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The map label for this gene is ccmC [H]

Identifier: 146337536

GI number: 146337536

Start: 394356

End: 395132

Strand: Reverse

Name: ccmC [H]

Synonym: BRADO0390

Alternate gene names: 146337536

Gene position: 395132-394356 (Counterclockwise)

Preceding gene: 146337537

Following gene: 146337535

Centisome position: 5.3

GC content: 67.44

Gene sequence:

>777_bases
ATGTCGCTGATCGACCTCGCCAATCCCACCAGGTTCCTCGCGCTGGCCGCGCGCCTCTTGCCGTGGCTGGCGCTGGTCAC
CGTCGCGCTGCTGGCCGCCGGCCTGTACCTGTCGGCGCTGGCGCCCGACGACTACCAGCAGGGCGCGACCGTCAAGATCA
TGTTCATCCACGTACCCAATGCGTGGCTGTCGATGTTCGTCTGGGGCGTCATGAGCATCGCCTCGCTCGGCACGCTGGTG
TGGCGGCATCCGCTCGCCGATGTCGCCGCCAAGGCTGCCGCGCCGATCGGCGCCAGCTTCACCTTTCTCGCCCTGCTGAC
CGGCTCGCTGTGGGGTCGGCCGATGTGGGGCACCTATTGGGAGTGGGACGCCCGGCTGACCTCGGTGCTGATCCTGTTCC
TGATGTATCTCGGCCTGATAGCGCTGTGGCGCTCGGTCGAGGATCCCACGCGCGCCGCGCGCGCCGCCGCGGTTCTGACA
TTGGTTGGCGCGATCAACCTGCCGATCATCAAGTTCTCGGTCGACTGGTGGAACACGCTGCACCAGCCGGCCTCGGTGAT
GCGGATGGGCGGACCTGCGCTCGACAAGGCCTTCCTGATCCCGCTCCTGGTGATGGCGATCGGCTTCTCGTTCCTGTTCA
TCACCCTGCACGTTGCAGCCATGCGCAACGAGATCCTGCGCCGGCGCGTGCGCAGCCTGCAGATGATGCAGGCGCGGTCT
TATCAGGGCAGCGCGCCGTCCGGCGGCGCAACCAGCCAGATCGTGGGAGCCGCCTGA

Upstream 100 bases:

>100_bases
TGGACTAACGGAACACCGGCGGGGTTTGACCATGATCAACTCTTGCCGAGCTGTCCTGTGCTGATGGACTGTAAACGTTT
CCGCCTTTAACAAGGGCCTC

Downstream 100 bases:

>100_bases
CATGGACCTCGGCCCCTACACCTCGTTTATCGCCACCTCGTACCTCGCCGCAGCCCTCGTCGTCGTGCTGCTGATCGCCT
GGATCGCGATCGACTACCGC

Product: heme ABC transporter permease

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycZ [H]

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSLIDLANPTRFLALAARLLPWLALVTVALLAAGLYLSALAPDDYQQGATVKIMFIHVPNAWLSMFVWGVMSIASLGTLV
WRHPLADVAAKAAAPIGASFTFLALLTGSLWGRPMWGTYWEWDARLTSVLILFLMYLGLIALWRSVEDPTRAARAAAVLT
LVGAINLPIIKFSVDWWNTLHQPASVMRMGGPALDKAFLIPLLVMAIGFSFLFITLHVAAMRNEILRRRVRSLQMMQARS
YQGSAPSGGATSQIVGAA

Sequences:

>Translated_258_residues
MSLIDLANPTRFLALAARLLPWLALVTVALLAAGLYLSALAPDDYQQGATVKIMFIHVPNAWLSMFVWGVMSIASLGTLV
WRHPLADVAAKAAAPIGASFTFLALLTGSLWGRPMWGTYWEWDARLTSVLILFLMYLGLIALWRSVEDPTRAARAAAVLT
LVGAINLPIIKFSVDWWNTLHQPASVMRMGGPALDKAFLIPLLVMAIGFSFLFITLHVAAMRNEILRRRVRSLQMMQARS
YQGSAPSGGATSQIVGAA
>Mature_257_residues
SLIDLANPTRFLALAARLLPWLALVTVALLAAGLYLSALAPDDYQQGATVKIMFIHVPNAWLSMFVWGVMSIASLGTLVW
RHPLADVAAKAAAPIGASFTFLALLTGSLWGRPMWGTYWEWDARLTSVLILFLMYLGLIALWRSVEDPTRAARAAAVLTL
VGAINLPIIKFSVDWWNTLHQPASVMRMGGPALDKAFLIPLLVMAIGFSFLFITLHVAAMRNEILRRRVRSLQMMQARSY
QGSAPSGGATSQIVGAA

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=232, Percent_Identity=46.9827586206897, Blast_Score=202, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 28134; Mature: 28003

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIDLANPTRFLALAARLLPWLALVTVALLAAGLYLSALAPDDYQQGATVKIMFIHVPN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEEECCH
AWLSMFVWGVMSIASLGTLVWRHPLADVAAKAAAPIGASFTFLALLTGSLWGRPMWGTYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCH
EWDARLTSVLILFLMYLGLIALWRSVEDPTRAARAAAVLTLVGAINLPIIKFSVDWWNTL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH
HQPASVMRMGGPALDKAFLIPLLVMAIGFSFLFITLHVAAMRNEILRRRVRSLQMMQARS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YQGSAPSGGATSQIVGAA
CCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
SLIDLANPTRFLALAARLLPWLALVTVALLAAGLYLSALAPDDYQQGATVKIMFIHVPN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEEECCH
AWLSMFVWGVMSIASLGTLVWRHPLADVAAKAAAPIGASFTFLALLTGSLWGRPMWGTYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCH
EWDARLTSVLILFLMYLGLIALWRSVEDPTRAARAAAVLTLVGAINLPIIKFSVDWWNTL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH
HQPASVMRMGGPALDKAFLIPLLVMAIGFSFLFITLHVAAMRNEILRRRVRSLQMMQARS
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YQGSAPSGGATSQIVGAA
CCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1850420; 12597275 [H]