Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340339
Identifier: 146340339
GI number: 146340339
Start: 3559166
End: 3561211
Strand: Reverse
Name: 146340339
Synonym: BRADO3366
Alternate gene names: NA
Gene position: 3561211-3559166 (Counterclockwise)
Preceding gene: 146340342
Following gene: 146340338
Centisome position: 47.76
GC content: 67.99
Gene sequence:
>2046_bases TTGGGCGGAGTATTGGGCGGAGCACATCGAATGAAACGTATCCTGATCGCCACCGTCGCCGTGGTCGTCCTCGGCATCGC CGGGCTCGTCGGCGTCCCCTGGTACGCCCAGAGTCGCGCCGAGCGTGAGGTCGAGGCCAGCTTCGCCCAGATTCGGCAGA ATGGCGCCACCGCGAGCCACGGCAAGGTCGCCTTCGATCTGTGGTCGCGCAAGCTGACAATCGCCGATGTCAAGGTCGAG TCGGCCGCGCAGCCGCCGGCGAGCATCAGCTTCGGTGCGATCACGGCGATGGGGTTGAGCCAGCCCGATGGCGACCACGT TGCCGCCAGCAGCATCGAGCTCAGCGACGTCGCGATGAGCGGTCAGATGCCCGGCCCATCGGCCATCCGCCTCAGCTACA AGCTGCCGCAGATCGTGCTGAAGGATTATGCCGGCCCGGTTCGGTTCGCCGCGCTTCCGGCGGGCAGCGGTCCGCTCGAG ACGTACCGCACGCTGATGCAACAATTTGCGACGATCAGCGCGAGTTCGATCATCCTTCCGCGTGCGGAAGGCACCATGGA GGGCGGACCGGCCGCCGCCGCTCCCGCGGAATTCACCTATTCCGGCTTCACGATCGACAACATCAAGGACGGCCGCATCG CCAGCTACAAGCTCGACGGACTGGCGTTCACGATGAGCATGCAGCAGCCGGCCAATAAACTCGCGGCGGGCGCCGGGCAG CCGGGCAGGATCGAGAAGCTGCAGGGTCGCGTCACCGACATCGTCCATCACGACATCGACGCCAACGCGATGCTCGCCGT GCTCAGCCCCGAGGCCGCCAAGGACGATCGCGTCTACCGGGTCTATGGCCGGGTGACGGCGGGCGCCTACGAGGTCAACT CGGATTCCGGCGTGCGGATGCGCATGGAGGGCATCTCTGCCGACGAGTTCAGCGTGCGGCCCTCGCGCCTGCAGCTGCCG GCTTTGTTCGCAGCCCTGCCCGCCAGCACCGCTGTCGAGCCCACGCCGGAGCAGGCCCGCGACATCATGGAGAAGGTCGC CGGCGTCTATGAAGGCATTGCACTGAAGAACGCCGAGATGCGCGGCCTCGCGATCGAGACGCCGCAAGGACCTGTGAAGC TGGCGGCGGTCCGTTTCGACTTGCGCGACGGCAAGGGGGAGGTTGCGGTCGAAGGCTTCGACGGTCCTTCGCCGAACGGG CCCATCAAGCTCGGCCGCTTTGCGCTCAAGGGATTCGACATCGCGAGCCTGTTGCGCTTCAGCGCCAAGTTCGCCGCGCA GGGCGCCAAGCCGGCGCCGGCCGAGGCGGTCGTGCTGTTCAAGCTGCTCGAGGGCATCGAGCTGAAAGGGCTGACGGCGC CCTACAAGGCCGGCGACAAGCCGGTGCAGATCGACAATGTCAGCCTCGACTGGGGCCAGTTCGTCGGCCCCATCCCGACC AAGGCGCGCCTCGTCGCCAAGATGGCCGGACCGCTCGATCCATCGAATCCGGCGCTGCTGCCGCTCCTGGTCGCCGGCAT CGACAGCGCCGCCGTCGATGCCGATCTCGGGCTCGGTTGGACCGAGAGCGCGGCGACGTTTGCGCTGGAGCCGTTCAAGC TCGAGGTCAGCAATCTCGTCGCGGCCTCCGCCAATTTGTCGCTGGCCCAGGTGCCGCGCGAGGTGTTCACGACCGACCTG CAGCAGGCGACGACGGCGGCGGCGCAGATCGAGGCCGGCGGTCTCGGCCTGAGCGTGCGCGATCTCGGCGTGGTGGACGT GCTCGTTGCCAACTACGCGCGCGGTCATGCCATCCCCCGCGACGCCGCCCGCAAGGCGCTGGTCGACAGCATCAAGGCGA TCGGCGCCCAGGTCGCGACCGGCAATGCCGATGTCGCCACTGCCGTCGACGCGTTCAGCCGCTTCGTCGAGAGGCCGCGC CAGACCTTCACGCTAAAGCTCTCGCCGCGCGCCAAGGTCCCCGCCATGCAGCTCGCCCAGCTCATCGCCACCGATCCGCC GAGCGCGCTGGCGCAGTTCAAGATCGAGGCGCAGACGGCGCCGTGA
Upstream 100 bases:
>100_bases ATGTCGGCAGGCATCCCCGACCAGCAATTTTCCTTTTCGCAGAAGCACATCCCTACTCCATCGCATTCATCCAGACCATC CTCATCCCGCTGCCTAAGCC
Downstream 100 bases:
>100_bases GTTCCGCCAGAATCGGGGCGCGCGCGAGCCAGGACGTAAGTCCACGCCTCTCTCTTCCGTCATTCCGGGCTCGCGCTGCG CGCGCCACGGAATGACGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 681; Mature: 680
Protein sequence:
>681_residues MGGVLGGAHRMKRILIATVAVVVLGIAGLVGVPWYAQSRAEREVEASFAQIRQNGATASHGKVAFDLWSRKLTIADVKVE SAAQPPASISFGAITAMGLSQPDGDHVAASSIELSDVAMSGQMPGPSAIRLSYKLPQIVLKDYAGPVRFAALPAGSGPLE TYRTLMQQFATISASSIILPRAEGTMEGGPAAAAPAEFTYSGFTIDNIKDGRIASYKLDGLAFTMSMQQPANKLAAGAGQ PGRIEKLQGRVTDIVHHDIDANAMLAVLSPEAAKDDRVYRVYGRVTAGAYEVNSDSGVRMRMEGISADEFSVRPSRLQLP ALFAALPASTAVEPTPEQARDIMEKVAGVYEGIALKNAEMRGLAIETPQGPVKLAAVRFDLRDGKGEVAVEGFDGPSPNG PIKLGRFALKGFDIASLLRFSAKFAAQGAKPAPAEAVVLFKLLEGIELKGLTAPYKAGDKPVQIDNVSLDWGQFVGPIPT KARLVAKMAGPLDPSNPALLPLLVAGIDSAAVDADLGLGWTESAATFALEPFKLEVSNLVAASANLSLAQVPREVFTTDL QQATTAAAQIEAGGLGLSVRDLGVVDVLVANYARGHAIPRDAARKALVDSIKAIGAQVATGNADVATAVDAFSRFVERPR QTFTLKLSPRAKVPAMQLAQLIATDPPSALAQFKIEAQTAP
Sequences:
>Translated_681_residues MGGVLGGAHRMKRILIATVAVVVLGIAGLVGVPWYAQSRAEREVEASFAQIRQNGATASHGKVAFDLWSRKLTIADVKVE SAAQPPASISFGAITAMGLSQPDGDHVAASSIELSDVAMSGQMPGPSAIRLSYKLPQIVLKDYAGPVRFAALPAGSGPLE TYRTLMQQFATISASSIILPRAEGTMEGGPAAAAPAEFTYSGFTIDNIKDGRIASYKLDGLAFTMSMQQPANKLAAGAGQ PGRIEKLQGRVTDIVHHDIDANAMLAVLSPEAAKDDRVYRVYGRVTAGAYEVNSDSGVRMRMEGISADEFSVRPSRLQLP ALFAALPASTAVEPTPEQARDIMEKVAGVYEGIALKNAEMRGLAIETPQGPVKLAAVRFDLRDGKGEVAVEGFDGPSPNG PIKLGRFALKGFDIASLLRFSAKFAAQGAKPAPAEAVVLFKLLEGIELKGLTAPYKAGDKPVQIDNVSLDWGQFVGPIPT KARLVAKMAGPLDPSNPALLPLLVAGIDSAAVDADLGLGWTESAATFALEPFKLEVSNLVAASANLSLAQVPREVFTTDL QQATTAAAQIEAGGLGLSVRDLGVVDVLVANYARGHAIPRDAARKALVDSIKAIGAQVATGNADVATAVDAFSRFVERPR QTFTLKLSPRAKVPAMQLAQLIATDPPSALAQFKIEAQTAP >Mature_680_residues GGVLGGAHRMKRILIATVAVVVLGIAGLVGVPWYAQSRAEREVEASFAQIRQNGATASHGKVAFDLWSRKLTIADVKVES AAQPPASISFGAITAMGLSQPDGDHVAASSIELSDVAMSGQMPGPSAIRLSYKLPQIVLKDYAGPVRFAALPAGSGPLET YRTLMQQFATISASSIILPRAEGTMEGGPAAAAPAEFTYSGFTIDNIKDGRIASYKLDGLAFTMSMQQPANKLAAGAGQP GRIEKLQGRVTDIVHHDIDANAMLAVLSPEAAKDDRVYRVYGRVTAGAYEVNSDSGVRMRMEGISADEFSVRPSRLQLPA LFAALPASTAVEPTPEQARDIMEKVAGVYEGIALKNAEMRGLAIETPQGPVKLAAVRFDLRDGKGEVAVEGFDGPSPNGP IKLGRFALKGFDIASLLRFSAKFAAQGAKPAPAEAVVLFKLLEGIELKGLTAPYKAGDKPVQIDNVSLDWGQFVGPIPTK ARLVAKMAGPLDPSNPALLPLLVAGIDSAAVDADLGLGWTESAATFALEPFKLEVSNLVAASANLSLAQVPREVFTTDLQ QATTAAAQIEAGGLGLSVRDLGVVDVLVANYARGHAIPRDAARKALVDSIKAIGAQVATGNADVATAVDAFSRFVERPRQ TFTLKLSPRAKVPAMQLAQLIATDPPSALAQFKIEAQTAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71311; Mature: 71179
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGVLGGAHRMKRILIATVAVVVLGIAGLVGVPWYAQSRAEREVEASFAQIRQNGATASH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC GKVAFDLWSRKLTIADVKVESAAQPPASISFGAITAMGLSQPDGDHVAASSIELSDVAMS CCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEECCEEEHHHHCC GQMPGPSAIRLSYKLPQIVLKDYAGPVRFAALPAGSGPLETYRTLMQQFATISASSIILP CCCCCCCEEEEEECCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE RAEGTMEGGPAAAAPAEFTYSGFTIDNIKDGRIASYKLDGLAFTMSMQQPANKLAAGAGQ CCCCCCCCCCCCCCCCCEEECCEEECCCCCCCEEEEEECCEEEEEECHHHHHHHHCCCCC PGRIEKLQGRVTDIVHHDIDANAMLAVLSPEAAKDDRVYRVYGRVTAGAYEVNSDSGVRM CCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECEEEECCCCCCEE RMEGISADEFSVRPSRLQLPALFAALPASTAVEPTPEQARDIMEKVAGVYEGIALKNAEM EEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCC RGLAIETPQGPVKLAAVRFDLRDGKGEVAVEGFDGPSPNGPIKLGRFALKGFDIASLLRF CCEEEECCCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHH SAKFAAQGAKPAPAEAVVLFKLLEGIELKGLTAPYKAGDKPVQIDNVSLDWGQFVGPIPT HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHCCCCCH KARLVAKMAGPLDPSNPALLPLLVAGIDSAAVDADLGLGWTESAATFALEPFKLEVSNLV HHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEECCCEEEHHHHH AASANLSLAQVPREVFTTDLQQATTAAAQIEAGGLGLSVRDLGVVDVLVANYARGHAIPR HHCCCCHHHHCCHHHHHHHHHHHHHHHHEEECCCCCEEHHHCCHHHHHHHHHHCCCCCCH DAARKALVDSIKAIGAQVATGNADVATAVDAFSRFVERPRQTFTLKLSPRAKVPAMQLAQ HHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHH LIATDPPSALAQFKIEAQTAP HHHCCCCHHHHEEEEEECCCC >Mature Secondary Structure GGVLGGAHRMKRILIATVAVVVLGIAGLVGVPWYAQSRAEREVEASFAQIRQNGATASH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC GKVAFDLWSRKLTIADVKVESAAQPPASISFGAITAMGLSQPDGDHVAASSIELSDVAMS CCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEECCEEEHHHHCC GQMPGPSAIRLSYKLPQIVLKDYAGPVRFAALPAGSGPLETYRTLMQQFATISASSIILP CCCCCCCEEEEEECCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE RAEGTMEGGPAAAAPAEFTYSGFTIDNIKDGRIASYKLDGLAFTMSMQQPANKLAAGAGQ CCCCCCCCCCCCCCCCCEEECCEEECCCCCCCEEEEEECCEEEEEECHHHHHHHHCCCCC PGRIEKLQGRVTDIVHHDIDANAMLAVLSPEAAKDDRVYRVYGRVTAGAYEVNSDSGVRM CCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECEEEECCCCCCEE RMEGISADEFSVRPSRLQLPALFAALPASTAVEPTPEQARDIMEKVAGVYEGIALKNAEM EEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCC RGLAIETPQGPVKLAAVRFDLRDGKGEVAVEGFDGPSPNGPIKLGRFALKGFDIASLLRF CCEEEECCCCCEEEEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHH SAKFAAQGAKPAPAEAVVLFKLLEGIELKGLTAPYKAGDKPVQIDNVSLDWGQFVGPIPT HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHCCCCCH KARLVAKMAGPLDPSNPALLPLLVAGIDSAAVDADLGLGWTESAATFALEPFKLEVSNLV HHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHCCCCCCCCCCCCCCEEEECCCEEEHHHHH AASANLSLAQVPREVFTTDLQQATTAAAQIEAGGLGLSVRDLGVVDVLVANYARGHAIPR HHCCCCHHHHCCHHHHHHHHHHHHHHHHEEECCCCCEEHHHCCHHHHHHHHHHCCCCCCH DAARKALVDSIKAIGAQVATGNADVATAVDAFSRFVERPRQTFTLKLSPRAKVPAMQLAQ HHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHH LIATDPPSALAQFKIEAQTAP HHHCCCCHHHHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA