Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is qheDH [H]

Identifier: 146338542

GI number: 146338542

Start: 1566444

End: 1568135

Strand: Reverse

Name: qheDH [H]

Synonym: BRADO1462

Alternate gene names: 146338542

Gene position: 1568135-1566444 (Counterclockwise)

Preceding gene: 146338544

Following gene: 146338541

Centisome position: 21.03

GC content: 64.13

Gene sequence:

>1692_bases
TTGGCGGGCATCTCGACGGTTGCCTTCCTGGTTGCCGGCACGCTTGGCGTCCGCGCCAACGATTCGGCGATGAAGGCGGC
CGCCGAGCCAGGGGCCTGGGCGATGGCGGGGCATGATTACGGCAACACCCGGTTCAGCCCCCTCAAGGAGATCAACACCG
AGAACGCCGGCAAGCTGTCGCTGGTCTATTCATTCTCGCTGGCCTCGCTGCGCTCGAACGAGGCCTCGCCGATCGTGATA
GGCAACACGCTCTACGTCTCGACCTCATGGGGACCGAAATACGTCTATGCGCTCGACGCCGCGACCGGCGCACGCAAATG
GACCTACGAGCCGGAGATCCCGGACGATACGCTGCAATATGCCTGCTGCGACGTGAACAGCCGCGGCATCACCTACGCCG
ACGGCAAGCTGTTCGTCGGTCGACTCGACGGCAAGCTGACCGCGCTCGATGCCGCCACCGGGAAGGAGTTGTGGACCGCG
AAAGTGGTCGACTACAAGCAGGGCTCGGTGATCACCTCGCCGCCCCTGGTGGTCCGCGACAAGGTCATCACCGGCTTCGG
AGGCGGCGAGTATGGCGTACGCGGCTCGCTGCAGGCCTACGACATCAATTCCGGCAAGATGGTGTGGCAGACCTACACGG
TGCCCGCGCCCGGCGAGCCCGGCAGCGAGACCTGGAAGGGCGACACCGGCCTGCATGGCGGCGGCGCCGCTTGGCTGGTC
GGCTCCTACGATCCGAAGAGCGACACGGTCTATTGGGGCACCAGCAATCCCGGTCCCTGGAACACCGCCGTGCGCTCGAC
CGGCAATGGCGATTTCGGCAAGCTGACGAACCTCTACACCGCATCGACACTGGCGCTCGATCCGAACACCGGCAAGATCA
AGTGGCATATCCAGACCACCCCCGCCGATGCCTGGGACTATGATGGCGTCAACGAGGCCGTGCTCGCCGACCTCAATGTC
GGCGGAGCGGCCGTGCCGACCCTGATGAAGGCCGACCGCAACGGCTTTTTCTTCGTGGCCAACCGCGAGACGGGCAAGGT
GATCTCGGCGGAAAAATATGTCTTCGCCAACTGGGCGCAGAAGTGGGACACTTCGACCTTGCGCGCGGTCGAGGACCCGG
ACAAGCGGCCGGGCCCGGGACATCCTGTCAAGGACGTCTGTCCGAACCTGATCGGCGGCAAGAATTGGCAGCCAATGTCG
TACAGCCCGGACACCGGCTTGGTCTACATCCCCGCCAACAATGTCTGCATGGACTGGTCCGTCGGCGACGTCTCCTACAA
GCGCGGCGTGTTCTATCTCGGTGCGGAATTCCCGACCAAGGAAGGACCGGGAGGGTTCCTCGGCGAGCTCATCGCCTGGG
ATCCCGTGAACAATAAGAAGGTGTGGTCGATCCAGGAGGATCTTCCCTTCAATGGCGGCACGCTCAGCACCGCCGGCGGC
CTTGTGTTCTCCGGCAATCTGCACGGTGATTTCCGCGCCATCGACGCCAAGAGCGGCAAGATCCTGTGGAAGAAGAATCT
CGGTTCGGGCATTGGCGCCGGTCCGGTGACCTACTCGGTCGACGGCAAGCAATACGTCGCCGTCGTCGTCGGGCGCACCG
CCTCGATCCCGGCCTTCCTCGGCGAGATCGGCAAGAAGATGACGAACGCTGCCCCCGAAGGCGGCGCCCTGTTCGTATTC
GCGGTCCAATAA

Upstream 100 bases:

>100_bases
AGCGCGACTGCACATCCCGGGGGGGTGGCGCGCACACGTCACACAACCACAACAAAGACACATGCGGAGGGAACTGATGA
ATTTCACGAGCAGGAGATTC

Downstream 100 bases:

>100_bases
CCGCTGAGACGTCCGCAACAAAGGCCCGGCACGGTCGCAAAGACCGTGCCGGTCGACCAAACAAATAACAATCTGGAGGG
ATCGAGATGCGCACGAATCG

Product: quinoprotein ethanol dehydrogenase

Products: NA

Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MAGISTVAFLVAGTLGVRANDSAMKAAAEPGAWAMAGHDYGNTRFSPLKEINTENAGKLSLVYSFSLASLRSNEASPIVI
GNTLYVSTSWGPKYVYALDAATGARKWTYEPEIPDDTLQYACCDVNSRGITYADGKLFVGRLDGKLTALDAATGKELWTA
KVVDYKQGSVITSPPLVVRDKVITGFGGGEYGVRGSLQAYDINSGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLV
GSYDPKSDTVYWGTSNPGPWNTAVRSTGNGDFGKLTNLYTASTLALDPNTGKIKWHIQTTPADAWDYDGVNEAVLADLNV
GGAAVPTLMKADRNGFFFVANRETGKVISAEKYVFANWAQKWDTSTLRAVEDPDKRPGPGHPVKDVCPNLIGGKNWQPMS
YSPDTGLVYIPANNVCMDWSVGDVSYKRGVFYLGAEFPTKEGPGGFLGELIAWDPVNNKKVWSIQEDLPFNGGTLSTAGG
LVFSGNLHGDFRAIDAKSGKILWKKNLGSGIGAGPVTYSVDGKQYVAVVVGRTASIPAFLGEIGKKMTNAAPEGGALFVF
AVQ

Sequences:

>Translated_563_residues
MAGISTVAFLVAGTLGVRANDSAMKAAAEPGAWAMAGHDYGNTRFSPLKEINTENAGKLSLVYSFSLASLRSNEASPIVI
GNTLYVSTSWGPKYVYALDAATGARKWTYEPEIPDDTLQYACCDVNSRGITYADGKLFVGRLDGKLTALDAATGKELWTA
KVVDYKQGSVITSPPLVVRDKVITGFGGGEYGVRGSLQAYDINSGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLV
GSYDPKSDTVYWGTSNPGPWNTAVRSTGNGDFGKLTNLYTASTLALDPNTGKIKWHIQTTPADAWDYDGVNEAVLADLNV
GGAAVPTLMKADRNGFFFVANRETGKVISAEKYVFANWAQKWDTSTLRAVEDPDKRPGPGHPVKDVCPNLIGGKNWQPMS
YSPDTGLVYIPANNVCMDWSVGDVSYKRGVFYLGAEFPTKEGPGGFLGELIAWDPVNNKKVWSIQEDLPFNGGTLSTAGG
LVFSGNLHGDFRAIDAKSGKILWKKNLGSGIGAGPVTYSVDGKQYVAVVVGRTASIPAFLGEIGKKMTNAAPEGGALFVF
AVQ
>Mature_562_residues
AGISTVAFLVAGTLGVRANDSAMKAAAEPGAWAMAGHDYGNTRFSPLKEINTENAGKLSLVYSFSLASLRSNEASPIVIG
NTLYVSTSWGPKYVYALDAATGARKWTYEPEIPDDTLQYACCDVNSRGITYADGKLFVGRLDGKLTALDAATGKELWTAK
VVDYKQGSVITSPPLVVRDKVITGFGGGEYGVRGSLQAYDINSGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLVG
SYDPKSDTVYWGTSNPGPWNTAVRSTGNGDFGKLTNLYTASTLALDPNTGKIKWHIQTTPADAWDYDGVNEAVLADLNVG
GAAVPTLMKADRNGFFFVANRETGKVISAEKYVFANWAQKWDTSTLRAVEDPDKRPGPGHPVKDVCPNLIGGKNWQPMSY
SPDTGLVYIPANNVCMDWSVGDVSYKRGVFYLGAEFPTKEGPGGFLGELIAWDPVNNKKVWSIQEDLPFNGGTLSTAGGL
VFSGNLHGDFRAIDAKSGKILWKKNLGSGIGAGPVTYSVDGKQYVAVVVGRTASIPAFLGEIGKKMTNAAPEGGALFVFA
VQ

Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]

COG id: COG4993

COG function: function code G; Glucose dehydrogenase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Escherichia coli, GI1786316, Length=562, Percent_Identity=25.6227758007117, Blast_Score=145, Evalue=8e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR019556
- InterPro:   IPR019551
- InterPro:   IPR018391
- InterPro:   IPR017512
- InterPro:   IPR002372
- InterPro:   IPR011047
- InterPro:   IPR001479 [H]

Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]

EC number: =1.1.98.1 [H]

Molecular weight: Translated: 59888; Mature: 59757

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGISTVAFLVAGTLGVRANDSAMKAAAEPGAWAMAGHDYGNTRFSPLKEINTENAGKLS
CCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCEEE
LVYSFSLASLRSNEASPIVIGNTLYVSTSWGPKYVYALDAATGARKWTYEPEIPDDTLQY
EEEEEEEHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCHHHEE
ACCDVNSRGITYADGKLFVGRLDGKLTALDAATGKELWTAKVVDYKQGSVITSPPLVVRD
EEECCCCCCEEEECCEEEEEEECCEEEEEECCCCCCEEEEEEEEECCCCEEECCCEEEEE
KVITGFGGGEYGVRGSLQAYDINSGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLV
EEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
GSYDPKSDTVYWGTSNPGPWNTAVRSTGNGDFGKLTNLYTASTLALDPNTGKIKWHIQTT
ECCCCCCCEEEEECCCCCCCCHHEECCCCCCCHHHHEEEEEEEEEECCCCCEEEEEEEEC
PADAWDYDGVNEAVLADLNVGGAAVPTLMKADRNGFFFVANRETGKVISAEKYVFANWAQ
CCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEEECCCCCEEECCEEEEEHHHH
KWDTSTLRAVEDPDKRPGPGHPVKDVCPNLIGGKNWQPMSYSPDTGLVYIPANNVCMDWS
HCCCCCEEECCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEE
VGDVSYKRGVFYLGAEFPTKEGPGGFLGELIAWDPVNNKKVWSIQEDLPFNGGTLSTAGG
CCCCCCCCCEEEEECCCCCCCCCCCHHHHEEEECCCCCCEEEEEHHCCCCCCCEEECCCC
LVFSGNLHGDFRAIDAKSGKILWKKNLGSGIGAGPVTYSVDGKQYVAVVVGRTASIPAFL
EEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHH
GEIGKKMTNAAPEGGALFVFAVQ
HHHHHHHHCCCCCCCEEEEEEEC
>Mature Secondary Structure 
AGISTVAFLVAGTLGVRANDSAMKAAAEPGAWAMAGHDYGNTRFSPLKEINTENAGKLS
CCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCEEE
LVYSFSLASLRSNEASPIVIGNTLYVSTSWGPKYVYALDAATGARKWTYEPEIPDDTLQY
EEEEEEEHHHCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCEEEECCCCCCHHHEE
ACCDVNSRGITYADGKLFVGRLDGKLTALDAATGKELWTAKVVDYKQGSVITSPPLVVRD
EEECCCCCCEEEECCEEEEEEECCEEEEEECCCCCCEEEEEEEEECCCCEEECCCEEEEE
KVITGFGGGEYGVRGSLQAYDINSGKMVWQTYTVPAPGEPGSETWKGDTGLHGGGAAWLV
EEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
GSYDPKSDTVYWGTSNPGPWNTAVRSTGNGDFGKLTNLYTASTLALDPNTGKIKWHIQTT
ECCCCCCCEEEEECCCCCCCCHHEECCCCCCCHHHHEEEEEEEEEECCCCCEEEEEEEEC
PADAWDYDGVNEAVLADLNVGGAAVPTLMKADRNGFFFVANRETGKVISAEKYVFANWAQ
CCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEEECCCCCEEECCEEEEEHHHH
KWDTSTLRAVEDPDKRPGPGHPVKDVCPNLIGGKNWQPMSYSPDTGLVYIPANNVCMDWS
HCCCCCEEECCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEE
VGDVSYKRGVFYLGAEFPTKEGPGGFLGELIAWDPVNNKKVWSIQEDLPFNGGTLSTAGG
CCCCCCCCCEEEEECCCCCCCCCCCHHHHEEEECCCCCCEEEEEHHCCCCCCCEEECCCC
LVFSGNLHGDFRAIDAKSGKILWKKNLGSGIGAGPVTYSVDGKQYVAVVVGRTASIPAFL
EEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHH
GEIGKKMTNAAPEGGALFVFAVQ
HHHHHHHHCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]