BacMap

Definition	Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession	NC_009445
Length	7,456,587

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The map label for this gene is ycbD [H]

Identifier: 146338634

GI number: 146338634

Start: 1673187

End: 1674674

Strand: Reverse

Name: ycbD [H]

Synonym: BRADO1563

Alternate gene names: 146338634

Gene position: 1674674-1673187 (Counterclockwise)

Preceding gene: 146338635

Following gene: 146338633

Centisome position: 22.46

GC content: 66.4

Gene sequence:

>1488_bases
TTGTGCCAGCACAGTCGCGCAAGCCTGGAGAGTTTTGAAATGAACGCGATCCTCAAGAATTTCATCGCCGGCGAGTGGGT
CGACGGCAGCGGAGTGACCCGCAACATCAACCCGTCCAACACCAATGATGTCGTCGGCGAATACGCCAAGGCGGACAAGG
CGCAGACCGAGAAGGCGATCGCCGCCGCCAAGGCCGCATTCCCCGCCTGGTCGCGCTCGACGCCGCAGGAGCGCTATGAC
GCGCTCAACAAGATCTCGGCGGAGATCCTGTCGCGCAAGGAAGAGCTCGGCCGCCTGCTCGCCCGCGAGGAAGGCAAGAC
GCTGCCGGAGGGCATCGGCGAGGTCGCCCGCGCCGGCCAGATTTTTGCGTTCTTCGCCGGCGAGGCGCTGCGCCTGACCG
GTGAGAAGGGCGCCTCGGTGCGTCCGGGCCTCGACGTCGAGATCACCCGCGAGGCGGTCGGCGTCGTCGGCATGATCACG
CCCTGGAATTTCCCGATCGCGATTCCCGCCTGGAAGATCGCTCCCGCGCTCTGCTACGGCAACACCGTGGTGTTCAAGCC
GGCTGAGCTTGTTCCGGGCTCGGCCCACGCCCTCTCCGAGATCATCGCGCGCTCCGGCATTCCGGCGGGCGTATTCAACC
TCGTCGTCGGCTCCGGCTCGGTGGTCGGCCAGACCCTGCTCGAACATCCGGACGTCGCCGCGATCTCCTTCACCGGCTCG
GTCGGCACGGGGCGCAAGATCGCGCAGGCCTGCGTGCTGTCGAACCCGATGAAGAAGTTCCAGCTCGAAATGGGCGGCAA
GAACCCGCTGGTCGTGCTCGATGACGCCGATGTCAAGGTCGCGGTCGAAGCCGCCGCCAACGGCGCCTACTTCTCGACCG
GCCAGCGCTGCACCGCGTCCTCCCGCCTGATCGTGACCGAGGGCATCCACGACAAGTTCGTCGCGGCGCTCACCGAGCGA
TTGAAGGGCCTCGTGGTCGATGACGCCGTCAAGCAGGGCACGCATATCGGCCCGGTGGTCGACGGCAACCAGCTCGAGCA
GGACCAGCGCTATCTCAAGATCGGCCAGGACGAAGGCGCCAAGCTGGCCTGGGGCGGCGAACTGCTCAACCGCGAGAGCC
CGGGCTTCTACATGCAGCCGGCGCTGTTCACGGAAGCCAACAACAACATGCGCATCGCGCGTGAGGAGATTTTTGGCCCG
GTGGCCTGCGTCATCCGCGCCAAGAACTACGACGAGGCGCTGGCGATCTCCAACGACACCGAGTTCGGCCTCGCCGCCGG
CGTCTGCACCACTAGCCTGAAATACGCCTCGCACTTCAAGCGCAACAGCGAGGCCGGCATGGTGATGGTCAACCTGCCGA
CCGCGGGCGTCGACTACCACGTCCCGTTCGGCGGCCGGAAGGGCTCGAGCTACGGCGCCCGCGAGCAGGGCTCCTACGCG
CGCGAGTTCTACACCACGGTGAAGACGGCCTACACCTTCCCGGTGTGA

Upstream 100 bases:

>100_bases
CGCACGAGACGACGCCGTCGCGATGCAGTATCTGATCCCCGGCTGGACCTTCGACGACAAGCGGCCCTGCCTCGTGCGGT
GACGGATGTAATCGGCTAGA

Downstream 100 bases:

>100_bases
GCCGGTCGTCATTGCGAGCGAAGCGAAGCAATCCAGGAGCCAATCGAAGATTCTGGATGGCTTCGTCGCTTCGCTCCTTG
CAATGACGGAAACGAAGACC

Product: aldehyde dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MCQHSRASLESFEMNAILKNFIAGEWVDGSGVTRNINPSNTNDVVGEYAKADKAQTEKAIAAAKAAFPAWSRSTPQERYD
ALNKISAEILSRKEELGRLLAREEGKTLPEGIGEVARAGQIFAFFAGEALRLTGEKGASVRPGLDVEITREAVGVVGMIT
PWNFPIAIPAWKIAPALCYGNTVVFKPAELVPGSAHALSEIIARSGIPAGVFNLVVGSGSVVGQTLLEHPDVAAISFTGS
VGTGRKIAQACVLSNPMKKFQLEMGGKNPLVVLDDADVKVAVEAAANGAYFSTGQRCTASSRLIVTEGIHDKFVAALTER
LKGLVVDDAVKQGTHIGPVVDGNQLEQDQRYLKIGQDEGAKLAWGGELLNRESPGFYMQPALFTEANNNMRIAREEIFGP
VACVIRAKNYDEALAISNDTEFGLAAGVCTTSLKYASHFKRNSEAGMVMVNLPTAGVDYHVPFGGRKGSSYGAREQGSYA
REFYTTVKTAYTFPV

Sequences:

>Translated_495_residues
MCQHSRASLESFEMNAILKNFIAGEWVDGSGVTRNINPSNTNDVVGEYAKADKAQTEKAIAAAKAAFPAWSRSTPQERYD
ALNKISAEILSRKEELGRLLAREEGKTLPEGIGEVARAGQIFAFFAGEALRLTGEKGASVRPGLDVEITREAVGVVGMIT
PWNFPIAIPAWKIAPALCYGNTVVFKPAELVPGSAHALSEIIARSGIPAGVFNLVVGSGSVVGQTLLEHPDVAAISFTGS
VGTGRKIAQACVLSNPMKKFQLEMGGKNPLVVLDDADVKVAVEAAANGAYFSTGQRCTASSRLIVTEGIHDKFVAALTER
LKGLVVDDAVKQGTHIGPVVDGNQLEQDQRYLKIGQDEGAKLAWGGELLNRESPGFYMQPALFTEANNNMRIAREEIFGP
VACVIRAKNYDEALAISNDTEFGLAAGVCTTSLKYASHFKRNSEAGMVMVNLPTAGVDYHVPFGGRKGSSYGAREQGSYA
REFYTTVKTAYTFPV
>Mature_495_residues
MCQHSRASLESFEMNAILKNFIAGEWVDGSGVTRNINPSNTNDVVGEYAKADKAQTEKAIAAAKAAFPAWSRSTPQERYD
ALNKISAEILSRKEELGRLLAREEGKTLPEGIGEVARAGQIFAFFAGEALRLTGEKGASVRPGLDVEITREAVGVVGMIT
PWNFPIAIPAWKIAPALCYGNTVVFKPAELVPGSAHALSEIIARSGIPAGVFNLVVGSGSVVGQTLLEHPDVAAISFTGS
VGTGRKIAQACVLSNPMKKFQLEMGGKNPLVVLDDADVKVAVEAAANGAYFSTGQRCTASSRLIVTEGIHDKFVAALTER
LKGLVVDDAVKQGTHIGPVVDGNQLEQDQRYLKIGQDEGAKLAWGGELLNRESPGFYMQPALFTEANNNMRIAREEIFGP
VACVIRAKNYDEALAISNDTEFGLAAGVCTTSLKYASHFKRNSEAGMVMVNLPTAGVDYHVPFGGRKGSSYGAREQGSYA
REFYTTVKTAYTFPV

Specific function: 4-aminobutyrate (GABA) degradation. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI25777730, Length=476, Percent_Identity=38.655462184874, Blast_Score=294, Evalue=1e-79,
Organism=Homo sapiens, GI153266822, Length=483, Percent_Identity=38.7163561076605, Blast_Score=294, Evalue=1e-79,
Organism=Homo sapiens, GI25777724, Length=477, Percent_Identity=38.1551362683438, Blast_Score=285, Evalue=6e-77,
Organism=Homo sapiens, GI12007648, Length=481, Percent_Identity=34.3035343035343, Blast_Score=285, Evalue=8e-77,
Organism=Homo sapiens, GI21614513, Length=479, Percent_Identity=37.3695198329854, Blast_Score=283, Evalue=2e-76,
Organism=Homo sapiens, GI115387104, Length=475, Percent_Identity=35.3684210526316, Blast_Score=282, Evalue=5e-76,
Organism=Homo sapiens, GI238814322, Length=493, Percent_Identity=34.2799188640974, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI25777732, Length=479, Percent_Identity=37.5782881002088, Blast_Score=274, Evalue=2e-73,
Organism=Homo sapiens, GI21361176, Length=476, Percent_Identity=36.1344537815126, Blast_Score=271, Evalue=1e-72,
Organism=Homo sapiens, GI25777728, Length=340, Percent_Identity=42.6470588235294, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI25952152, Length=481, Percent_Identity=32.016632016632, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI25777726, Length=477, Percent_Identity=35.2201257861635, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI11095441, Length=476, Percent_Identity=31.7226890756302, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI4507229, Length=474, Percent_Identity=32.7004219409283, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI25777721, Length=487, Percent_Identity=31.8275154004107, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI310128093, Length=467, Percent_Identity=29.3361884368308, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI188035924, Length=483, Percent_Identity=28.5714285714286, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI310128103, Length=472, Percent_Identity=29.0254237288136, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI310128091, Length=467, Percent_Identity=28.051391862955, Blast_Score=175, Evalue=9e-44,
Organism=Homo sapiens, GI301500698, Length=284, Percent_Identity=32.7464788732394, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI238859541, Length=472, Percent_Identity=27.1186440677966, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI25777736, Length=472, Percent_Identity=27.1186440677966, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI25777734, Length=472, Percent_Identity=27.1186440677966, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI310128089, Length=333, Percent_Identity=28.5285285285285, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI73695881, Length=353, Percent_Identity=27.7620396600567, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI73695879, Length=353, Percent_Identity=27.7620396600567, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI206597441, Length=352, Percent_Identity=27.2727272727273, Blast_Score=126, Evalue=6e-29,
Organism=Homo sapiens, GI206597439, Length=352, Percent_Identity=27.2727272727273, Blast_Score=126, Evalue=6e-29,
Organism=Homo sapiens, GI22907049, Length=352, Percent_Identity=27.2727272727273, Blast_Score=126, Evalue=6e-29,
Organism=Homo sapiens, GI310128097, Length=255, Percent_Identity=30.5882352941176, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI4502043, Length=320, Percent_Identity=26.875, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI238814371, Length=320, Percent_Identity=26.875, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI310128087, Length=286, Percent_Identity=29.020979020979, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI71773324, Length=320, Percent_Identity=26.875, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI310128095, Length=311, Percent_Identity=28.6173633440514, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI4557303, Length=327, Percent_Identity=26.2996941896024, Blast_Score=115, Evalue=9e-26,
Organism=Homo sapiens, GI73466520, Length=327, Percent_Identity=26.2996941896024, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI223972651, Length=479, Percent_Identity=26.9311064718163, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI310128099, Length=228, Percent_Identity=28.5087719298246, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI310128101, Length=228, Percent_Identity=28.5087719298246, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI223972653, Length=227, Percent_Identity=30.8370044052863, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1789015, Length=471, Percent_Identity=36.0934182590234, Blast_Score=286, Evalue=3e-78,
Organism=Escherichia coli, GI1786504, Length=459, Percent_Identity=35.2941176470588, Blast_Score=257, Evalue=1e-69,
Organism=Escherichia coli, GI1787684, Length=434, Percent_Identity=35.7142857142857, Blast_Score=254, Evalue=6e-69,
Organism=Escherichia coli, GI87081896, Length=452, Percent_Identity=34.2920353982301, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI1787558, Length=501, Percent_Identity=32.7345309381238, Blast_Score=248, Evalue=8e-67,
Organism=Escherichia coli, GI1787715, Length=472, Percent_Identity=35.1694915254237, Blast_Score=247, Evalue=2e-66,
Organism=Escherichia coli, GI87082295, Length=494, Percent_Identity=35.6275303643725, Blast_Score=231, Evalue=1e-61,
Organism=Escherichia coli, GI1788042, Length=468, Percent_Identity=32.9059829059829, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI87081926, Length=462, Percent_Identity=30.7359307359307, Blast_Score=198, Evalue=8e-52,
Organism=Escherichia coli, GI1787250, Length=490, Percent_Identity=28.9795918367347, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1787653, Length=446, Percent_Identity=24.4394618834081, Blast_Score=102, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17562198, Length=496, Percent_Identity=36.491935483871, Blast_Score=276, Evalue=2e-74,
Organism=Caenorhabditis elegans, GI133930964, Length=492, Percent_Identity=35.9756097560976, Blast_Score=275, Evalue=5e-74,
Organism=Caenorhabditis elegans, GI25144435, Length=477, Percent_Identity=37.5262054507338, Blast_Score=270, Evalue=2e-72,
Organism=Caenorhabditis elegans, GI25143876, Length=487, Percent_Identity=32.6488706365503, Blast_Score=253, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI25143874, Length=443, Percent_Identity=34.3115124153499, Blast_Score=253, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI32564736, Length=340, Percent_Identity=42.3529411764706, Blast_Score=252, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI17551164, Length=484, Percent_Identity=33.0578512396694, Blast_Score=231, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI17534119, Length=473, Percent_Identity=35.0951374207188, Blast_Score=228, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI71995606, Length=462, Percent_Identity=33.3333333333333, Blast_Score=228, Evalue=8e-60,
Organism=Caenorhabditis elegans, GI71986308, Length=480, Percent_Identity=31.0416666666667, Blast_Score=224, Evalue=8e-59,
Organism=Caenorhabditis elegans, GI115534176, Length=489, Percent_Identity=30.879345603272, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI71995613, Length=399, Percent_Identity=34.0852130325814, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17534447, Length=475, Percent_Identity=27.1578947368421, Blast_Score=135, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI32564151, Length=417, Percent_Identity=28.0575539568345, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17564084, Length=348, Percent_Identity=28.448275862069, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI25146391, Length=345, Percent_Identity=29.8550724637681, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI25146394, Length=345, Percent_Identity=29.8550724637681, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI32566756, Length=345, Percent_Identity=29.8550724637681, Blast_Score=122, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI115532534, Length=376, Percent_Identity=26.5957446808511, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI71990744, Length=311, Percent_Identity=27.9742765273312, Blast_Score=93, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6320917, Length=474, Percent_Identity=36.7088607594937, Blast_Score=283, Evalue=5e-77,
Organism=Saccharomyces cerevisiae, GI6324950, Length=457, Percent_Identity=37.417943107221, Blast_Score=281, Evalue=2e-76,
Organism=Saccharomyces cerevisiae, GI6325196, Length=462, Percent_Identity=36.3636363636364, Blast_Score=272, Evalue=7e-74,
Organism=Saccharomyces cerevisiae, GI6323822, Length=485, Percent_Identity=34.639175257732, Blast_Score=260, Evalue=3e-70,
Organism=Saccharomyces cerevisiae, GI6319478, Length=473, Percent_Identity=33.615221987315, Blast_Score=260, Evalue=4e-70,
Organism=Saccharomyces cerevisiae, GI6323821, Length=491, Percent_Identity=35.030549898167, Blast_Score=256, Evalue=6e-69,
Organism=Saccharomyces cerevisiae, GI6321828, Length=491, Percent_Identity=25.6619144602851, Blast_Score=152, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6321826, Length=459, Percent_Identity=25.4901960784314, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6323757, Length=271, Percent_Identity=25.4612546125461, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24650465, Length=477, Percent_Identity=38.1551362683438, Blast_Score=296, Evalue=2e-80,
Organism=Drosophila melanogaster, GI20129399, Length=476, Percent_Identity=38.0252100840336, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24585660, Length=477, Percent_Identity=33.7526205450734, Blast_Score=265, Evalue=7e-71,
Organism=Drosophila melanogaster, GI281362580, Length=476, Percent_Identity=32.7731092436975, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI62472918, Length=476, Percent_Identity=32.7731092436975, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI62472926, Length=476, Percent_Identity=32.7731092436975, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI62472936, Length=476, Percent_Identity=32.7731092436975, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI21356737, Length=476, Percent_Identity=32.7731092436975, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24666674, Length=470, Percent_Identity=31.2765957446809, Blast_Score=215, Evalue=6e-56,
Organism=Drosophila melanogaster, GI24638876, Length=468, Percent_Identity=30.982905982906, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24638878, Length=468, Percent_Identity=30.982905982906, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI45552499, Length=348, Percent_Identity=27.2988505747126, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI281360303, Length=348, Percent_Identity=27.2988505747126, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24668425, Length=483, Percent_Identity=25.6728778467909, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24668417, Length=483, Percent_Identity=25.6728778467909, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24668413, Length=483, Percent_Identity=25.6728778467909, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI281360299, Length=348, Percent_Identity=26.4367816091954, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI281360297, Length=348, Percent_Identity=26.4367816091954, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI281360295, Length=348, Percent_Identity=26.4367816091954, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24586250, Length=348, Percent_Identity=26.4367816091954, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI281360301, Length=348, Percent_Identity=26.4367816091954, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI28571806, Length=383, Percent_Identity=24.0208877284595, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28571798, Length=383, Percent_Identity=24.0208877284595, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28571796, Length=383, Percent_Identity=24.0208877284595, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28571794, Length=383, Percent_Identity=24.0208877284595, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28571802, Length=383, Percent_Identity=24.0208877284595, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28571800, Length=383, Percent_Identity=24.0208877284595, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281360293, Length=165, Percent_Identity=28.4848484848485, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28574525, Length=477, Percent_Identity=22.0125786163522, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.3 [H]

Molecular weight: Translated: 52941; Mature: 52941

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQHSRASLESFEMNAILKNFIAGEWVDGSGVTRNINPSNTNDVVGEYAKADKAQTEKAI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHH
AAAKAAFPAWSRSTPQERYDALNKISAEILSRKEELGRLLAREEGKTLPEGIGEVARAGQ
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
IFAFFAGEALRLTGEKGASVRPGLDVEITREAVGVVGMITPWNFPIAIPAWKIAPALCYG
EEEEECCCEEEEECCCCCCCCCCCCEEEEHHHCCEEEEECCCCCCEECCCHHHHHHHEEC
NTVVFKPAELVPGSAHALSEIIARSGIPAGVFNLVVGSGSVVGQTLLEHPDVAAISFTGS
CEEEECCHHHCCCCHHHHHHHHHHCCCCHHHHHHEECCCHHHHHHHHCCCCEEEEEECCC
VGTGRKIAQACVLSNPMKKFQLEMGGKNPLVVLDDADVKVAVEAAANGAYFSTGQRCTAS
CCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCEECCCCCCCCC
SRLIVTEGIHDKFVAALTERLKGLVVDDAVKQGTHIGPVVDGNQLEQDQRYLKIGQDEGA
CCEEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
KLAWGGELLNRESPGFYMQPALFTEANNNMRIAREEIFGPVACVIRAKNYDEALAISNDT
EEEECHHHHCCCCCCCEECCEEEEECCCCCEEEHHHHCCCEEEEEEECCCCCEEEECCCC
EFGLAAGVCTTSLKYASHFKRNSEAGMVMVNLPTAGVDYHVPFGGRKGSSYGAREQGSYA
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCHHH
REFYTTVKTAYTFPV
HHHHHHHHHEEECCC
>Mature Secondary Structure
MCQHSRASLESFEMNAILKNFIAGEWVDGSGVTRNINPSNTNDVVGEYAKADKAQTEKAI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHH
AAAKAAFPAWSRSTPQERYDALNKISAEILSRKEELGRLLAREEGKTLPEGIGEVARAGQ
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
IFAFFAGEALRLTGEKGASVRPGLDVEITREAVGVVGMITPWNFPIAIPAWKIAPALCYG
EEEEECCCEEEEECCCCCCCCCCCCEEEEHHHCCEEEEECCCCCCEECCCHHHHHHHEEC
NTVVFKPAELVPGSAHALSEIIARSGIPAGVFNLVVGSGSVVGQTLLEHPDVAAISFTGS
CEEEECCHHHCCCCHHHHHHHHHHCCCCHHHHHHEECCCHHHHHHHHCCCCEEEEEECCC
VGTGRKIAQACVLSNPMKKFQLEMGGKNPLVVLDDADVKVAVEAAANGAYFSTGQRCTAS
CCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCEECCCCCCCCC
SRLIVTEGIHDKFVAALTERLKGLVVDDAVKQGTHIGPVVDGNQLEQDQRYLKIGQDEGA
CCEEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
KLAWGGELLNRESPGFYMQPALFTEANNNMRIAREEIFGPVACVIRAKNYDEALAISNDT
EEEECHHHHCCCCCCCEECCEEEEECCCCCEEEHHHHCCCEEEEEEECCCCCEEEECCCC
EFGLAAGVCTTSLKYASHFKRNSEAGMVMVNLPTAGVDYHVPFGGRKGSSYGAREQGSYA
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCHHH
REFYTTVKTAYTFPV
HHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]