Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340803
Identifier: 146340803
GI number: 146340803
Start: 4036549
End: 4037490
Strand: Direct
Name: 146340803
Synonym: BRADO3862
Alternate gene names: NA
Gene position: 4036549-4037490 (Clockwise)
Preceding gene: 146340802
Following gene: 146340804
Centisome position: 54.13
GC content: 68.58
Gene sequence:
>942_bases ATGGGCAAGTCCTCTCACGTCACCCGGCGCGGCCTGCTGCTCGGTGCCGCGGCACTTGCCGCCCTGCCGCGCTCGGGACG AAGCCAATCCACCGACACCGTGCGTTGGTCGGCGGGAACGGCGCCGCCCGCCAGGAGAGCGCCACCGCGCGCGACCGACT GCCACTTCCACACCTACGACGCCGGCTATTCGACGGCGCCCGGCGCGGCGCTGACGCCGCCCGACGCTTCGCCCGAGGAC TACAAGGCGCTGCAGCGCCGGATCGGCACCACGCGCGGCGTGCTCGTCACGCCGTCGACCTATGGCACCGACAACAGCCT GCAGTTGGCGTCGATGAAGGCGCTGGGGCCTGAGAATGTCCTGATGGTGGCCGTCGTCGCCGAGGATGTCCCGGACGCTG AACTGAAGCGGCTCGATGCGCTCGGCGCGCGCGGCGTGCGCTTCAACCTGCCCTTCCCCGGTCCGCTCTCGGTGGCTTCG CTCGAAAAGCTGTCGCCAAGGCTGGCCGCGCTTGGCTGGCATTGCGAGATCAACATGCGGCCGCAACAGCTCGAAGCGGC ACAGGATCTGCTGCTGCGTCTGCCATCCCGGATCGTGATCGATCACCTCGGCGCACTGCCGGCCGACGGCCTCAACAGCA ATTCCTACACAATCATTCGCAGGCTGCTCGACAAGGACAACACCTGGGTCAAGCTGTCGGGCGCCTATCTCAGCAGCCGG TCGCCCTACGCGGAGAGCGCCGCGATCACCGCGGCCTATGTCCGCGCCGCGCCCGAGCGCATGGTGTGGGGCAGCGACTG GCCGCATCCGACCCGCAAGCCCGACGACAAGCCCGATGATGCCGAGCTGTTCGACCTGATGGCGAACGCGATGCCGGATC AGGCCACCTTGCAGCGGGTCCTGGTCGACTCGCCTGCCGAGCTCTATGGATTCCCGGCATGA
Upstream 100 bases:
>100_bases ATCGCGATCGTGACCACGATCGGCGCCGGGCTGGTGCTTGTCATCAGCCGGCCGCGCAGTGCCGACACAGCGATCCTGGC TGCCACCAAGGAGGCGTGAC
Downstream 100 bases:
>100_bases GCTGGTTCGCGCCGCCCCGCCGCATCGACACCCGGATCTTCACCCGGCTGCCGGATCATTTCCGCAAAGCCCGGCGCAGC GCCTGGGCGGATGCGAACCA
Product: putative exported protein hydrolase
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Amidohydrolase Family Protein; Metal-Dependent Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; PDC Hydrolase-Like Protein; Exported Protein
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MGKSSHVTRRGLLLGAAALAALPRSGRSQSTDTVRWSAGTAPPARRAPPRATDCHFHTYDAGYSTAPGAALTPPDASPED YKALQRRIGTTRGVLVTPSTYGTDNSLQLASMKALGPENVLMVAVVAEDVPDAELKRLDALGARGVRFNLPFPGPLSVAS LEKLSPRLAALGWHCEINMRPQQLEAAQDLLLRLPSRIVIDHLGALPADGLNSNSYTIIRRLLDKDNTWVKLSGAYLSSR SPYAESAAITAAYVRAAPERMVWGSDWPHPTRKPDDKPDDAELFDLMANAMPDQATLQRVLVDSPAELYGFPA
Sequences:
>Translated_313_residues MGKSSHVTRRGLLLGAAALAALPRSGRSQSTDTVRWSAGTAPPARRAPPRATDCHFHTYDAGYSTAPGAALTPPDASPED YKALQRRIGTTRGVLVTPSTYGTDNSLQLASMKALGPENVLMVAVVAEDVPDAELKRLDALGARGVRFNLPFPGPLSVAS LEKLSPRLAALGWHCEINMRPQQLEAAQDLLLRLPSRIVIDHLGALPADGLNSNSYTIIRRLLDKDNTWVKLSGAYLSSR SPYAESAAITAAYVRAAPERMVWGSDWPHPTRKPDDKPDDAELFDLMANAMPDQATLQRVLVDSPAELYGFPA >Mature_312_residues GKSSHVTRRGLLLGAAALAALPRSGRSQSTDTVRWSAGTAPPARRAPPRATDCHFHTYDAGYSTAPGAALTPPDASPEDY KALQRRIGTTRGVLVTPSTYGTDNSLQLASMKALGPENVLMVAVVAEDVPDAELKRLDALGARGVRFNLPFPGPLSVASL EKLSPRLAALGWHCEINMRPQQLEAAQDLLLRLPSRIVIDHLGALPADGLNSNSYTIIRRLLDKDNTWVKLSGAYLSSRS PYAESAAITAAYVRAAPERMVWGSDWPHPTRKPDDKPDDAELFDLMANAMPDQATLQRVLVDSPAELYGFPA
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33725; Mature: 33593
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSSHVTRRGLLLGAAALAALPRSGRSQSTDTVRWSAGTAPPARRAPPRATDCHFHTYD CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEC AGYSTAPGAALTPPDASPEDYKALQRRIGTTRGVLVTPSTYGTDNSLQLASMKALGPENV CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEHHHHCCCCCE LMVAVVAEDVPDAELKRLDALGARGVRFNLPFPGPLSVASLEKLSPRLAALGWHCEINMR EEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCHHHHEEEEEEECCC PQQLEAAQDLLLRLPSRIVIDHLGALPADGLNSNSYTIIRRLLDKDNTWVKLSGAYLSSR HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCEECCC SPYAESAAITAAYVRAAPERMVWGSDWPHPTRKPDDKPDDAELFDLMANAMPDQATLQRV CCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH LVDSPAELYGFPA HHCCCHHHCCCCC >Mature Secondary Structure GKSSHVTRRGLLLGAAALAALPRSGRSQSTDTVRWSAGTAPPARRAPPRATDCHFHTYD CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEC AGYSTAPGAALTPPDASPEDYKALQRRIGTTRGVLVTPSTYGTDNSLQLASMKALGPENV CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEHHHHCCCCCE LMVAVVAEDVPDAELKRLDALGARGVRFNLPFPGPLSVASLEKLSPRLAALGWHCEINMR EEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCHHHHEEEEEEECCC PQQLEAAQDLLLRLPSRIVIDHLGALPADGLNSNSYTIIRRLLDKDNTWVKLSGAYLSSR HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCEECCC SPYAESAAITAAYVRAAPERMVWGSDWPHPTRKPDDKPDDAELFDLMANAMPDQATLQRV CCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH LVDSPAELYGFPA HHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA