Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340342
Identifier: 146340342
GI number: 146340342
Start: 3564360
End: 3564920
Strand: Reverse
Name: 146340342
Synonym: BRADO3369
Alternate gene names: NA
Gene position: 3564920-3564360 (Counterclockwise)
Preceding gene: 146340343
Following gene: 146340339
Centisome position: 47.81
GC content: 67.02
Gene sequence:
>561_bases GTGACCAAGCTTCGTCTCGAAGGTTATGTGATCGTGTCGGCCGACGGAATGTTGGCCGACGCCCACAATGTGATGCCGGC GTCGCTCAAATTCCCCGGCGACGCCGTGTTCTTTTCCGATGCGCTCGACAGCGCCGATCTGATCGTGCACGGCCGCAACT CCTATGAGGATCAGCCGAATTCGCCGAGACGCCGGCGGCTGGTGGTGACGCGGTCGGTGGCGGGGATCGCGCCAGACACG GAGAAGCCGCGCTCCACGCTCTGGAACCCCGCGGGCGCCTCGTTCGAAGACGCCTGCGCGGCGGCCGGCGTTACGAGCGG CAGGGTGGCGATCATCGGCGGTCCCGTCGTGTTCGACATGTTCATGGACCGTTACGACACCTTCTTCCTGTCGCTGGCGC CGCACGTCACCATTCCCGACGGCGCCCCCTGCTTCACGGAGGTCGGTCCCGACCGCTCGCCGCAACAGGTGCTGACGGCG CATGGGCTCTCGCCGGCCAATCAGCTGATGCTGGACCCCGCCCACGACGTCAGCGTCACCGCCTGGAAACGCGCCGCCTG A
Upstream 100 bases:
>100_bases GAGCAGCTCGGCAAGATCGCAAAGCTGCCGACGGTGAGCCAACGGCCGGTTTCAAGCGTTGTGACGACAGTGTCCGAATG ATCGAGGATCTGTTTCGTCA
Downstream 100 bases:
>100_bases GCGGCATCGCTAGAGGTCGCCATAGGCGCTCTGCTCAGGCACTTTCGGCCCCTTGCCATAGCCGAAGATCATGAACAGCG CGCCGATGATCGACAGGTTC
Product: putative dihydrofolate reductase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTKLRLEGYVIVSADGMLADAHNVMPASLKFPGDAVFFSDALDSADLIVHGRNSYEDQPNSPRRRRLVVTRSVAGIAPDT EKPRSTLWNPAGASFEDACAAAGVTSGRVAIIGGPVVFDMFMDRYDTFFLSLAPHVTIPDGAPCFTEVGPDRSPQQVLTA HGLSPANQLMLDPAHDVSVTAWKRAA
Sequences:
>Translated_186_residues MTKLRLEGYVIVSADGMLADAHNVMPASLKFPGDAVFFSDALDSADLIVHGRNSYEDQPNSPRRRRLVVTRSVAGIAPDT EKPRSTLWNPAGASFEDACAAAGVTSGRVAIIGGPVVFDMFMDRYDTFFLSLAPHVTIPDGAPCFTEVGPDRSPQQVLTA HGLSPANQLMLDPAHDVSVTAWKRAA >Mature_185_residues TKLRLEGYVIVSADGMLADAHNVMPASLKFPGDAVFFSDALDSADLIVHGRNSYEDQPNSPRRRRLVVTRSVAGIAPDTE KPRSTLWNPAGASFEDACAAAGVTSGRVAIIGGPVVFDMFMDRYDTFFLSLAPHVTIPDGAPCFTEVGPDRSPQQVLTAH GLSPANQLMLDPAHDVSVTAWKRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19924; Mature: 19793
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLRLEGYVIVSADGMLADAHNVMPASLKFPGDAVFFSDALDSADLIVHGRNSYEDQPN CCEEEEEEEEEEECCCEEECCCCCCCCEEECCCCEEEEECCCCCCEEEEECCCCCCCCCC SPRRRRLVVTRSVAGIAPDTEKPRSTLWNPAGASFEDACAAAGVTSGRVAIIGGPVVFDM CCHHEEEEEEECCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCEEEEEECHHHHHH FMDRYDTFFLSLAPHVTIPDGAPCFTEVGPDRSPQQVLTAHGLSPANQLMLDPAHDVSVT HHHHHHHEEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHEEECCCCCCEEE AWKRAA EEECCC >Mature Secondary Structure TKLRLEGYVIVSADGMLADAHNVMPASLKFPGDAVFFSDALDSADLIVHGRNSYEDQPN CEEEEEEEEEEECCCEEECCCCCCCCEEECCCCEEEEECCCCCCEEEEECCCCCCCCCC SPRRRRLVVTRSVAGIAPDTEKPRSTLWNPAGASFEDACAAAGVTSGRVAIIGGPVVFDM CCHHEEEEEEECCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCEEEEEECHHHHHH FMDRYDTFFLSLAPHVTIPDGAPCFTEVGPDRSPQQVLTAHGLSPANQLMLDPAHDVSVT HHHHHHHEEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHEEECCCCCCEEE AWKRAA EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA