| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338541
Identifier: 146338541
GI number: 146338541
Start: 1565152
End: 1566357
Strand: Reverse
Name: 146338541
Synonym: BRADO1461
Alternate gene names: NA
Gene position: 1566357-1565152 (Counterclockwise)
Preceding gene: 146338542
Following gene: 146338540
Centisome position: 21.01
GC content: 65.34
Gene sequence:
>1206_bases ATGCGCACGAATCGTCAGACCGGCTCGAAGTGGCGGGCCAGCGGCGGATTGTCAGCATGCGCGACGATGCTGGCCGCGCT GGCCGCGTCCACCCTGCTGATCTCGACGGCCGGATGGGCCGGTGACGCGGACCCACTGCGCCTGTGCGCCGATCCGACCA ATCTCCCGTTCTCCAGCGACATTCCTTCGCAGCCGGGATTCTATCTCGAGATCGGGCAAGCCCTGTCGCAACAGATCGGC CGCCCCGTGACCTACGACTGGTACAAGTCCTATTTCGGCAAGCGGACGGTGCGCGTGACGCTGCTGGGCCGGCAATGCGA TGCGATGATCGGGCTGCCATTGTCCTCCGACTTCATGGGACCCGCCGTGATCTTCTCGAAAAAGATCACGACCGAAGCCT ACGCGCTGGTCAGCCTGAAAACGCTGACCTTGAGCGGCATCGACGACCTCCGCGGCAAGCGTGTCGCCGTCCAATATCAG ACGACGCCGCAAAACCTGCTGGCTGAGCGCGACGATATCGCGAAGGTGACGGTGCTGACGCCTGACGAGGGCATGGCGGC TCTCGCGCAGGGCAAGGCCGACGTCGCATTCGTGTGGGGTCCGGTCGCAGGCTGGCTCAACAAGACGGCCTATGACGGTC GCTTCCAGGTTCAGCCCGTGGAAGGCGCGGGCCTGTCCTGGGATGCCGCGATCGGCTTCGCTCGAACCTCCACCGAGCTG CGCGACCAGATCGACGCCGCCCTGCCGAAACTCGAGGGCCGGATCGCCGAGCTTGCCGCCAAATATGGGCTTCCGAGCGA GCCGCCCATCAAGCTCGGCGCCGCATCTGCTCCGATCCGGCTCGCTGCGCTCGGCAATCCCATCCCAATCGTGCGGCAAT CCACCGCCGCGGCGACGGTGACGACGGTTGCGGAAACCGGCGCGAGCGATCCCAAGGCGGAAGTCGTGGTGCTCGGCAAG GAGATCTTCAACGGCACCTGCGCGCATTGTCACGGTCCGGACGCGGTGCAGGCCGAGCGTCGCATCGACCTGCGGCGGCT GCAGACGCGCTATGGCGAGGACATGCGCGACAAGTTCTGGACCACGGTGCATGAGGGCCGTCCCTCCAAGGGCATGCCGG CCTGGAAGGAGGTCTTTACCGACGACCAGTTCGAGAGCATCTATGCGTTCCTGCTGACCGTGCAGTCCTCAGAAACGGCG AATTGA
Upstream 100 bases:
>100_bases TCGCGGTCCAATAACCGCTGAGACGTCCGCAACAAAGGCCCGGCACGGTCGCAAAGACCGTGCCGGTCGACCAAACAAAT AACAATCTGGAGGGATCGAG
Downstream 100 bases:
>100_bases GGAGCGCAGGCGGACCGCACGATCTGGCGGGACGGCCGGAGCGCGCGGGTGACAATCGAGAGCCGGACATGACGTGCTTC CTGATCATCGACGATCATCC
Product: Mox/cytochrome c like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MRTNRQTGSKWRASGGLSACATMLAALAASTLLISTAGWAGDADPLRLCADPTNLPFSSDIPSQPGFYLEIGQALSQQIG RPVTYDWYKSYFGKRTVRVTLLGRQCDAMIGLPLSSDFMGPAVIFSKKITTEAYALVSLKTLTLSGIDDLRGKRVAVQYQ TTPQNLLAERDDIAKVTVLTPDEGMAALAQGKADVAFVWGPVAGWLNKTAYDGRFQVQPVEGAGLSWDAAIGFARTSTEL RDQIDAALPKLEGRIAELAAKYGLPSEPPIKLGAASAPIRLAALGNPIPIVRQSTAAATVTTVAETGASDPKAEVVVLGK EIFNGTCAHCHGPDAVQAERRIDLRRLQTRYGEDMRDKFWTTVHEGRPSKGMPAWKEVFTDDQFESIYAFLLTVQSSETA N
Sequences:
>Translated_401_residues MRTNRQTGSKWRASGGLSACATMLAALAASTLLISTAGWAGDADPLRLCADPTNLPFSSDIPSQPGFYLEIGQALSQQIG RPVTYDWYKSYFGKRTVRVTLLGRQCDAMIGLPLSSDFMGPAVIFSKKITTEAYALVSLKTLTLSGIDDLRGKRVAVQYQ TTPQNLLAERDDIAKVTVLTPDEGMAALAQGKADVAFVWGPVAGWLNKTAYDGRFQVQPVEGAGLSWDAAIGFARTSTEL RDQIDAALPKLEGRIAELAAKYGLPSEPPIKLGAASAPIRLAALGNPIPIVRQSTAAATVTTVAETGASDPKAEVVVLGK EIFNGTCAHCHGPDAVQAERRIDLRRLQTRYGEDMRDKFWTTVHEGRPSKGMPAWKEVFTDDQFESIYAFLLTVQSSETA N >Mature_401_residues MRTNRQTGSKWRASGGLSACATMLAALAASTLLISTAGWAGDADPLRLCADPTNLPFSSDIPSQPGFYLEIGQALSQQIG RPVTYDWYKSYFGKRTVRVTLLGRQCDAMIGLPLSSDFMGPAVIFSKKITTEAYALVSLKTLTLSGIDDLRGKRVAVQYQ TTPQNLLAERDDIAKVTVLTPDEGMAALAQGKADVAFVWGPVAGWLNKTAYDGRFQVQPVEGAGLSWDAAIGFARTSTEL RDQIDAALPKLEGRIAELAAKYGLPSEPPIKLGAASAPIRLAALGNPIPIVRQSTAAATVTTVAETGASDPKAEVVVLGK EIFNGTCAHCHGPDAVQAERRIDLRRLQTRYGEDMRDKFWTTVHEGRPSKGMPAWKEVFTDDQFESIYAFLLTVQSSETA N
Specific function: Unknown
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43200; Mature: 43200
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTNRQTGSKWRASGGLSACATMLAALAASTLLISTAGWAGDADPLRLCADPTNLPFSSD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCCCCCC IPSQPGFYLEIGQALSQQIGRPVTYDWYKSYFGKRTVRVTLLGRQCDAMIGLPLSSDFMG CCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCCC PAVIFSKKITTEAYALVSLKTLTLSGIDDLRGKRVAVQYQTTPQNLLAERDDIAKVTVLT CHHEEEHHHCHHHEEEEEEEEEEECCCHHCCCCEEEEEEECCHHHHHHCCCCCEEEEEEC PDEGMAALAQGKADVAFVWGPVAGWLNKTAYDGRFQVQPVEGAGLSWDAAIGFARTSTEL CCCCHHHHHCCCCCEEEEECCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHCCHHCCHHH RDQIDAALPKLEGRIAELAAKYGLPSEPPIKLGAASAPIRLAALGNPIPIVRQSTAAATV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEECCCCCCEEECCCHHHHH TTVAETGASDPKAEVVVLGKEIFNGTCAHCHGPDAVQAERRIDLRRLQTRYGEDMRDKFW HHHHHCCCCCCCCEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH TTVHEGRPSKGMPAWKEVFTDDQFESIYAFLLTVQSSETAN HHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHEEEECCCCCC >Mature Secondary Structure MRTNRQTGSKWRASGGLSACATMLAALAASTLLISTAGWAGDADPLRLCADPTNLPFSSD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCCCCCCC IPSQPGFYLEIGQALSQQIGRPVTYDWYKSYFGKRTVRVTLLGRQCDAMIGLPLSSDFMG CCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCCC PAVIFSKKITTEAYALVSLKTLTLSGIDDLRGKRVAVQYQTTPQNLLAERDDIAKVTVLT CHHEEEHHHCHHHEEEEEEEEEEECCCHHCCCCEEEEEEECCHHHHHHCCCCCEEEEEEC PDEGMAALAQGKADVAFVWGPVAGWLNKTAYDGRFQVQPVEGAGLSWDAAIGFARTSTEL CCCCHHHHHCCCCCEEEEECCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHCCHHCCHHH RDQIDAALPKLEGRIAELAAKYGLPSEPPIKLGAASAPIRLAALGNPIPIVRQSTAAATV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCEEEEECCCCCCEEECCCHHHHH TTVAETGASDPKAEVVVLGKEIFNGTCAHCHGPDAVQAERRIDLRRLQTRYGEDMRDKFW HHHHHCCCCCCCCEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH TTVHEGRPSKGMPAWKEVFTDDQFESIYAFLLTVQSSETAN HHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA