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The map label for this gene is yjeA [H]

Identifier: 146340343

GI number: 146340343

Start: 3564940

End: 3565905

Strand: Reverse

Name: yjeA [H]

Synonym: BRADO3370

Alternate gene names: 146340343

Gene position: 3565905-3564940 (Counterclockwise)

Preceding gene: 146340344

Following gene: 146340342

Centisome position: 47.82

GC content: 64.7

Gene sequence:

>966_bases
ATGCGGATTGCGGCTGGATTGGTGTTCGCAAGTTCTTTGGCGGCCTCGCTCCTGGCGTCCAGCGCGGCCTGGTCGCAGGC
GCAGCGCACGGCAGCAGCCCCGACTCCACCAGCTGCCGCTCCGGCGCCAGCCGCCGCTGCGCCGCAACCCGCCGCGCAGA
CTCAGCCGCCGCGCGCGCCCTGCATGAACCCCGAGGCGCTCGGCGTCGGCCGGACCGTCGAGATCGACACCACGGGTGGT
CCCGGCTTCGGGTTCGAGCACTTCAAGGATCTCGACTTTTTGAAGGACCACGAAGTCGTCCTGACGTTCGACGATGGTCC
GTGGCCGGAGAACACGCCCGGCGTGCTCAAGGCGCTCGCGGATCAGTGCACCACCGGCATCTTCTTCATCATCGGCAAGC
ACGCGACCTACTATCCGGAGATACTGAAGCAGGTCTACAACGCTGGCCACACGGTCGGTACGCACACCTGGTCGCACGCG
GCGCTGACCAACAAGAAGCTGACCGAAGACCAGCGCAAGGAAGAGATCGAGCTCGGTATCAGCGCCGTGAAATGGGCGCT
CGGCGGCAATTCGCCCGCGCCGTTCTTCCGCTTCCCGGCGCTGCAGCACCCGCCGGAAATGGTCACCTATCTCGGCACCC
GGAACATCGGCATTTTCTCCTGCGATCTCGACTCGTTCGATTTCAAGGCCAAGAACGCGCAGGCGGTGATCGACGTCACG
TTCAAGAAGCTCGACAAGCTCGGTAAGGGTATCATCCTGATGCACGACTTCCACAAGCACACCGCCGAGGCGCTGCCCGA
GCTGCTGCGCCGCCTGAAGGCCGGCGGCTACAAGGTGGTCGCGATGCGCGCCAAGGCGCCGGTGCAGTCGCTGCCGCAAT
ATGACGAGCAGCTCGGCAAGATCGCAAAGCTGCCGACGGTGAGCCAACGGCCGGTTTCAAGCGTTGTGACGACAGTGTCC
GAATGA

Upstream 100 bases:

>100_bases
TTTGGCGCCGGTCCGGCGGCTGGGCTAATATCCCAAGCCGGATGGTGGAGCGACTCCGGACCCCGGACGCTCCCGTTGCA
ACAACCCCCGAGGAAACACG

Downstream 100 bases:

>100_bases
TCGAGGATCTGTTTCGTCAGTGACCAAGCTTCGTCTCGAAGGTTATGTGATCGTGTCGGCCGACGGAATGTTGGCCGACG
CCCACAATGTGATGCCGGCG

Product: putative polysaccharide deacetylase chitin deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MRIAAGLVFASSLAASLLASSAAWSQAQRTAAAPTPPAAAPAPAAAAPQPAAQTQPPRAPCMNPEALGVGRTVEIDTTGG
PGFGFEHFKDLDFLKDHEVVLTFDDGPWPENTPGVLKALADQCTTGIFFIIGKHATYYPEILKQVYNAGHTVGTHTWSHA
ALTNKKLTEDQRKEEIELGISAVKWALGGNSPAPFFRFPALQHPPEMVTYLGTRNIGIFSCDLDSFDFKAKNAQAVIDVT
FKKLDKLGKGIILMHDFHKHTAEALPELLRRLKAGGYKVVAMRAKAPVQSLPQYDEQLGKIAKLPTVSQRPVSSVVTTVS
E

Sequences:

>Translated_321_residues
MRIAAGLVFASSLAASLLASSAAWSQAQRTAAAPTPPAAAPAPAAAAPQPAAQTQPPRAPCMNPEALGVGRTVEIDTTGG
PGFGFEHFKDLDFLKDHEVVLTFDDGPWPENTPGVLKALADQCTTGIFFIIGKHATYYPEILKQVYNAGHTVGTHTWSHA
ALTNKKLTEDQRKEEIELGISAVKWALGGNSPAPFFRFPALQHPPEMVTYLGTRNIGIFSCDLDSFDFKAKNAQAVIDVT
FKKLDKLGKGIILMHDFHKHTAEALPELLRRLKAGGYKVVAMRAKAPVQSLPQYDEQLGKIAKLPTVSQRPVSSVVTTVS
E
>Mature_321_residues
MRIAAGLVFASSLAASLLASSAAWSQAQRTAAAPTPPAAAPAPAAAAPQPAAQTQPPRAPCMNPEALGVGRTVEIDTTGG
PGFGFEHFKDLDFLKDHEVVLTFDDGPWPENTPGVLKALADQCTTGIFFIIGKHATYYPEILKQVYNAGHTVGTHTWSHA
ALTNKKLTEDQRKEEIELGISAVKWALGGNSPAPFFRFPALQHPPEMVTYLGTRNIGIFSCDLDSFDFKAKNAQAVIDVT
FKKLDKLGKGIILMHDFHKHTAEALPELLRRLKAGGYKVVAMRAKAPVQSLPQYDEQLGKIAKLPTVSQRPVSSVVTTVS
E

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=170, Percent_Identity=32.3529411764706, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 34518; Mature: 34518

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAAGLVFASSLAASLLASSAAWSQAQRTAAAPTPPAAAPAPAAAAPQPAAQTQPPRAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CMNPEALGVGRTVEIDTTGGPGFGFEHFKDLDFLKDHEVVLTFDDGPWPENTPGVLKALA
CCCCHHCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHH
DQCTTGIFFIIGKHATYYPEILKQVYNAGHTVGTHTWSHAALTNKKLTEDQRKEEIELGI
HHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH
SAVKWALGGNSPAPFFRFPALQHPPEMVTYLGTRNIGIFSCDLDSFDFKAKNAQAVIDVT
HHHHHCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEHHH
FKKLDKLGKGIILMHDFHKHTAEALPELLRRLKAGGYKVVAMRAKAPVQSLPQYDEQLGK
HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHH
IAKLPTVSQRPVSSVVTTVSE
HHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRIAAGLVFASSLAASLLASSAAWSQAQRTAAAPTPPAAAPAPAAAAPQPAAQTQPPRAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CMNPEALGVGRTVEIDTTGGPGFGFEHFKDLDFLKDHEVVLTFDDGPWPENTPGVLKALA
CCCCHHCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHH
DQCTTGIFFIIGKHATYYPEILKQVYNAGHTVGTHTWSHAALTNKKLTEDQRKEEIELGI
HHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH
SAVKWALGGNSPAPFFRFPALQHPPEMVTYLGTRNIGIFSCDLDSFDFKAKNAQAVIDVT
HHHHHCCCCCCCCCCEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEHHH
FKKLDKLGKGIILMHDFHKHTAEALPELLRRLKAGGYKVVAMRAKAPVQSLPQYDEQLGK
HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHH
IAKLPTVSQRPVSSVVTTVSE
HHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]