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The map label for this gene is yxnA [H]

Identifier: 146301626

GI number: 146301626

Start: 4633543

End: 4634523

Strand: Direct

Name: yxnA [H]

Synonym: Fjoh_3887

Alternate gene names: 146301626

Gene position: 4633543-4634523 (Clockwise)

Preceding gene: 146301622

Following gene: 146301629

Centisome position: 76.0

GC content: 40.37

Gene sequence:

>981_bases
ATGACAGATAAAACAATAGTCCAAAATAGCCTTAAAGGGAAAAACGTTGTCATTACAGGAGCAAGCAGCGGTGTAGGCAG
AGCTGCGGCGGAAGCATTTGCCCATGAAGGATGCAACCTGATCTTAGCGGCCAGAGGACAGGAAGGATTAGATGAAATAG
TGAAATTCTGCCGTGAATTAGGTATGCAGGCTGTTGGCGTTTCGGCAGATATGTCTATTCCAGAGCAGGTAGAAAAAGTA
GCCGCATCAGCTGCATCAATAGGAGGGAAAATCGATATATGGGTCAACAATGCGGGAGTTATGGCCAGCGGGAAATTTGA
AGAAATCCCTTTAGAAATCCATCATCAGGTAATCAAGACCAATTTGTTTGGCTACATGCACGGAGCTTATAATGCCATTA
AAATTTTTAAAACACAAAATGAAGGTATTTTAATTAATAACATATCGATAGGCGGTTATATGCCAGCACCTTACAGTGCG
GTTTATTCTGCCAGCAAATATGGAATAAGGGGTCTCATGGAATGCCTGCAGGGTGAAATATCAAACCGAAAGCACATTCA
CATCTGCAATCTTTATCCGCAGCTCCAAAACTCTACTGGTAATCTTCATTCAGCAAAATATTCCGGTTTTGATATGACAA
TACCTTTTATTGCGTCAGATCCTCGTGATACAGCCTCTAAAATGGTAGAACTCGCTAAAAATCCTAAAAAAGATCTGTTC
CCAGATTTTAAGGCTGCCGCCGCCACAAACCTTTACAGATTATTTCCTAAAGTAATTATCAACGCTGCATCTGCAGTTGT
GCGTACTAAAATGGAATTTAATAAGAATAAGGAAAATAACCCCGGTAATGTTTTGACGAAGTCAAAAGAACCGCTGCGAG
TTTACGGAAATCCATCTGCAAAAAACACATCAGATCTTAAACTGGCAATGTTTGCCGGAATTGGAATTGGTATCGGCCTG
CTTTTATTTCATAAAAAATAA

Upstream 100 bases:

>100_bases
AAGCACTTCAAGCAGAGCTAATGAAAAAAGCAGTGTCACGACATTCAAAAATATACTCACCCACTTCAATTTATAAGTTA
ACCATCTAAATAATAGAATT

Downstream 100 bases:

>100_bases
AGCATGGTACTGTTTTACTTTAGGATTGTAGAGGGCTTGATGAAAAATCGGAAAAATTTGGAATCAAAGTTGAAGGTTCA
ATATAATGCGGATTCTTGCT

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTDKTIVQNSLKGKNVVITGASSGVGRAAAEAFAHEGCNLILAARGQEGLDEIVKFCRELGMQAVGVSADMSIPEQVEKV
AASAASIGGKIDIWVNNAGVMASGKFEEIPLEIHHQVIKTNLFGYMHGAYNAIKIFKTQNEGILINNISIGGYMPAPYSA
VYSASKYGIRGLMECLQGEISNRKHIHICNLYPQLQNSTGNLHSAKYSGFDMTIPFIASDPRDTASKMVELAKNPKKDLF
PDFKAAAATNLYRLFPKVIINAASAVVRTKMEFNKNKENNPGNVLTKSKEPLRVYGNPSAKNTSDLKLAMFAGIGIGIGL
LLFHKK

Sequences:

>Translated_326_residues
MTDKTIVQNSLKGKNVVITGASSGVGRAAAEAFAHEGCNLILAARGQEGLDEIVKFCRELGMQAVGVSADMSIPEQVEKV
AASAASIGGKIDIWVNNAGVMASGKFEEIPLEIHHQVIKTNLFGYMHGAYNAIKIFKTQNEGILINNISIGGYMPAPYSA
VYSASKYGIRGLMECLQGEISNRKHIHICNLYPQLQNSTGNLHSAKYSGFDMTIPFIASDPRDTASKMVELAKNPKKDLF
PDFKAAAATNLYRLFPKVIINAASAVVRTKMEFNKNKENNPGNVLTKSKEPLRVYGNPSAKNTSDLKLAMFAGIGIGIGL
LLFHKK
>Mature_325_residues
TDKTIVQNSLKGKNVVITGASSGVGRAAAEAFAHEGCNLILAARGQEGLDEIVKFCRELGMQAVGVSADMSIPEQVEKVA
ASAASIGGKIDIWVNNAGVMASGKFEEIPLEIHHQVIKTNLFGYMHGAYNAIKIFKTQNEGILINNISIGGYMPAPYSAV
YSASKYGIRGLMECLQGEISNRKHIHICNLYPQLQNSTGNLHSAKYSGFDMTIPFIASDPRDTASKMVELAKNPKKDLFP
DFKAAAATNLYRLFPKVIINAASAVVRTKMEFNKNKENNPGNVLTKSKEPLRVYGNPSAKNTSDLKLAMFAGIGIGIGLL
LFHKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4503817, Length=199, Percent_Identity=30.6532663316583, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI20149619, Length=273, Percent_Identity=24.9084249084249, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI32455239, Length=190, Percent_Identity=30, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI5031765, Length=190, Percent_Identity=30, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI157739938, Length=290, Percent_Identity=25.5172413793103, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI38348362, Length=173, Percent_Identity=31.7919075144509, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI38424085, Length=173, Percent_Identity=31.7919075144509, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI4504505, Length=192, Percent_Identity=31.25, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI7706318, Length=182, Percent_Identity=26.9230769230769, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI31542939, Length=172, Percent_Identity=31.3953488372093, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=31.3953488372093, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI210032110, Length=178, Percent_Identity=28.0898876404494, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI40807363, Length=236, Percent_Identity=27.9661016949153, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI142976729, Length=252, Percent_Identity=23.8095238095238, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI32483357, Length=189, Percent_Identity=24.8677248677249, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87082160, Length=187, Percent_Identity=29.9465240641711, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787335, Length=173, Percent_Identity=29.4797687861272, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082100, Length=230, Percent_Identity=30, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787905, Length=117, Percent_Identity=30.7692307692308, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71997402, Length=186, Percent_Identity=34.9462365591398, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17570069, Length=186, Percent_Identity=33.8709677419355, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17567345, Length=193, Percent_Identity=30.0518134715026, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI193203115, Length=191, Percent_Identity=27.2251308900524, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193203117, Length=186, Percent_Identity=27.9569892473118, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17564282, Length=177, Percent_Identity=28.8135593220339, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562904, Length=116, Percent_Identity=34.4827586206897, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=227, Percent_Identity=30.3964757709251, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322861, Length=179, Percent_Identity=29.0502793296089, Blast_Score=66, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24580925, Length=180, Percent_Identity=28.8888888888889, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21358495, Length=210, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24644339, Length=194, Percent_Identity=31.4432989690722, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI21355631, Length=211, Percent_Identity=25.5924170616114, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24649181, Length=274, Percent_Identity=24.4525547445255, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571526, Length=175, Percent_Identity=29.1428571428571, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI281364892, Length=255, Percent_Identity=25.8823529411765, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI23397609, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21357041, Length=208, Percent_Identity=27.8846153846154, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI17737361, Length=199, Percent_Identity=29.6482412060301, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356301, Length=191, Percent_Identity=28.2722513089005, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24644337, Length=160, Percent_Identity=31.875, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35236; Mature: 35105

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKTIVQNSLKGKNVVITGASSGVGRAAAEAFAHEGCNLILAARGQEGLDEIVKFCREL
CCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHC
GMQAVGVSADMSIPEQVEKVAASAASIGGKIDIWVNNAGVMASGKFEEIPLEIHHQVIKT
CCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHH
NLFGYMHGAYNAIKIFKTQNEGILINNISIGGYMPAPYSAVYSASKYGIRGLMECLQGEI
HHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SNRKHIHICNLYPQLQNSTGNLHSAKYSGFDMTIPFIASDPRDTASKMVELAKNPKKDLF
CCCCEEEEEECCHHHCCCCCCCCCCEECCCEEEEEEEECCCHHHHHHHHHHHCCCCHHCC
PDFKAAAATNLYRLFPKVIINAASAVVRTKMEFNKNKENNPGNVLTKSKEPLRVYGNPSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCC
KNTSDLKLAMFAGIGIGIGLLLFHKK
CCCCCEEEEEHHHHHHHEEEEEEECC
>Mature Secondary Structure 
TDKTIVQNSLKGKNVVITGASSGVGRAAAEAFAHEGCNLILAARGQEGLDEIVKFCREL
CCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHC
GMQAVGVSADMSIPEQVEKVAASAASIGGKIDIWVNNAGVMASGKFEEIPLEIHHQVIKT
CCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHH
NLFGYMHGAYNAIKIFKTQNEGILINNISIGGYMPAPYSAVYSASKYGIRGLMECLQGEI
HHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SNRKHIHICNLYPQLQNSTGNLHSAKYSGFDMTIPFIASDPRDTASKMVELAKNPKKDLF
CCCCEEEEEECCHHHCCCCCCCCCCEECCCEEEEEEEECCCHHHHHHHHHHHCCCCHHCC
PDFKAAAATNLYRLFPKVIINAASAVVRTKMEFNKNKENNPGNVLTKSKEPLRVYGNPSA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCC
KNTSDLKLAMFAGIGIGIGLLLFHKK
CCCCCEEEEEHHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]