| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is surA [H]
Identifier: 146340301
GI number: 146340301
Start: 3519554
End: 3520417
Strand: Reverse
Name: surA [H]
Synonym: BRADO3324
Alternate gene names: 146340301
Gene position: 3520417-3519554 (Counterclockwise)
Preceding gene: 146340302
Following gene: 146340300
Centisome position: 47.21
GC content: 61.81
Gene sequence:
>864_bases ATGACATCGGCTCACGCCCAGAGCATCGTCGTCATGGTGAACGGCGATCCCATCACCGATTACGACATCGAGCAGCGCAG CAAGCTGAATTTCCTGAGCACACACAAGCAGCAGAGCCGCCAGGAGGTTCTCAACGAACTGATCGACGACAAGGTGAAGA TCAAGGAAGGCAAGAAGTTCGGCGTCGAGCCATCCTCATCCGACATCGACCAGTCCTTCGCCGGCATGGGCTCGCGCATG CGCCTCAACGCCGAGCAGCTGACACGGTCGCTCGAGAGCCAGGGCGTGCGGCCGGAGACGCTCAAGCAGCGCATCAAGGC CGAGATCGTCTGGACCAGCCTTGTGCGCGGCCGCTACAAGGAACGCCTGTTCGTCTCGGACAAGGACGTCGCTGCAGCGG TCGCTGCCGCCGGCGGCGACACCGGTCAGCAGGGCCAATCCTTCGAATACAAGATGCAGCCTGTGGTTCTCATCGTGCCG AATTCGTCGAACCAGGGCGCGATGGAAATCCGGCAGAAGGAGGCCGAGGCGCTGCGTGGACGGGTGCAGAGCTGCGCGGA CGCCAACAACATCTCCAGGACGACGGCGAATGCCGTCGTCAAGGAGATCGTCGTCAAGACCTCCGCCGATATCCCGCCTA ACCTGCGCAAGCTGCTCGACGACACCCCGATCGGTCACCTGACCCCGCCAGAAGCCACCAAGCAGGGGATTCAGATGGTC GCGCTCTGCGCGCGTACACCCACCACGGTCGATACGCCGAAGGCGCGCGAGATCAAGGAACAGATGTACGCCAAGAAATA TGAGGCGACGTCGAAGGCCTATCTGCAGGAAGTCCGCAAGGCGGCGATGATCGAATATCGCTGA
Upstream 100 bases:
>100_bases TTATTGCGAACAGCGAAGCTCAGTCATGACGTCTCCGTTCCTTCCCCGCCTCTTGATCCTGCCCCTCTGCGCGGTCGCTG CGCTGGCCTGGGGCGCTCCA
Downstream 100 bases:
>100_bases TGACGATTCCCCTCGCGCTCACGCTGGGCGAGCCAGCAGGCATTGGACCGGACATCACCCTGCTGGCCTGGCTGCGTCGC GCCGAGCTCGGTTTGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTSAHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKFGVEPSSSDIDQSFAGMGSRM RLNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYKERLFVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVP NSSNQGAMEIRQKEAEALRGRVQSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMV ALCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEYR
Sequences:
>Translated_287_residues MTSAHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKFGVEPSSSDIDQSFAGMGSRM RLNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYKERLFVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVP NSSNQGAMEIRQKEAEALRGRVQSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMV ALCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEYR >Mature_286_residues TSAHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKFGVEPSSSDIDQSFAGMGSRMR LNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYKERLFVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVPN SSNQGAMEIRQKEAEALRGRVQSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMVA LCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEYR
Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PpiC domains [H]
Homologues:
None
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000297 - InterPro: IPR023034 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 31839; Mature: 31707
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKF CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC GVEPSSSDIDQSFAGMGSRMRLNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYK CCCCCCCHHHHHHHCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ERLFVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVPNSSNQGAMEIRQKEAEALRG HHEECCCCHHHHHHHHCCCCCCCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHHHHHHH RVQSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMV HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH ALCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEYR HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSAHAQSIVVMVNGDPITDYDIEQRSKLNFLSTHKQQSRQEVLNELIDDKVKIKEGKKF CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC GVEPSSSDIDQSFAGMGSRMRLNAEQLTRSLESQGVRPETLKQRIKAEIVWTSLVRGRYK CCCCCCCHHHHHHHCCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ERLFVSDKDVAAAVAAAGGDTGQQGQSFEYKMQPVVLIVPNSSNQGAMEIRQKEAEALRG HHEECCCCHHHHHHHHCCCCCCCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHHHHHHH RVQSCADANNISRTTANAVVKEIVVKTSADIPPNLRKLLDDTPIGHLTPPEATKQGIQMV HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH ALCARTPTTVDTPKAREIKEQMYAKKYEATSKAYLQEVRKAAMIEYR HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA