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The map label for this gene is nodN [H]

Identifier: 146340127

GI number: 146340127

Start: 3341274

End: 3341750

Strand: Direct

Name: nodN [H]

Synonym: BRADO3142

Alternate gene names: 146340127

Gene position: 3341274-3341750 (Clockwise)

Preceding gene: 146340126

Following gene: 146340128

Centisome position: 44.81

GC content: 61.22

Gene sequence:

>477_bases
ATGAACAAGATCTGGAATAAGCCGCCGATTTCACTCGAAGCCTATCAGGCCATGGTTGGCCAGGAGATCGGGGTCTCGTC
ATGGCACGTGCTCGATCAGCGGCGCATCGATACCTATGCCGACGTGATCGAGGATCATCAGTTCATCCACGTCGATCCGG
AAGCAGCCAAGGCGACCCCGTTCGGCACCACCATCGCGCACGGCTTCCTGACGATGTCGCTGCTGTCGGTGATGTCCTAC
GAGGTCATGCCGGCGATCGAGGGCACGGCGATGGGCGTGAACTACGGTTTCGACAAGCTGCGCTTCATCTCGCCGGTGAG
ATCGGGCAAGCGCGTGCGCGGCCGCTTCGTGCTCGCCGAAGCCACGCTACGCAAGCCGAAGGAGCTGCAGTCGCGGACCA
ACGTCACGGTCGAGATCGAGGGCGAGGACAAGCCCGCACTGGTCGCCGACTGGATCGGACTGATCTATTTGAGCTAA

Upstream 100 bases:

>100_bases
GAGGATAACCGCACGGATCATCTGCGCGGCACGGAGTTCAGGGAAGAGGATTTCCCGGAATTGAAGACACGGCCATCCGG
GCACGAGGTGTAGGGAACGC

Downstream 100 bases:

>100_bases
CAATCGTCGTCACAACCTACCTTCGTCATTGCCGGGCTTGACCCGGCGATCCATCCACTTCTGAAAATGGGATGGATGCC
GGGTCAAGCCCGGGCATGAC

Product: nodN-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MNKIWNKPPISLEAYQAMVGQEIGVSSWHVLDQRRIDTYADVIEDHQFIHVDPEAAKATPFGTTIAHGFLTMSLLSVMSY
EVMPAIEGTAMGVNYGFDKLRFISPVRSGKRVRGRFVLAEATLRKPKELQSRTNVTVEIEGEDKPALVADWIGLIYLS

Sequences:

>Translated_158_residues
MNKIWNKPPISLEAYQAMVGQEIGVSSWHVLDQRRIDTYADVIEDHQFIHVDPEAAKATPFGTTIAHGFLTMSLLSVMSY
EVMPAIEGTAMGVNYGFDKLRFISPVRSGKRVRGRFVLAEATLRKPKELQSRTNVTVEIEGEDKPALVADWIGLIYLS
>Mature_158_residues
MNKIWNKPPISLEAYQAMVGQEIGVSSWHVLDQRRIDTYADVIEDHQFIHVDPEAAKATPFGTTIAHGFLTMSLLSVMSY
EVMPAIEGTAMGVNYGFDKLRFISPVRSGKRVRGRFVLAEATLRKPKELQSRTNVTVEIEGEDKPALVADWIGLIYLS

Specific function: Involved in the production of the root hair deformation (HAD) factor specifically on medicago [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the R.leguminosarum biovar viciae counterpart [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 17694; Mature: 17694

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIWNKPPISLEAYQAMVGQEIGVSSWHVLDQRRIDTYADVIEDHQFIHVDPEAAKATP
CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
FGTTIAHGFLTMSLLSVMSYEVMPAIEGTAMGVNYGFDKLRFISPVRSGKRVRGRFVLAE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCEECCEEEEEH
ATLRKPKELQSRTNVTVEIEGEDKPALVADWIGLIYLS
HHHCCCHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNKIWNKPPISLEAYQAMVGQEIGVSSWHVLDQRRIDTYADVIEDHQFIHVDPEAAKATP
CCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
FGTTIAHGFLTMSLLSVMSYEVMPAIEGTAMGVNYGFDKLRFISPVRSGKRVRGRFVLAE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCEECCEEEEEH
ATLRKPKELQSRTNVTVEIEGEDKPALVADWIGLIYLS
HHHCCCHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909418; 11481432 [H]