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The map label for this gene is ntaR [H]

Identifier: 146340466

GI number: 146340466

Start: 3689309

End: 3689962

Strand: Direct

Name: ntaR [H]

Synonym: BRADO3506

Alternate gene names: 146340466

Gene position: 3689309-3689962 (Clockwise)

Preceding gene: 146340455

Following gene: 146340469

Centisome position: 49.48

GC content: 69.27

Gene sequence:

>654_bases
ATGCTGCCGATTGACCGCGATAACGTCTCACTGGGCGAGGCGGTGTTCCGCGCGCTGTGCCGGGCGCTGGAAACCGGCGT
CTATCGCTCCGGAGACCGGCTGCGCGAGGACGAGGTGGCCCAGCGGCTGAGCGTCAGCCGTACGCCGGTGCGCGAAGCGT
TCGGGAGGCTGTTGGCAAAGGGTTGGGTGCAGCCGGCCGGCGGCCGTGGTCTGATCGTTCGCAGCCTCGATCCGAGCGAG
GTTCTCGAGCTCTACGCGATGCGAGAGATACTCGAAGGTGCGGCGGCCCGGCTCGCCGCGCAATACGCCGCGCCGGCCGA
GATCGCGGCACTCCGTGACATTCACGCACGCTTCGTCGCCGCAGCCGGCGACGCGGCCGAGCTGGCGCGCCTGAACCGGC
TCATGCACGGCGCGATGCAACGGGCGGCGCGCAACCGCTATCTCGATGCCGCACTGGCCGACATGCATGTGGCGATTTCG
CTGCTGGGCACCACCACCTTTGCCGCCGAGGGTCGTCCTACAACGGCTGCCGCCGAGCATGCCGAACTGATCGAGGCGAT
CGCCGCTCGCGACCCCGACCTCGCCGAGTCGATCGCGCGCAACCATATCCGCGAAGCATTGCGGACCCGGCTCGGGATGA
GGCTGACCGCGTGA

Upstream 100 bases:

>100_bases
CGGCCTAATTTCGAATACTATTGTATACAAAAATATGCAAGGCACCTTTTGTTGGCAACGCGCCTGTGAGACAGTGCTCG
CTATGGCTTCCGATGCGCCC

Downstream 100 bases:

>100_bases
CGGATAAGCGGCAAGGTCCGTCCGCCGAGCAAACAAAAAGGCCGGCTGATGCAGCCGGCCTTCGTGGTTTGCGGCGCGAT
CCGCAGGCGCTCAGCAGGTC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLPIDRDNVSLGEAVFRALCRALETGVYRSGDRLREDEVAQRLSVSRTPVREAFGRLLAKGWVQPAGGRGLIVRSLDPSE
VLELYAMREILEGAAARLAAQYAAPAEIAALRDIHARFVAAAGDAAELARLNRLMHGAMQRAARNRYLDAALADMHVAIS
LLGTTTFAAEGRPTTAAAEHAELIEAIAARDPDLAESIARNHIREALRTRLGMRLTA

Sequences:

>Translated_217_residues
MLPIDRDNVSLGEAVFRALCRALETGVYRSGDRLREDEVAQRLSVSRTPVREAFGRLLAKGWVQPAGGRGLIVRSLDPSE
VLELYAMREILEGAAARLAAQYAAPAEIAALRDIHARFVAAAGDAAELARLNRLMHGAMQRAARNRYLDAALADMHVAIS
LLGTTTFAAEGRPTTAAAEHAELIEAIAARDPDLAESIARNHIREALRTRLGMRLTA
>Mature_217_residues
MLPIDRDNVSLGEAVFRALCRALETGVYRSGDRLREDEVAQRLSVSRTPVREAFGRLLAKGWVQPAGGRGLIVRSLDPSE
VLELYAMREILEGAAARLAAQYAAPAEIAALRDIHARFVAAAGDAAELARLNRLMHGAMQRAARNRYLDAALADMHVAIS
LLGTTTFAAEGRPTTAAAEHAELIEAIAARDPDLAESIARNHIREALRTRLGMRLTA

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789353, Length=222, Percent_Identity=26.5765765765766, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1787821, Length=197, Percent_Identity=24.3654822335025, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 23514; Mature: 23514

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPIDRDNVSLGEAVFRALCRALETGVYRSGDRLREDEVAQRLSVSRTPVREAFGRLLAK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
GWVQPAGGRGLIVRSLDPSEVLELYAMREILEGAAARLAAQYAAPAEIAALRDIHARFVA
HCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AAGDAAELARLNRLMHGAMQRAARNRYLDAALADMHVAISLLGTTTFAAEGRPTTAAAEH
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AELIEAIAARDPDLAESIARNHIREALRTRLGMRLTA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLPIDRDNVSLGEAVFRALCRALETGVYRSGDRLREDEVAQRLSVSRTPVREAFGRLLAK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
GWVQPAGGRGLIVRSLDPSEVLELYAMREILEGAAARLAAQYAAPAEIAALRDIHARFVA
HCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AAGDAAELARLNRLMHGAMQRAARNRYLDAALADMHVAISLLGTTTFAAEGRPTTAAAEH
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AELIEAIAARDPDLAESIARNHIREALRTRLGMRLTA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA