| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is qheDH [H]
Identifier: 146338542
GI number: 146338542
Start: 1566444
End: 1568135
Strand: Reverse
Name: qheDH [H]
Synonym: BRADO1462
Alternate gene names: 146338542
Gene position: 1568135-1566444 (Counterclockwise)
Preceding gene: 146338544
Following gene: 146338541
Centisome position: 21.03
GC content: 64.13
Gene sequence:
>1692_bases TTGGCGGGCATCTCGACGGTTGCCTTCCTGGTTGCCGGCACGCTTGGCGTCCGCGCCAACGATTCGGCGATGAAGGCGGC CGCCGAGCCAGGGGCCTGGGCGATGGCGGGGCATGATTACGGCAACACCCGGTTCAGCCCCCTCAAGGAGATCAACACCG AGAACGCCGGCAAGCTGTCGCTGGTCTATTCATTCTCGCTGGCCTCGCTGCGCTCGAACGAGGCCTCGCCGATCGTGATA GGCAACACGCTCTACGTCTCGACCTCATGGGGACCGAAATACGTCTATGCGCTCGACGCCGCGACCGGCGCACGCAAATG GACCTACGAGCCGGAGATCCCGGACGATACGCTGCAATATGCCTGCTGCGACGTGAACAGCCGCGGCATCACCTACGCCG ACGGCAAGCTGTTCGTCGGTCGACTCGACGGCAAGCTGACCGCGCTCGATGCCGCCACCGGGAAGGAGTTGTGGACCGCG AAAGTGGTCGACTACAAGCAGGGCTCGGTGATCACCTCGCCGCCCCTGGTGGTCCGCGACAAGGTCATCACCGGCTTCGG AGGCGGCGAGTATGGCGTACGCGGCTCGCTGCAGGCCTACGACATCAATTCCGGCAAGATGGTGTGGCAGACCTACACGG TGCCCGCGCCCGGCGAGCCCGGCAGCGAGACCTGGAAGGGCGACACCGGCCTGCATGGCGGCGGCGCCGCTTGGCTGGTC GGCTCCTACGATCCGAAGAGCGACACGGTCTATTGGGGCACCAGCAATCCCGGTCCCTGGAACACCGCCGTGCGCTCGAC CGGCAATGGCGATTTCGGCAAGCTGACGAACCTCTACACCGCATCGACACTGGCGCTCGATCCGAACACCGGCAAGATCA AGTGGCATATCCAGACCACCCCCGCCGATGCCTGGGACTATGATGGCGTCAACGAGGCCGTGCTCGCCGACCTCAATGTC GGCGGAGCGGCCGTGCCGACCCTGATGAAGGCCGACCGCAACGGCTTTTTCTTCGTGGCCAACCGCGAGACGGGCAAGGT GATCTCGGCGGAAAAATATGTCTTCGCCAACTGGGCGCAGAAGTGGGACACTTCGACCTTGCGCGCGGTCGAGGACCCGG ACAAGCGGCCGGGCCCGGGACATCCTGTCAAGGACGTCTGTCCGAACCTGATCGGCGGCAAGAATTGGCAGCCAATGTCG TACAGCCCGGACACCGGCTTGGTCTACATCCCCGCCAACAATGTCTGCATGGACTGGTCCGTCGGCGACGTCTCCTACAA GCGCGGCGTGTTCTATCTCGGTGCGGAATTCCCGACCAAGGAAGGACCGGGAGGGTTCCTCGGCGAGCTCATCGCCTGGG ATCCCGTGAACAATAAGAAGGTGTGGTCGATCCAGGAGGATCTTCCCTTCAATGGCGGCACGCTCAGCACCGCCGGCGGC CTTGTGTTCTCCGGCAATCTGCACGGTGATTTCCGCGCCATCGACGCCAAGAGCGGCAAGATCCTGTGGAAGAAGAATCT CGGTTCGGGCATTGGCGCCGGTCCGGTGACCTACTCGGTCGACGGCAAGCAATACGTCGCCGTCGTCGTCGGGCGCACCG CCTCGATCCCGGCCTTCCTCGGCGAGATCGGCAAGAAGATGACGAACGCTGCCCCCGAAGGCGGCGCCCTGTTCGTATTC GCGGTCCAATAA
Upstream 100 bases:
>100_bases AGCGCGACTGCACATCCCGGGGGGGTGGCGCGCACACGTCACACAACCACAACAAAGACACATGCGGAGGGAACTGATGA ATTTCACGAGCAGGAGATTC
Downstream 100 bases:
>100_bases CCGCTGAGACGTCCGCAACAAAGGCCCGGCACGGTCGCAAAGACCGTGCCGGTCGACCAAACAAATAACAATCTGGAGGG ATCGAGATGCGCACGAATCG
Product: quinoprotein ethanol dehydrogenase
Products: NA
Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MAGISTVAFLVAGTLGVRANDSAMKAAAEPGAWAMAGHDYGNTRFSPLKEINTENAGKLSLVYSFSLASLRSNEASPIVI GNTLYVSTSWGPKYVYALDAATGARKWTYEPEIPDDTLQYACCDVNSRGITYADGKLFVGRLDGKLTALDAATGKELWTA KVVDYKQGSVITSPPLVVRDKVITGFGGGEYGVRGSLQAYDINSGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLV GSYDPKSDTVYWGTSNPGPWNTAVRSTGNGDFGKLTNLYTASTLALDPNTGKIKWHIQTTPADAWDYDGVNEAVLADLNV GGAAVPTLMKADRNGFFFVANRETGKVISAEKYVFANWAQKWDTSTLRAVEDPDKRPGPGHPVKDVCPNLIGGKNWQPMS YSPDTGLVYIPANNVCMDWSVGDVSYKRGVFYLGAEFPTKEGPGGFLGELIAWDPVNNKKVWSIQEDLPFNGGTLSTAGG LVFSGNLHGDFRAIDAKSGKILWKKNLGSGIGAGPVTYSVDGKQYVAVVVGRTASIPAFLGEIGKKMTNAAPEGGALFVF AVQ
Sequences:
>Translated_563_residues MAGISTVAFLVAGTLGVRANDSAMKAAAEPGAWAMAGHDYGNTRFSPLKEINTENAGKLSLVYSFSLASLRSNEASPIVI GNTLYVSTSWGPKYVYALDAATGARKWTYEPEIPDDTLQYACCDVNSRGITYADGKLFVGRLDGKLTALDAATGKELWTA KVVDYKQGSVITSPPLVVRDKVITGFGGGEYGVRGSLQAYDINSGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLV GSYDPKSDTVYWGTSNPGPWNTAVRSTGNGDFGKLTNLYTASTLALDPNTGKIKWHIQTTPADAWDYDGVNEAVLADLNV GGAAVPTLMKADRNGFFFVANRETGKVISAEKYVFANWAQKWDTSTLRAVEDPDKRPGPGHPVKDVCPNLIGGKNWQPMS YSPDTGLVYIPANNVCMDWSVGDVSYKRGVFYLGAEFPTKEGPGGFLGELIAWDPVNNKKVWSIQEDLPFNGGTLSTAGG LVFSGNLHGDFRAIDAKSGKILWKKNLGSGIGAGPVTYSVDGKQYVAVVVGRTASIPAFLGEIGKKMTNAAPEGGALFVF AVQ >Mature_562_residues AGISTVAFLVAGTLGVRANDSAMKAAAEPGAWAMAGHDYGNTRFSPLKEINTENAGKLSLVYSFSLASLRSNEASPIVIG NTLYVSTSWGPKYVYALDAATGARKWTYEPEIPDDTLQYACCDVNSRGITYADGKLFVGRLDGKLTALDAATGKELWTAK VVDYKQGSVITSPPLVVRDKVITGFGGGEYGVRGSLQAYDINSGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLVG SYDPKSDTVYWGTSNPGPWNTAVRSTGNGDFGKLTNLYTASTLALDPNTGKIKWHIQTTPADAWDYDGVNEAVLADLNVG GAAVPTLMKADRNGFFFVANRETGKVISAEKYVFANWAQKWDTSTLRAVEDPDKRPGPGHPVKDVCPNLIGGKNWQPMSY SPDTGLVYIPANNVCMDWSVGDVSYKRGVFYLGAEFPTKEGPGGFLGELIAWDPVNNKKVWSIQEDLPFNGGTLSTAGGL VFSGNLHGDFRAIDAKSGKILWKKNLGSGIGAGPVTYSVDGKQYVAVVVGRTASIPAFLGEIGKKMTNAAPEGGALFVFA VQ
Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=562, Percent_Identity=25.6227758007117, Blast_Score=145, Evalue=8e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.98.1 [H]
Molecular weight: Translated: 59888; Mature: 59757
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGISTVAFLVAGTLGVRANDSAMKAAAEPGAWAMAGHDYGNTRFSPLKEINTENAGKLS CCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCEEE LVYSFSLASLRSNEASPIVIGNTLYVSTSWGPKYVYALDAATGARKWTYEPEIPDDTLQY EEEEEEEHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCHHHEE ACCDVNSRGITYADGKLFVGRLDGKLTALDAATGKELWTAKVVDYKQGSVITSPPLVVRD EEECCCCCCEEEECCEEEEEEECCEEEEEECCCCCCEEEEEEEEECCCCEEECCCEEEEE KVITGFGGGEYGVRGSLQAYDINSGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLV EEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE GSYDPKSDTVYWGTSNPGPWNTAVRSTGNGDFGKLTNLYTASTLALDPNTGKIKWHIQTT ECCCCCCCEEEEECCCCCCCCHHEECCCCCCCHHHHEEEEEEEEEECCCCCEEEEEEEEC PADAWDYDGVNEAVLADLNVGGAAVPTLMKADRNGFFFVANRETGKVISAEKYVFANWAQ CCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEEECCCCCEEECCEEEEEHHHH KWDTSTLRAVEDPDKRPGPGHPVKDVCPNLIGGKNWQPMSYSPDTGLVYIPANNVCMDWS HCCCCCEEECCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEE VGDVSYKRGVFYLGAEFPTKEGPGGFLGELIAWDPVNNKKVWSIQEDLPFNGGTLSTAGG CCCCCCCCCEEEEECCCCCCCCCCCHHHHEEEECCCCCCEEEEEHHCCCCCCCEEECCCC LVFSGNLHGDFRAIDAKSGKILWKKNLGSGIGAGPVTYSVDGKQYVAVVVGRTASIPAFL EEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHH GEIGKKMTNAAPEGGALFVFAVQ HHHHHHHHCCCCCCCEEEEEEEC >Mature Secondary Structure AGISTVAFLVAGTLGVRANDSAMKAAAEPGAWAMAGHDYGNTRFSPLKEINTENAGKLS CCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCEEE LVYSFSLASLRSNEASPIVIGNTLYVSTSWGPKYVYALDAATGARKWTYEPEIPDDTLQY EEEEEEEHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCHHHEE ACCDVNSRGITYADGKLFVGRLDGKLTALDAATGKELWTAKVVDYKQGSVITSPPLVVRD EEECCCCCCEEEECCEEEEEEECCEEEEEECCCCCCEEEEEEEEECCCCEEECCCEEEEE KVITGFGGGEYGVRGSLQAYDINSGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLV EEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE GSYDPKSDTVYWGTSNPGPWNTAVRSTGNGDFGKLTNLYTASTLALDPNTGKIKWHIQTT ECCCCCCCEEEEECCCCCCCCHHEECCCCCCCHHHHEEEEEEEEEECCCCCEEEEEEEEC PADAWDYDGVNEAVLADLNVGGAAVPTLMKADRNGFFFVANRETGKVISAEKYVFANWAQ CCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEEECCCCCEEECCEEEEEHHHH KWDTSTLRAVEDPDKRPGPGHPVKDVCPNLIGGKNWQPMSYSPDTGLVYIPANNVCMDWS HCCCCCEEECCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEE VGDVSYKRGVFYLGAEFPTKEGPGGFLGELIAWDPVNNKKVWSIQEDLPFNGGTLSTAGG CCCCCCCCCEEEEECCCCCCCCCCCHHHHEEEECCCCCCEEEEEHHCCCCCCCEEECCCC LVFSGNLHGDFRAIDAKSGKILWKKNLGSGIGAGPVTYSVDGKQYVAVVVGRTASIPAFL EEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHH GEIGKKMTNAAPEGGALFVFAVQ HHHHHHHHCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]