Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is thrC [H]
Identifier: 146341011
GI number: 146341011
Start: 4271151
End: 4272392
Strand: Reverse
Name: thrC [H]
Synonym: BRADO4082
Alternate gene names: 146341011
Gene position: 4272392-4271151 (Counterclockwise)
Preceding gene: 146341012
Following gene: 146341010
Centisome position: 57.3
GC content: 66.18
Gene sequence:
>1242_bases ATGAAATCCAGCGACAATCTCACCACCGAGCGCCCGACCTTCGTCACCCATCTCGAATGCGCGATGGTCGGCGACCATTA TCCGGCGGACCAGGTCCACAACCTCTCAAAGGCCGGCAAGCCGCTGCTGGTGCGCTACGATCTCGCGGGCGTGAAACAGG CGCTGACCAAGGACGCGCTGGCGCAGCGGCCCGCGGACATGTGGCGCTATCGCGAGCTGCTGCCGGTGCGCAAATGCCAG GACATCGTCAGCCTCGGCGAGGTCATGACGCCGCTGATCAATCTGCCGAAGCTGGCGAAGACACTCGGCGGCGGCGAGAT CATCGTCAAGGATGAGGGGCGGCTGCCGACCGGCTCGTTCAAGGCGCGCGGCCTCGTGATGGCGGTGTCGATGGGCAAGG CGCTCGGCATCACCCACATGGCGATGCCGACCAACGGCAATGCGGGGGCAGCGCTCGCGGCCTACGCGACGTCCTGCGGC ATCAAGACCACGATCTTTTGCCCGGCCGATACGCCGGAGGTGAACGTCAGCGAGATCGAGCTGCAGGGCGCGACCGTCTA TCGCGTCAACGGCCTCATTGATGATTGCGGCAAGATCGTCGGGGAGGGGAAGGCCAAGGTCGGCTGGTTCGATACCTCGA CCCTGAAGGAGCCGTACCGGATCGAAGGCAAGAAGACGATGGGCCTGGAGCTCGCCGAGCAGCTCGGCTGGGACGTGCCC GACGTGATCTTCTATCCGACCGGCGGCGGCACCGGCCTGATCGGCATGTGGAAGGGGTTCGACGAGCTGGAGAAGATCGG CTTCATCGGTTCGAAGCGCCCGCGCATGGTCGCGGTGCAAGCCTCCGGCTGCGCGCCGATGGTGCGCGCCTACGAAGCCG GCGTCGAGCACGCGACGCGCTGGGAGGATGCGCATACGATCGCCTCGGGAATCCGCGTGCCGCAGGCGGTCGGCGACTTC CTCATCCTACGCGCCGTACGCGAGAGCGGCGGCTTTGCCATTGCGGTCGATGACGACGCGATTTCGGCCGGTCTCAACGA GGTCGCGCGCGAGGAGGGGCTGCTGCTCTGCCCCGAGGGCGCTGCGACCTACGCGGCCTACAAGCAGAGCCTCGCCGACG GGCGCGTGACGAAGACCGACCGCGTCATGCTGTTCAACTGCGCCACCGGACTCAAATATCCGCTGCCGAAGGTCGAGCGC ACGCTCGATCGCCACCAGCCGATCGACTACACTCAGTTCTGA
Upstream 100 bases:
>100_bases GCAATCCAGGGGCCCAGGGTGAGACTCTGGATTGCTTCGTCGCTTCGCTCCTCGCAATGACGAACAACAAACTCCGATCG CTGCAGGAAAGAACAACAAC
Downstream 100 bases:
>100_bases CCGGACGGTCGGCATTGCGGCCTGGCGCCTGATCGTCTGACAACAAGGATCAGGCCGCGCGGGGAGGACGTCATGCGACG CCTGTTCGGCGCTGTGGCGA
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MKSSDNLTTERPTFVTHLECAMVGDHYPADQVHNLSKAGKPLLVRYDLAGVKQALTKDALAQRPADMWRYRELLPVRKCQ DIVSLGEVMTPLINLPKLAKTLGGGEIIVKDEGRLPTGSFKARGLVMAVSMGKALGITHMAMPTNGNAGAALAAYATSCG IKTTIFCPADTPEVNVSEIELQGATVYRVNGLIDDCGKIVGEGKAKVGWFDTSTLKEPYRIEGKKTMGLELAEQLGWDVP DVIFYPTGGGTGLIGMWKGFDELEKIGFIGSKRPRMVAVQASGCAPMVRAYEAGVEHATRWEDAHTIASGIRVPQAVGDF LILRAVRESGGFAIAVDDDAISAGLNEVAREEGLLLCPEGAATYAAYKQSLADGRVTKTDRVMLFNCATGLKYPLPKVER TLDRHQPIDYTQF
Sequences:
>Translated_413_residues MKSSDNLTTERPTFVTHLECAMVGDHYPADQVHNLSKAGKPLLVRYDLAGVKQALTKDALAQRPADMWRYRELLPVRKCQ DIVSLGEVMTPLINLPKLAKTLGGGEIIVKDEGRLPTGSFKARGLVMAVSMGKALGITHMAMPTNGNAGAALAAYATSCG IKTTIFCPADTPEVNVSEIELQGATVYRVNGLIDDCGKIVGEGKAKVGWFDTSTLKEPYRIEGKKTMGLELAEQLGWDVP DVIFYPTGGGTGLIGMWKGFDELEKIGFIGSKRPRMVAVQASGCAPMVRAYEAGVEHATRWEDAHTIASGIRVPQAVGDF LILRAVRESGGFAIAVDDDAISAGLNEVAREEGLLLCPEGAATYAAYKQSLADGRVTKTDRVMLFNCATGLKYPLPKVER TLDRHQPIDYTQF >Mature_413_residues MKSSDNLTTERPTFVTHLECAMVGDHYPADQVHNLSKAGKPLLVRYDLAGVKQALTKDALAQRPADMWRYRELLPVRKCQ DIVSLGEVMTPLINLPKLAKTLGGGEIIVKDEGRLPTGSFKARGLVMAVSMGKALGITHMAMPTNGNAGAALAAYATSCG IKTTIFCPADTPEVNVSEIELQGATVYRVNGLIDDCGKIVGEGKAKVGWFDTSTLKEPYRIEGKKTMGLELAEQLGWDVP DVIFYPTGGGTGLIGMWKGFDELEKIGFIGSKRPRMVAVQASGCAPMVRAYEAGVEHATRWEDAHTIASGIRVPQAVGDF LILRAVRESGGFAIAVDDDAISAGLNEVAREEGLLLCPEGAATYAAYKQSLADGRVTKTDRVMLFNCATGLKYPLPKVER TLDRHQPIDYTQF
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 44591; Mature: 44591
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSDNLTTERPTFVTHLECAMVGDHYPADQVHNLSKAGKPLLVRYDLAGVKQALTKDAL CCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH AQRPADMWRYRELLPVRKCQDIVSLGEVMTPLINLPKLAKTLGGGEIIVKDEGRLPTGSF HHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCCCCC KARGLVMAVSMGKALGITHMAMPTNGNAGAALAAYATSCGIKTTIFCPADTPEVNVSEIE CCCCEEEEEECCCHHCEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEE LQGATVYRVNGLIDDCGKIVGEGKAKVGWFDTSTLKEPYRIEGKKTMGLELAEQLGWDVP ECCCEEEEECCHHHHHHHHHCCCCCEEEEEEHHHCCCCEEECCCCCHHHHHHHHCCCCCC DVIFYPTGGGTGLIGMWKGFDELEKIGFIGSKRPRMVAVQASGCAPMVRAYEAGVEHATR CEEEEECCCCCCEEHHHCCHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH WEDAHTIASGIRVPQAVGDFLILRAVRESGGFAIAVDDDAISAGLNEVAREEGLLLCPEG HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEECCCC AATYAAYKQSLADGRVTKTDRVMLFNCATGLKYPLPKVERTLDRHQPIDYTQF CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKSSDNLTTERPTFVTHLECAMVGDHYPADQVHNLSKAGKPLLVRYDLAGVKQALTKDAL CCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH AQRPADMWRYRELLPVRKCQDIVSLGEVMTPLINLPKLAKTLGGGEIIVKDEGRLPTGSF HHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCCCCCC KARGLVMAVSMGKALGITHMAMPTNGNAGAALAAYATSCGIKTTIFCPADTPEVNVSEIE CCCCEEEEEECCCHHCEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEE LQGATVYRVNGLIDDCGKIVGEGKAKVGWFDTSTLKEPYRIEGKKTMGLELAEQLGWDVP ECCCEEEEECCHHHHHHHHHCCCCCEEEEEEHHHCCCCEEECCCCCHHHHHHHHCCCCCC DVIFYPTGGGTGLIGMWKGFDELEKIGFIGSKRPRMVAVQASGCAPMVRAYEAGVEHATR CEEEEECCCCCCEEHHHCCHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH WEDAHTIASGIRVPQAVGDFLILRAVRESGGFAIAVDDDAISAGLNEVAREEGLLLCPEG HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEECCCC AATYAAYKQSLADGRVTKTDRVMLFNCATGLKYPLPKVERTLDRHQPIDYTQF CHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]