVANGAVYRLGYDLVADLEPVVLLPSNPMIIVSRSNVPAKSLSELLAWLKAQPNPASAGTAGNGSG SHIAGLYFAQVTGIKLQFVPYRGTGPAMNDLVGGQIDLIVDQTSNAINQVRAGTIRAYAVTDSKRLDSAPDIPTTDEAGL PGFHMTLWSGLWLPKGAPKEIGDTLNAAAVAALRNPSVANQLSNLGLQIPEPDQQTPQALGTLQRAEIAKWWPMIRGAGV VPE
Sequences:
>Translated_323_residues MRRLFGAVAIALALLVGSAAAETYPSRAITVIVPFAAGGPSDAMMRILAEHMKQTLGQPVLVENVTGAGGSIGVGRAVRS KPDGYTISFGHLGTHVANGAVYRLGYDLVADLEPVVLLPSNPMIIVSRSNVPAKSLSELLAWLKAQPNPASAGTAGNGSG SHIAGLYFAQVTGIKLQFVPYRGTGPAMNDLVGGQIDLIVDQTSNAINQVRAGTIRAYAVTDSKRLDSAPDIPTTDEAGL PGFHMTLWSGLWLPKGAPKEIGDTLNAAAVAALRNPSVANQLSNLGLQIPEPDQQTPQALGTLQRAEIAKWWPMIRGAGV VPE >Mature_323_residues MRRLFGAVAIALALLVGSAAAETYPSRAITVIVPFAAGGPSDAMMRILAEHMKQTLGQPVLVENVTGAGGSIGVGRAVRS KPDGYTISFGHLGTHVANGAVYRLGYDLVADLEPVVLLPSNPMIIVSRSNVPAKSLSELLAWLKAQPNPASAGTAGNGSG SHIAGLYFAQVTGIKLQFVPYRGTGPAMNDLVGGQIDLIVDQTSNAINQVRAGTIRAYAVTDSKRLDSAPDIPTTDEAGL PGFHMTLWSGLWLPKGAPKEIGDTLNAAAVAALRNPSVANQLSNLGLQIPEPDQQTPQALGTLQRAEIAKWWPMIRGAGV VPE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33678; Mature: 33678
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLFGAVAIALALLVGSAAAETYPSRAITVIVPFAAGGPSDAMMRILAEHMKQTLGQPV CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCE LVENVTGAGGSIGVGRAVRSKPDGYTISFGHLGTHVANGAVYRLGYDLVADLEPVVLLPS EEEECCCCCCCCCCCHHHHCCCCCEEEEECCCHHHHHCCEEEEECHHHHHCCCCEEEECC NPMIIVSRSNVPAKSLSELLAWLKAQPNPASAGTAGNGSGSHIAGLYFAQVTGIKLQFVP CCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHEEEEEEECEEEEEEE YRGTGPAMNDLVGGQIDLIVDQTSNAINQVRAGTIRAYAVTDSKRLDSAPDIPTTDEAGL ECCCCCHHHHHCCCEEEEEEECCHHHHHHHHCCEEEEEEECCCHHCCCCCCCCCCCCCCC PGFHMTLWSGLWLPKGAPKEIGDTLNAAAVAALRNPSVANQLSNLGLQIPEPDQQTPQAL CCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHH GTLQRAEIAKWWPMIRGAGVVPE HHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRRLFGAVAIALALLVGSAAAETYPSRAITVIVPFAAGGPSDAMMRILAEHMKQTLGQPV CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCE LVENVTGAGGSIGVGRAVRSKPDGYTISFGHLGTHVANGAVYRLGYDLVADLEPVVLLPS EEEECCCCCCCCCCCHHHHCCCCCEEEEECCCHHHHHCCEEEEECHHHHHCCCCEEEECC NPMIIVSRSNVPAKSLSELLAWLKAQPNPASAGTAGNGSGSHIAGLYFAQVTGIKLQFVP CCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHEEEEEEECEEEEEEE YRGTGPAMNDLVGGQIDLIVDQTSNAINQVRAGTIRAYAVTDSKRLDSAPDIPTTDEAGL ECCCCCHHHHHCCCEEEEEEECCHHHHHHHHCCEEEEEEECCCHHCCCCCCCCCCCCCCC PGFHMTLWSGLWLPKGAPKEIGDTLNAAAVAALRNPSVANQLSNLGLQIPEPDQQTPQAL CCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHH GTLQRAEIAKWWPMIRGAGVVPE HHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]