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The map label for this gene is ccmD [H]

Identifier: 146337535

GI number: 146337535

Start: 394175

End: 394354

Strand: Reverse

Name: ccmD [H]

Synonym: BRADO0389

Alternate gene names: 146337535

Gene position: 394354-394175 (Counterclockwise)

Preceding gene: 146337536

Following gene: 146337534

Centisome position: 5.29

GC content: 68.89

Gene sequence:

>180_bases
ATGGACCTCGGCCCCTACACCTCGTTTATCGCCACCTCGTACCTCGCCGCAGCCCTCGTCGTCGTGCTGCTGATCGCCTG
GATCGCGATCGACTACCGCACCCAGAAGGCGCGGCTGCGCGCGCTCGAGGACAGCGGCATCAGCCGCCGCTCCGGCCGCG
CCGCCACGGACATGCAATGA

Upstream 100 bases:

>100_bases
CGCCGGCGCGTGCGCAGCCTGCAGATGATGCAGGCGCGGTCTTATCAGGGCAGCGCGCCGTCCGGCGGCGCAACCAGCCA
GATCGTGGGAGCCGCCTGAC

Downstream 100 bases:

>100_bases
CCGACCAGACCGCCCCCGAGGCCGCGCCGCGACGGCGCTCGCTGTTGATGCTGCTGCCGCTCGTGGTGTTTCTCGGGCTG
GCGGCGCTGTTCTGGTTTCG

Product: heme exporter protein D

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycX [H]

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MDLGPYTSFIATSYLAAALVVVLLIAWIAIDYRTQKARLRALEDSGISRRSGRAATDMQ

Sequences:

>Translated_59_residues
MDLGPYTSFIATSYLAAALVVVLLIAWIAIDYRTQKARLRALEDSGISRRSGRAATDMQ
>Mature_59_residues
MDLGPYTSFIATSYLAAALVVVLLIAWIAIDYRTQKARLRALEDSGISRRSGRAATDMQ

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmD/CycX/HelD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007078 [H]

Pfam domain/function: PF04995 CcmD [H]

EC number: NA

Molecular weight: Translated: 6489; Mature: 6489

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLGPYTSFIATSYLAAALVVVLLIAWIAIDYRTQKARLRALEDSGISRRSGRAATDMQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLGPYTSFIATSYLAAALVVVLLIAWIAIDYRTQKARLRALEDSGISRRSGRAATDMQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1850420; 12597275 [H]