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The map label for this gene is ttuB [H]

Identifier: 146340802

GI number: 146340802

Start: 4035210

End: 4036547

Strand: Direct

Name: ttuB [H]

Synonym: BRADO3861

Alternate gene names: 146340802

Gene position: 4035210-4036547 (Clockwise)

Preceding gene: 146340801

Following gene: 146340803

Centisome position: 54.12

GC content: 65.92

Gene sequence:

>1338_bases
ATGGCTGAAGCTGCGGCGGCGCCGAGTGCGCTCGAACGAACCACCATGCGCCGTGTATCCTGGCGCATCATGCCGTTCAT
GATGATCTGCTATCTCTTCGCGATCCTCGACCGCGGCAATGTCGGCATGGCGTCGCTGCAGATGGTGCACGATCTCGGCA
TGTCGAAGGCGGTGTTCGGCTTCGGCGCCAGCCTGTTCTTCTTCTCCTACTTCCTGATGGAAGTGCCCAGCAATCTGGCG
CTGCAGCGCTTCGGCGCGCGGCGCTGGATCGCGCGGATCATGATCACCTGGGGGATCATCTCGGCCGGCATGGCCTTCGT
CCAGGGCCAGAACTCGTTCTACGTCATGCGCTTCCTGCTCGGGGCGGCGGAGGCCGGCTTCTTCCCCGGCGTGTTGCTCT
ATCTGACCTATTGGCTGCCCGCGAACTATCGCGGTCGCCTGATCGCGCTGTTCGGCATCTCGATCCCGGCCGCGAGCTTC
ATCGGCTCGCCGCTGGGCGGCCTGCTGCTCGATCTCGACGGCCTGCTCGGCCTTCGCGGCTGGCAATGGCTGTTCATCGT
GGAAGGCGTCCCAACGGTGCTGCTCGGCCTCGTCTGTCTGGCCATTCTCACCGACCGCCCAGAGGAGGCGCGCTGGCTGC
GCGACGACGAGCGCTCCTGGCTGTGCAACGAGCTCAATCGCGAGAGGGCGGGCCGTCCGTCTGCGGCGGCCAAGACCGGC
TGGGGGTCGTTCCTGCAGCTCTTGCGCAACCCTGTCGTCTGGGCCATGGCCCTCGCCTGCTCCGGCGCCTCGGCCGCCGG
CTCGGTGCTCGGCGTCTGGCAGCCGCAGTTCCTGAAATCATTCGGTCTCACCAACCTGGAGACCGGCCTGATCAACTCGA
TTCCCTATGGCGTAGCCTGCGTGCTGATGGTGCTATGGGGCCGTCACTCCGACAAGACGGGGGAGCGCCGCTGGCACACG
GCGCTGACGCTGCTGCTGATCGCGTTCGGCTTCCTCGGCGTCTTCGTCATCCACTCCTTGATGGGCACCGTCATTCTGCT
CAGCCTCGTCCTGGTCGGTGCCTACGCCTTCAAGGGCCCGTTCTGGGCGCTGTCGTCGGGCTGGCTCGGCGCGGGATCGG
TCGCGGCCGGACTCGCGATGATCAATGCTGTGTCGAACCTGATCGGCGGCGGCCTGATGGTGAACATCTATGGCAGCGTG
CTGGATGCGACCGGCAATTACGGATTGGCACTGCTGCCGATCGCGATCGTGACCACGATCGGCGCCGGGCTGGTGCTTGT
CATCAGCCGGCCGCGCAGTGCCGACACAGCGATCCTGGCTGCCACCAAGGAGGCGTGA

Upstream 100 bases:

>100_bases
ACGTTCTGGAAGGCAAGACCTTCGACCGGCGGGCGCTGGTCAACAAGACACAGCTCAGCTTCGCCTGAGCACACAACAAC
AAACAATCTGGGAGGATAAC

Downstream 100 bases:

>100_bases
CATGGGCAAGTCCTCTCACGTCACCCGGCGCGGCCTGCTGCTCGGTGCCGCGGCACTTGCCGCCCTGCCGCGCTCGGGAC
GAAGCCAATCCACCGACACC

Product: MFS family tartrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MAEAAAAPSALERTTMRRVSWRIMPFMMICYLFAILDRGNVGMASLQMVHDLGMSKAVFGFGASLFFFSYFLMEVPSNLA
LQRFGARRWIARIMITWGIISAGMAFVQGQNSFYVMRFLLGAAEAGFFPGVLLYLTYWLPANYRGRLIALFGISIPAASF
IGSPLGGLLLDLDGLLGLRGWQWLFIVEGVPTVLLGLVCLAILTDRPEEARWLRDDERSWLCNELNRERAGRPSAAAKTG
WGSFLQLLRNPVVWAMALACSGASAAGSVLGVWQPQFLKSFGLTNLETGLINSIPYGVACVLMVLWGRHSDKTGERRWHT
ALTLLLIAFGFLGVFVIHSLMGTVILLSLVLVGAYAFKGPFWALSSGWLGAGSVAAGLAMINAVSNLIGGGLMVNIYGSV
LDATGNYGLALLPIAIVTTIGAGLVLVISRPRSADTAILAATKEA

Sequences:

>Translated_445_residues
MAEAAAAPSALERTTMRRVSWRIMPFMMICYLFAILDRGNVGMASLQMVHDLGMSKAVFGFGASLFFFSYFLMEVPSNLA
LQRFGARRWIARIMITWGIISAGMAFVQGQNSFYVMRFLLGAAEAGFFPGVLLYLTYWLPANYRGRLIALFGISIPAASF
IGSPLGGLLLDLDGLLGLRGWQWLFIVEGVPTVLLGLVCLAILTDRPEEARWLRDDERSWLCNELNRERAGRPSAAAKTG
WGSFLQLLRNPVVWAMALACSGASAAGSVLGVWQPQFLKSFGLTNLETGLINSIPYGVACVLMVLWGRHSDKTGERRWHT
ALTLLLIAFGFLGVFVIHSLMGTVILLSLVLVGAYAFKGPFWALSSGWLGAGSVAAGLAMINAVSNLIGGGLMVNIYGSV
LDATGNYGLALLPIAIVTTIGAGLVLVISRPRSADTAILAATKEA
>Mature_444_residues
AEAAAAPSALERTTMRRVSWRIMPFMMICYLFAILDRGNVGMASLQMVHDLGMSKAVFGFGASLFFFSYFLMEVPSNLAL
QRFGARRWIARIMITWGIISAGMAFVQGQNSFYVMRFLLGAAEAGFFPGVLLYLTYWLPANYRGRLIALFGISIPAASFI
GSPLGGLLLDLDGLLGLRGWQWLFIVEGVPTVLLGLVCLAILTDRPEEARWLRDDERSWLCNELNRERAGRPSAAAKTGW
GSFLQLLRNPVVWAMALACSGASAAGSVLGVWQPQFLKSFGLTNLETGLINSIPYGVACVLMVLWGRHSDKTGERRWHTA
LTLLLIAFGFLGVFVIHSLMGTVILLSLVLVGAYAFKGPFWALSSGWLGAGSVAAGLAMINAVSNLIGGGLMVNIYGSVL
DATGNYGLALLPIAIVTTIGAGLVLVISRPRSADTAILAATKEA

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=429, Percent_Identity=32.4009324009324, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI1789152, Length=322, Percent_Identity=23.6024844720497, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI2367379, Length=443, Percent_Identity=24.8306997742664, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI2367193, Length=287, Percent_Identity=23.6933797909408, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789515, Length=294, Percent_Identity=25.1700680272109, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87082320, Length=437, Percent_Identity=24.0274599542334, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17532009, Length=344, Percent_Identity=22.9651162790698, Blast_Score=68, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6322025, Length=200, Percent_Identity=28, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6321698, Length=322, Percent_Identity=24.5341614906832, Blast_Score=91, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6322612, Length=224, Percent_Identity=25.8928571428571, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6323032, Length=295, Percent_Identity=22.0338983050847, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324410, Length=154, Percent_Identity=24.025974025974, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6319876, Length=447, Percent_Identity=21.7002237136465, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24639764, Length=367, Percent_Identity=24.2506811989101, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47972; Mature: 47841

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAAAAPSALERTTMRRVSWRIMPFMMICYLFAILDRGNVGMASLQMVHDLGMSKAVFG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH
FGASLFFFSYFLMEVPSNLALQRFGARRWIARIMITWGIISAGMAFVQGQNSFYVMRFLL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GAAEAGFFPGVLLYLTYWLPANYRGRLIALFGISIPAASFIGSPLGGLLLDLDGLLGLRG
HHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHHCCCC
WQWLFIVEGVPTVLLGLVCLAILTDRPEEARWLRDDERSWLCNELNRERAGRPSAAAKTG
CEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCC
WGSFLQLLRNPVVWAMALACSGASAAGSVLGVWQPQFLKSFGLTNLETGLINSIPYGVAC
HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCHHHHH
VLMVLWGRHSDKTGERRWHTALTLLLIAFGFLGVFVIHSLMGTVILLSLVLVGAYAFKGP
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FWALSSGWLGAGSVAAGLAMINAVSNLIGGGLMVNIYGSVLDATGNYGLALLPIAIVTTI
CHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHH
GAGLVLVISRPRSADTAILAATKEA
CCCEEEEEECCCCCCCEEEEECCCC
>Mature Secondary Structure 
AEAAAAPSALERTTMRRVSWRIMPFMMICYLFAILDRGNVGMASLQMVHDLGMSKAVFG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH
FGASLFFFSYFLMEVPSNLALQRFGARRWIARIMITWGIISAGMAFVQGQNSFYVMRFLL
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GAAEAGFFPGVLLYLTYWLPANYRGRLIALFGISIPAASFIGSPLGGLLLDLDGLLGLRG
HHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHHCCCC
WQWLFIVEGVPTVLLGLVCLAILTDRPEEARWLRDDERSWLCNELNRERAGRPSAAAKTG
CEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCC
WGSFLQLLRNPVVWAMALACSGASAAGSVLGVWQPQFLKSFGLTNLETGLINSIPYGVAC
HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCCHHHHH
VLMVLWGRHSDKTGERRWHTALTLLLIAFGFLGVFVIHSLMGTVILLSLVLVGAYAFKGP
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FWALSSGWLGAGSVAAGLAMINAVSNLIGGGLMVNIYGSVLDATGNYGLALLPIAIVTTI
CHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHH
GAGLVLVISRPRSADTAILAATKEA
CCCEEEEEECCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]