Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is drp35 [H]
Identifier: 146340804
GI number: 146340804
Start: 4037487
End: 4038407
Strand: Direct
Name: drp35 [H]
Synonym: BRADO3863
Alternate gene names: 146340804
Gene position: 4037487-4038407 (Clockwise)
Preceding gene: 146340803
Following gene: 146340810
Centisome position: 54.15
GC content: 66.02
Gene sequence:
>921_bases ATGAGCTGGTTCGCGCCGCCCCGCCGCATCGACACCCGGATCTTCACCCGGCTGCCGGATCATTTCCGCAAAGCCCGGCG CAGCGCCTGGGCGGATGCGAACCAAGGTGGCCGCGCCATCGACAGCTTTCTCGAAGGCCCCTCCTTCGACCGTCAGGGCC GGCTCTACGTCACCGACATTCCGTTCGGCCGCGTCTTCCGGATCGATCCCGACGGTGCTTGGACCCTCATCACCGAGTAT GACGGCTGGCCCAACGGCCTCAAGATCCATGCCGACGGCCGCATCTTCATCACCGACTACAAGCGCGGCCTGATGCTGCT CGATCCCGGCAACGGCCAGATCACGCCGTTCCTGGAGACGGCGGCGACCGAGAGCTTCAAGGGCGTCAACGATCTGGTGT TCGGACGCTCCGGCACGCTGTACTTCACCGACCAGGGCCAGACCGGCATGCATGATCCCACCGGTCGGGTCTGGCGGCTC GGCACCGACGGCCGCCTGAGCTGCCTCGTCAACACGATCCCGAGTCCGAACGGCATCGTGGTCGATCCCCACGAGACGTT CCTGCTGGTCGCCGTCACCCGCGCCAACCAGGTCTGGCGCATTCCGTTGCCCGCGAGCGGGATCACCACCAAGGTCGGCG TGTTCGTGAACCTGCACGGTGGTCCGGGTGGCCCCGATGGTCTGGCGCTCGACCGCGACGGCAATCTCCTGATATGTCAC ACCGGCTTCGGCTCGGTGTGGCGGGTGTCGCATGTGGCCGAGCCGCTCGACCGCATCGTCTCATGCGCTGATGTCGGCAC CACCAATCTCGCCTTCGGCGGCAAGGACAATCGCAGCCTGTTCGTTACCGAGAGCCGGACCGGTTCGATTCTTCGCGCCG ATCTCGAGACCCCGGGTCTGCCGATATACTCGCACGCCTGA
Upstream 100 bases:
>100_bases ATGCCGAGCTGTTCGACCTGATGGCGAACGCGATGCCGGATCAGGCCACCTTGCAGCGGGTCCTGGTCGACTCGCCTGCC GAGCTCTATGGATTCCCGGC
Downstream 100 bases:
>100_bases GGCGGCCTAAGTCAGGCGAAGCCGAATAGCTTCGCCGGATTGCCGACCAGAATCTTGTCGCGGATCGCATCGTCCGGCGC CCAGTCGGACAGCAGGTCGA
Product: putative gluconolactonase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSWFAPPRRIDTRIFTRLPDHFRKARRSAWADANQGGRAIDSFLEGPSFDRQGRLYVTDIPFGRVFRIDPDGAWTLITEY DGWPNGLKIHADGRIFITDYKRGLMLLDPGNGQITPFLETAATESFKGVNDLVFGRSGTLYFTDQGQTGMHDPTGRVWRL GTDGRLSCLVNTIPSPNGIVVDPHETFLLVAVTRANQVWRIPLPASGITTKVGVFVNLHGGPGGPDGLALDRDGNLLICH TGFGSVWRVSHVAEPLDRIVSCADVGTTNLAFGGKDNRSLFVTESRTGSILRADLETPGLPIYSHA
Sequences:
>Translated_306_residues MSWFAPPRRIDTRIFTRLPDHFRKARRSAWADANQGGRAIDSFLEGPSFDRQGRLYVTDIPFGRVFRIDPDGAWTLITEY DGWPNGLKIHADGRIFITDYKRGLMLLDPGNGQITPFLETAATESFKGVNDLVFGRSGTLYFTDQGQTGMHDPTGRVWRL GTDGRLSCLVNTIPSPNGIVVDPHETFLLVAVTRANQVWRIPLPASGITTKVGVFVNLHGGPGGPDGLALDRDGNLLICH TGFGSVWRVSHVAEPLDRIVSCADVGTTNLAFGGKDNRSLFVTESRTGSILRADLETPGLPIYSHA >Mature_305_residues SWFAPPRRIDTRIFTRLPDHFRKARRSAWADANQGGRAIDSFLEGPSFDRQGRLYVTDIPFGRVFRIDPDGAWTLITEYD GWPNGLKIHADGRIFITDYKRGLMLLDPGNGQITPFLETAATESFKGVNDLVFGRSGTLYFTDQGQTGMHDPTGRVWRLG TDGRLSCLVNTIPSPNGIVVDPHETFLLVAVTRANQVWRIPLPASGITTKVGVFVNLHGGPGGPDGLALDRDGNLLICHT GFGSVWRVSHVAEPLDRIVSCADVGTTNLAFGGKDNRSLFVTESRTGSILRADLETPGLPIYSHA
Specific function: Exhibits lactonase activity. Acts in cells with perturbed membrane integrity and is possibly related to the membrane homeostasis [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SMP-30/CGR1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: NA
Molecular weight: Translated: 33544; Mature: 33413
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWFAPPRRIDTRIFTRLPDHFRKARRSAWADANQGGRAIDSFLEGPSFDRQGRLYVTDI CCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEC PFGRVFRIDPDGAWTLITEYDGWPNGLKIHADGRIFITDYKRGLMLLDPGNGQITPFLET CCCCEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCCEEEEECCCCCEEEEHHH AATESFKGVNDLVFGRSGTLYFTDQGQTGMHDPTGRVWRLGTDGRLSCLVNTIPSPNGIV HCHHHCCCCCCEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEE VDPHETFLLVAVTRANQVWRIPLPASGITTKVGVFVNLHGGPGGPDGLALDRDGNLLICH ECCCCEEEEEEEECCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCEEEEE TGFGSVWRVSHVAEPLDRIVSCADVGTTNLAFGGKDNRSLFVTESRTGSILRADLETPGL CCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCCC PIYSHA CEEECC >Mature Secondary Structure SWFAPPRRIDTRIFTRLPDHFRKARRSAWADANQGGRAIDSFLEGPSFDRQGRLYVTDI CCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEC PFGRVFRIDPDGAWTLITEYDGWPNGLKIHADGRIFITDYKRGLMLLDPGNGQITPFLET CCCCEEEECCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCCEEEEECCCCCEEEEHHH AATESFKGVNDLVFGRSGTLYFTDQGQTGMHDPTGRVWRLGTDGRLSCLVNTIPSPNGIV HCHHHCCCCCCEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCEE VDPHETFLLVAVTRANQVWRIPLPASGITTKVGVFVNLHGGPGGPDGLALDRDGNLLICH ECCCCEEEEEEEECCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCEEEEE TGFGSVWRVSHVAEPLDRIVSCADVGTTNLAFGGKDNRSLFVTESRTGSILRADLETPGL CCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCEEEEECCCCCC PIYSHA CEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA