Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340455
Identifier: 146340455
GI number: 146340455
Start: 3678277
End: 3679242
Strand: Direct
Name: 146340455
Synonym: BRADO3495
Alternate gene names: NA
Gene position: 3678277-3679242 (Clockwise)
Preceding gene: 146340447
Following gene: 146340466
Centisome position: 49.33
GC content: 72.36
Gene sequence:
>966_bases TTGCTCGCCGCCACATCCCTCGCGCTGGCCGTGCCCGCGCGCGCCCAGATCGGCACCATTTTCTCTGATCCGGTGCCGCG TCCGCCTGGCAACATTCCGCGCCGCGGAGAGCCGATCCCGCCGCCGCCCGACGAGGAGGAGGAGGTTCCGGAGCTGCCGC AGGGACGCGTCCTGCCGGCGCCGACCCGTCCGCCGCCGGGGCAGGGCGCTGCCTTGCCGGGGCCGGTCCAGTCGCAGCCG CTGCCGCCGCCGCCGGGAACAACTGTGCTGCCGCAGAACAATCCACCCGTTGCCGCCGCACCTCCTGGCCAGCCCGGTGC TGCGCCCGCGCAGCCGGGCCAGCGGCCAGCGCCGCCGCGCGGCGCGCCCCAGAATGCTGCGATCCCGCCGAACGGCGCGG TGCCGCAGACGCCGGCAACCATCCAACCCGGCGACGAGGTGGTGACGGAGCCGCCGGCACAGAAGATCGTGAACAAGAAG GCGAGCTTCTCCGGCCTCGACAAGATCACTGGCCGCATCATCAATTTCGACGAGGAGATCGGCGAGACCGTGCAGTTCGG CGCGCTTCGGGTGAAGACCGACGCCTGCTACACGCGCCCGGCCTCCGAGGCGGCCAACACCGACGCCTTCGTGCAGGTCG ACGAGATCACCCTGCAGGGCGAGGTGAAGCGGATTTTCTCGGGCTGGATGTTCGCCGCGAGCCCGGGCCTGCACGGCGTC GAGCACCCGATCTACGACATCTGGCTGGTCGACTGCAAAGAGCCGCAGAACACGGTGGCGAGCGCCGCGCCGGAGCAAAA GCCCGCGCCGCAGCCGCAGCCGCAGCCCGCGCAAAAGCGCCCGCCGCAGCAGAAGCAGGCTGCGCCGCGTCCGCCCGGGC CGCCGCCGCAATACCAGACCCAGCAGGTGCCTCCGCCACCCCCGCCGCCACAGGCCGGCGGTCCGTTTGGTGGCGTGTTC CGCTAA
Upstream 100 bases:
>100_bases GCGGATGGGTCATGACGCGATTTGATTGTCCCGAACCCCGATTCGCCTGATAAAGCCGCGCGAGATGCACCGAACAATCG TCCTGACCGGTATCGCGGCC
Downstream 100 bases:
>100_bases AGAATGTTCAGCCGCGCTCGGCGATGATGGCAAGCGCCTCGGCGCCCGCGAGCGGCCGGTCGGTGGGAAGCCGTGCAAAA TTGGCGGCTGGGCCCGTGAG
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MLAATSLALAVPARAQIGTIFSDPVPRPPGNIPRRGEPIPPPPDEEEEVPELPQGRVLPAPTRPPPGQGAALPGPVQSQP LPPPPGTTVLPQNNPPVAAAPPGQPGAAPAQPGQRPAPPRGAPQNAAIPPNGAVPQTPATIQPGDEVVTEPPAQKIVNKK ASFSGLDKITGRIINFDEEIGETVQFGALRVKTDACYTRPASEAANTDAFVQVDEITLQGEVKRIFSGWMFAASPGLHGV EHPIYDIWLVDCKEPQNTVASAAPEQKPAPQPQPQPAQKRPPQQKQAAPRPPGPPPQYQTQQVPPPPPPPQAGGPFGGVF R
Sequences:
>Translated_321_residues MLAATSLALAVPARAQIGTIFSDPVPRPPGNIPRRGEPIPPPPDEEEEVPELPQGRVLPAPTRPPPGQGAALPGPVQSQP LPPPPGTTVLPQNNPPVAAAPPGQPGAAPAQPGQRPAPPRGAPQNAAIPPNGAVPQTPATIQPGDEVVTEPPAQKIVNKK ASFSGLDKITGRIINFDEEIGETVQFGALRVKTDACYTRPASEAANTDAFVQVDEITLQGEVKRIFSGWMFAASPGLHGV EHPIYDIWLVDCKEPQNTVASAAPEQKPAPQPQPQPAQKRPPQQKQAAPRPPGPPPQYQTQQVPPPPPPPQAGGPFGGVF R >Mature_321_residues MLAATSLALAVPARAQIGTIFSDPVPRPPGNIPRRGEPIPPPPDEEEEVPELPQGRVLPAPTRPPPGQGAALPGPVQSQP LPPPPGTTVLPQNNPPVAAAPPGQPGAAPAQPGQRPAPPRGAPQNAAIPPNGAVPQTPATIQPGDEVVTEPPAQKIVNKK ASFSGLDKITGRIINFDEEIGETVQFGALRVKTDACYTRPASEAANTDAFVQVDEITLQGEVKRIFSGWMFAASPGLHGV EHPIYDIWLVDCKEPQNTVASAAPEQKPAPQPQPQPAQKRPPQQKQAAPRPPGPPPQYQTQQVPPPPPPPQAGGPFGGVF R
Specific function: Unknown
COG id: COG4765
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33551; Mature: 33551
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAATSLALAVPARAQIGTIFSDPVPRPPGNIPRRGEPIPPPPDEEEEVPELPQGRVLPA CCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC PTRPPPGQGAALPGPVQSQPLPPPPGTTVLPQNNPPVAAAPPGQPGAAPAQPGQRPAPPR CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCC GAPQNAAIPPNGAVPQTPATIQPGDEVVTEPPAQKIVNKKASFSGLDKITGRIINFDEEI CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHH GETVQFGALRVKTDACYTRPASEAANTDAFVQVDEITLQGEVKRIFSGWMFAASPGLHGV HHHHHHCEEEEECCHHHCCCCHHHCCCCEEEEEEEEEECHHHHHHHHHHHEECCCCCCCC EHPIYDIWLVDCKEPQNTVASAAPEQKPAPQPQPQPAQKRPPQQKQAAPRPPGPPPQYQT CCCEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCCCCCC QQVPPPPPPPQAGGPFGGVFR CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLAATSLALAVPARAQIGTIFSDPVPRPPGNIPRRGEPIPPPPDEEEEVPELPQGRVLPA CCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC PTRPPPGQGAALPGPVQSQPLPPPPGTTVLPQNNPPVAAAPPGQPGAAPAQPGQRPAPPR CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCC GAPQNAAIPPNGAVPQTPATIQPGDEVVTEPPAQKIVNKKASFSGLDKITGRIINFDEEI CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHH GETVQFGALRVKTDACYTRPASEAANTDAFVQVDEITLQGEVKRIFSGWMFAASPGLHGV HHHHHHCEEEEECCHHHCCCCHHHCCCCEEEEEEEEEECHHHHHHHHHHHEECCCCCCCC EHPIYDIWLVDCKEPQNTVASAAPEQKPAPQPQPQPAQKRPPQQKQAAPRPPGPPPQYQT CCCEEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHCCCCCCCCCCCCCC QQVPPPPPPPQAGGPFGGVFR CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA