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The map label for this gene is yobV [H]

Identifier: 146338500

GI number: 146338500

Start: 1516266

End: 1517246

Strand: Reverse

Name: yobV [H]

Synonym: BRADO1418

Alternate gene names: 146338500

Gene position: 1517246-1516266 (Counterclockwise)

Preceding gene: 146338502

Following gene: 146338495

Centisome position: 20.35

GC content: 70.64

Gene sequence:

>981_bases
ATGCGCGCGAGCCGGCTGCTCTCCATTCTCACGACGTTGCAGGCCAAGGGCCAGGTCACGGCGCCCGAGCTTGCGCAAGC
CTGCGAGGTCTCGGTGCGCACGATCTATCGCGACATCGATGCGCTGTCGGCCGCGGGCATTCCCGTCTATGCCGAGCGCG
GCGCCGAAGGCGGGTTCCGCCTGCTCGACGGCTATCGCGTGCGGCTGAACGGGCTCTCGCCGGCGGAGACCGACGCGCTG
TTCATGGCCGGCCTGCCCGGCCCGGCGGCTGCGCTGGGCCTCGACGATGCGATGAGCACGGCGCAGACCAAGCTGGTCGC
GGCGCTGCCGGAGAACCTGCGCGCGAATGCCGGACGGATGCAGGTGCGCTTCCATCTCGACGCGCCCGGCTGGTTCGGCG
AGTCCGAGGAGCCGCCGTATCTGCGCACGATCGCCGAGGCGCTGCTGCGCGACGTCATGATCGACATCCGCTATCAGGCC
TGGCGCGCCGAGAAACGCCGCCGCGTCGCCCCGCTCGGCCTCGTACTCAAGGGCGGCGGCTGGTATCTCGCCGGACAGGT
CGAGCGCAGCGTGCGGACCTATCGGGTGGCGCGCATCCTCGACTGTGCCGTCACCGACGAGCGCTTCGCGAGGCCGGACG
ATTTCGACCTCGCCGCCTATTGGCGCGCCGCGACCGAGCGGCTGGAGGCGGAGCTGCATCCGAACACGGCGACGGTGCGG
CTCTCACCGCTCGGCGTGAAGCTGCTGGAGGTGTGGAGCCAGCCCTACGTGCGCGCCCGCATCCGCCTCGCTGATGACGC
CGATGCCGATGGCTGGCGCGTCGCGACCATCCCGACAGGAACGACACTGTGGCATGCGGCCGGCGAGTTGCTGCGGTTCG
GACCCGAGGCCGAGGTGCTCGACCCGCCAGAGTTGCGCGCGAAGATGGTCGAGCTGGGGCAGGCGATGACGCAACGCTAC
GCCGCTTCGGCAACCGTGTGA

Upstream 100 bases:

>100_bases
GTCGGCGGTCATCGTGGCTCCTCCCGTGTCCTTCTGCGAAGCCCTTGGCTTGTCGCACAGCATACCTGACAATCCATGTC
AGGTATGTTTTAAGGGAGGC

Downstream 100 bases:

>100_bases
GTTGCAAACATCGCGCTCAGGTCCACCCGGTTCAGCGCGAGCCAGCCTCGTAGCCCGGATGAGCGCAGCGATATCCGGGT
TCCCCGATGCAGCGCGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MRASRLLSILTTLQAKGQVTAPELAQACEVSVRTIYRDIDALSAAGIPVYAERGAEGGFRLLDGYRVRLNGLSPAETDAL
FMAGLPGPAAALGLDDAMSTAQTKLVAALPENLRANAGRMQVRFHLDAPGWFGESEEPPYLRTIAEALLRDVMIDIRYQA
WRAEKRRRVAPLGLVLKGGGWYLAGQVERSVRTYRVARILDCAVTDERFARPDDFDLAAYWRAATERLEAELHPNTATVR
LSPLGVKLLEVWSQPYVRARIRLADDADADGWRVATIPTGTTLWHAAGELLRFGPEAEVLDPPELRAKMVELGQAMTQRY
AASATV

Sequences:

>Translated_326_residues
MRASRLLSILTTLQAKGQVTAPELAQACEVSVRTIYRDIDALSAAGIPVYAERGAEGGFRLLDGYRVRLNGLSPAETDAL
FMAGLPGPAAALGLDDAMSTAQTKLVAALPENLRANAGRMQVRFHLDAPGWFGESEEPPYLRTIAEALLRDVMIDIRYQA
WRAEKRRRVAPLGLVLKGGGWYLAGQVERSVRTYRVARILDCAVTDERFARPDDFDLAAYWRAATERLEAELHPNTATVR
LSPLGVKLLEVWSQPYVRARIRLADDADADGWRVATIPTGTTLWHAAGELLRFGPEAEVLDPPELRAKMVELGQAMTQRY
AASATV
>Mature_326_residues
MRASRLLSILTTLQAKGQVTAPELAQACEVSVRTIYRDIDALSAAGIPVYAERGAEGGFRLLDGYRVRLNGLSPAETDAL
FMAGLPGPAAALGLDDAMSTAQTKLVAALPENLRANAGRMQVRFHLDAPGWFGESEEPPYLRTIAEALLRDVMIDIRYQA
WRAEKRRRVAPLGLVLKGGGWYLAGQVERSVRTYRVARILDCAVTDERFARPDDFDLAAYWRAATERLEAELHPNTATVR
LSPLGVKLLEVWSQPYVRARIRLADDADADGWRVATIPTGTTLWHAAGELLRFGPEAEVLDPPELRAKMVELGQAMTQRY
AASATV

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 35824; Mature: 35824

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASRLLSILTTLQAKGQVTAPELAQACEVSVRTIYRDIDALSAAGIPVYAERGAEGGFR
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEE
LLDGYRVRLNGLSPAETDALFMAGLPGPAAALGLDDAMSTAQTKLVAALPENLRANAGRM
EECCEEEEECCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCHHHCCCCCEE
QVRFHLDAPGWFGESEEPPYLRTIAEALLRDVMIDIRYQAWRAEKRRRVAPLGLVLKGGG
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
WYLAGQVERSVRTYRVARILDCAVTDERFARPDDFDLAAYWRAATERLEAELHPNTATVR
EEEEHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHEECCCEEEEE
LSPLGVKLLEVWSQPYVRARIRLADDADADGWRVATIPTGTTLWHAAGELLRFGPEAEVL
ECCCCHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCC
DPPELRAKMVELGQAMTQRYAASATV
CCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRASRLLSILTTLQAKGQVTAPELAQACEVSVRTIYRDIDALSAAGIPVYAERGAEGGFR
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEE
LLDGYRVRLNGLSPAETDALFMAGLPGPAAALGLDDAMSTAQTKLVAALPENLRANAGRM
EECCEEEEECCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCHHHCCCCCEE
QVRFHLDAPGWFGESEEPPYLRTIAEALLRDVMIDIRYQAWRAEKRRRVAPLGLVLKGGG
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
WYLAGQVERSVRTYRVARILDCAVTDERFARPDDFDLAAYWRAATERLEAELHPNTATVR
EEEEHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHHHEECCCEEEEE
LSPLGVKLLEVWSQPYVRARIRLADDADADGWRVATIPTGTTLWHAAGELLRFGPEAEVL
ECCCCHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCC
DPPELRAKMVELGQAMTQRYAASATV
CCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]