| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339403
Identifier: 146339403
GI number: 146339403
Start: 2543983
End: 2545119
Strand: Direct
Name: 146339403
Synonym: BRADO2388
Alternate gene names: NA
Gene position: 2543983-2545119 (Clockwise)
Preceding gene: 146339395
Following gene: 146339408
Centisome position: 34.12
GC content: 65.26
Gene sequence:
>1137_bases ATGACGAGGAGCAGACGCGAAGTGATACAGCTCGCAGCAGCAGGGGCCGTTGCCGGCGTCACCACCGGCGCTGCCCAAGC GCAGGCGCCGGACGGCGCCGTGATCGACGCCAACATGCATTGGCTTCCCGAGGATCTGTTCAGCGACGAGAGGCTGCTGA CGGCCTTCGCCGGCGCGGTGCCGCGTGAATACGGCATTCACGCCAAGGTCATGCCCGTTCCCGGCAAGCCCCTGCGCCAG ATCGTGATCGAGCAGCCGCTGGGCTACGAGGTGCTGAACTACGCCGAGAACCAGTACAACGCGGCCGGGCAGATCGCCGA CATGGACCAGGCGGGCATCGCGCAGGCGATCCTGCGGCTGCCGTGCTGGCAGGAATGGCTGCCGCTCGAACTGTGCCGAC GGGTCAATGACGGGCTCGCTGCGCATCTCAAGCGCCATCCGGGCCGCTTCCAGGCGCTGGCCGTCGTGCCGCCTTGGGGA ACGCCTGATGCGCTGAAGGAGGTCGAGCGCTGCGTCCATGATCTCGGCTTTGTCGGCGTGCAGATGGCCGCGCATTACGG CCAGCTCTATCTGGACGACCCCGCGTTCAAGCCGCATCTGAAATTCCTCGATCAACTCGGCGTCCCCGTGGTGGTGCATC ACACGCCGCTGCCGGTCGATTACGCTGCCATCGTGAAGTATCCGAACCTGCGCCGGCAGTATGGACGCTGCCTCGCCCAG GGCACCGCTGTCGGGCGCGAGCTGTTCAGCGGGCTGTTCGACGAATTTCCAAATCTCAGGCTGGTGCATTCCATGCTGGG CGGCGGCTTCTTCGCCTTCGCAGACATGCTGGTGCCCCCCAGCACCGGCGGACGCGATGCCGTCGACCGGTTCGAGGATG AGAGCGCCAAGCTGCGCGGCTATCTCGCACGCAACATCTTCTTCGATCTCTCAGGGGCGCCGCAATGGGGACGGGCGCAG CTCGAATGCGCCGTCAAGGTGTTCGGCGCCGATCACATCCTCTACGGCGCGTCCTATCCGATCCGCCGCGACTGGTTTCA GGACGGCGTTCCACTCATTCGCAGCCTGTCATTGTCCGAGGCGGAGAAGGCTGCGATACTCGGCGGCAATACACGTCGGC TTTTCAAGCTCGTCTGA
Upstream 100 bases:
>100_bases CAAGAAAGATATAGGCTGAGTTATATGTCTTTCGAGAAAGATATCAAGTGCGGCGCACTGATGGCGCCGCGATGTTCTGT GTACCCAGGAGACCACCATC
Downstream 100 bases:
>100_bases GCGCGAGGTCGGACTGAGATCCTGGAGCAGCCGCTGACGCGTCAAGGCTGCTTTCCGGGCACCATCACGCCTTTCAGCCC GGCGCGCTCGGCGGCGGTGC
Product: putative metal-dependent hydrolase amidohydrolase
Products: NA
Alternate protein names: 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; Amidohydrolase Family Protein; 5-Carboxyvanillate Decarboxylase; Amidohydrolase; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Hydrolase; Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTRSRREVIQLAAAGAVAGVTTGAAQAQAPDGAVIDANMHWLPEDLFSDERLLTAFAGAVPREYGIHAKVMPVPGKPLRQ IVIEQPLGYEVLNYAENQYNAAGQIADMDQAGIAQAILRLPCWQEWLPLELCRRVNDGLAAHLKRHPGRFQALAVVPPWG TPDALKEVERCVHDLGFVGVQMAAHYGQLYLDDPAFKPHLKFLDQLGVPVVVHHTPLPVDYAAIVKYPNLRRQYGRCLAQ GTAVGRELFSGLFDEFPNLRLVHSMLGGGFFAFADMLVPPSTGGRDAVDRFEDESAKLRGYLARNIFFDLSGAPQWGRAQ LECAVKVFGADHILYGASYPIRRDWFQDGVPLIRSLSLSEAEKAAILGGNTRRLFKLV
Sequences:
>Translated_378_residues MTRSRREVIQLAAAGAVAGVTTGAAQAQAPDGAVIDANMHWLPEDLFSDERLLTAFAGAVPREYGIHAKVMPVPGKPLRQ IVIEQPLGYEVLNYAENQYNAAGQIADMDQAGIAQAILRLPCWQEWLPLELCRRVNDGLAAHLKRHPGRFQALAVVPPWG TPDALKEVERCVHDLGFVGVQMAAHYGQLYLDDPAFKPHLKFLDQLGVPVVVHHTPLPVDYAAIVKYPNLRRQYGRCLAQ GTAVGRELFSGLFDEFPNLRLVHSMLGGGFFAFADMLVPPSTGGRDAVDRFEDESAKLRGYLARNIFFDLSGAPQWGRAQ LECAVKVFGADHILYGASYPIRRDWFQDGVPLIRSLSLSEAEKAAILGGNTRRLFKLV >Mature_377_residues TRSRREVIQLAAAGAVAGVTTGAAQAQAPDGAVIDANMHWLPEDLFSDERLLTAFAGAVPREYGIHAKVMPVPGKPLRQI VIEQPLGYEVLNYAENQYNAAGQIADMDQAGIAQAILRLPCWQEWLPLELCRRVNDGLAAHLKRHPGRFQALAVVPPWGT PDALKEVERCVHDLGFVGVQMAAHYGQLYLDDPAFKPHLKFLDQLGVPVVVHHTPLPVDYAAIVKYPNLRRQYGRCLAQG TAVGRELFSGLFDEFPNLRLVHSMLGGGFFAFADMLVPPSTGGRDAVDRFEDESAKLRGYLARNIFFDLSGAPQWGRAQL ECAVKVFGADHILYGASYPIRRDWFQDGVPLIRSLSLSEAEKAAILGGNTRRLFKLV
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI109715856, Length=282, Percent_Identity=27.6595744680851, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41630; Mature: 41499
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSRREVIQLAAAGAVAGVTTGAAQAQAPDGAVIDANMHWLPEDLFSDERLLTAFAGAV CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHCCCHHHHHHHHHCC PREYGIHAKVMPVPGKPLRQIVIEQPLGYEVLNYAENQYNAAGQIADMDQAGIAQAILRL CHHHCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC PCWQEWLPLELCRRVNDGLAAHLKRHPGRFQALAVVPPWGTPDALKEVERCVHDLGFVGV CCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH QMAAHYGQLYLDDPAFKPHLKFLDQLGVPVVVHHTPLPVDYAAIVKYPNLRRQYGRCLAQ HHHHHCCEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHH GTAVGRELFSGLFDEFPNLRLVHSMLGGGFFAFADMLVPPSTGGRDAVDRFEDESAKLRG HHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHH YLARNIFFDLSGAPQWGRAQLECAVKVFGADHILYGASYPIRRDWFQDGVPLIRSLSLSE HHHHHHEEECCCCCCCCCHHHHHHHEEECCCEEEECCCCCHHHHHHHCCHHHHHHCCHHH AEKAAILGGNTRRLFKLV HHHHHEECCCHHHHHCCC >Mature Secondary Structure TRSRREVIQLAAAGAVAGVTTGAAQAQAPDGAVIDANMHWLPEDLFSDERLLTAFAGAV CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHCCCHHHHHHHHHCC PREYGIHAKVMPVPGKPLRQIVIEQPLGYEVLNYAENQYNAAGQIADMDQAGIAQAILRL CHHHCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC PCWQEWLPLELCRRVNDGLAAHLKRHPGRFQALAVVPPWGTPDALKEVERCVHDLGFVGV CCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH QMAAHYGQLYLDDPAFKPHLKFLDQLGVPVVVHHTPLPVDYAAIVKYPNLRRQYGRCLAQ HHHHHCCEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHH GTAVGRELFSGLFDEFPNLRLVHSMLGGGFFAFADMLVPPSTGGRDAVDRFEDESAKLRG HHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHH YLARNIFFDLSGAPQWGRAQLECAVKVFGADHILYGASYPIRRDWFQDGVPLIRSLSLSE HHHHHHEEECCCCCCCCCHHHHHHHEEECCCEEEECCCCCHHHHHHHCCHHHHHHCCHHH AEKAAILGGNTRRLFKLV HHHHHEECCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA