The gene/protein map for NC_009441 is currently unavailable.
Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301615

Identifier: 146301615

GI number: 146301615

Start: 4612623

End: 4614920

Strand: Reverse

Name: 146301615

Synonym: Fjoh_3876

Alternate gene names: NA

Gene position: 4614920-4612623 (Counterclockwise)

Preceding gene: 146301616

Following gene: 146301614

Centisome position: 75.69

GC content: 35.47

Gene sequence:

>2298_bases
ATGGTAAATATCTTTGAGAAATATAATAAACTAGGATGTTTAATAGCAGTATGCATTACATTTTCAGCAGCAGCTCAAAT
GAAAACATTTCCGTTACAGGAAGTGAGATTAGAAGACGGACCTTTTAAAAAGGCACAAGATGTTGATCTTAAATATATAC
TTGCCCTTAATCCCGATAAGCTTCTTGCGCCTTATTTAATTGATGCTGGTCTTCCGGTAAAGTCAACTCGTTACGGTAAT
TGGGAAAGTCTGGGGCTTGACGGTCATATTGCCGGACATTATTTATCGGCCTTGTCTATGATGTATGCTTCTACAGGAAA
TCCTGAGCTTAAAAACAGATTAGATTATATGATTTCTGAATTAGCCAGATGTCAGGATAAAAACGGAAATGGATATGTTG
GCGGGATTCCGCAGGGAAAAGTTTTTTGGGACCGCATTCATAAAGGAGATATTGACGGAAGCAGTTTTGGCTTAAACAAT
ACCTGGGTTCCCATTTACAATATCCATAAACTTTTTGCAGGATTAAACGATGCTTATCAATATACAGGAAACCAGCAGGC
AAAAGAAGTTTTAATAAAATTGGGAGACTGGTTTATTGAAATGATAAAACCGCTGAGTGACGATCAGATCCAGAAAATTC
TAAAAACAGAACACGGAGGCATCAACGAGTCTTTTGCAGATTTATATCTTATTACGAAGGATAAAAAATATCTGGAAACA
GCTCAAAAAATTTCCCAAAAGAGTTTTTTAGAATCTTTAATAAAGAAAGAAGATAAACTTACCGGGCTTCATGCCAATAC
TCAAATTCCTAAAGTTATTGGTTTTGAAAAAATTGCTTCTATTTCAGCAGATAAAGAATGGTCAGAAGCAGTTACTTTTT
TTTGGGATAATGTAACTCAAAAACGAAGCGTGGCTTTTGGCGGTAACAGTGTTTCAGAACATTTTAATCCTGTCAATGAT
TTCAGCGGCATGCTTAAGTCAAATGAAGGACCGGAAACCTGTAATTCCTATAACATGGAACGTCTCAGCAAAGCCTTATT
TCTGGAAAAACAAGAAATGAATTATCTCGATTTCTACGAACGCACACTTTACAATCATATATTGTCAAGCCAGCATCCGG
AAAAAGGAGGTTTTGTTTACTTTACACCCATTAGACCCAATCATTATCGGGTTTATTCACAGCCCGAAACCAGTATGTGG
TGCTGTGTAGGATCAGGATTGGAGAATCATACAAAATATGGAGAATTAATTTACAGCCATTTTGATGAGGCTGTTTTTGT
CAATCTCTTTATAGCATCAACCTTAAACTGGAATGAAAAAGGAATTGTAATCGAACAGCGTACAAAATTCCCTTATGAAA
ACAGCACCGAAATTGTTCTTAATCTCAAAAAAGCAAAAACTTTTGATTTAAATATCCGTCGTCCAAAATGGGCAGAAAAC
TTTAGAGTATTCATCAACGATAAAGAACAGAAAACAGAATTAAAACCATCGGGTTATATCAGTCTTAAAAGAAAATGGAA
ATCAAAAGATCATGTACGTATTGAATTTGAAACGAAAACCCATTTAGAGCAATTGCCTGATGGTTCTAACTGGAGCGCTT
TTGTAAACGGCCCAATTGTTTTAGCTGCCAAAACTTCTAAAGAGGCATTAGACGGATTATTTGCGGATGACAGCCGTATG
GGGCATGTCGCTTCGGGAAAATACATGCCAATGGATAAAGCTTATGCGCTTGTAGGCGAAAAAGCAAGTTATGTTTCCAG
ACTTAAAGAACTTGGCAATATGCGTTTTGCTTTGGATTCTTTAGAATTAGAACCCTTTTTTGAACTGCATGATGCACGTT
ATCAAATGTATTTCCAAACTTTTACTAAAGATGAATTTAAAGAAAAACAGGAAATACTGCGACAGCAGGAAATAAAAGAA
ATGGCGCTTGAAGCGAATACCATAGATAAAATTAATTGCGGAGAACAACAGCCCGAAGTTGATCATTTGTACAGAGGAGA
AAAAAGTAATTCAGGATATGACGACGGCCGATTTTGGAGAAATACCCAGTCTTATATTTCCTATCAAATGATAAACAAAG
ACAAATCAGGAAAGTTCCTTGATATAAGTATTTTGGATACAATCAATGCCAATGATATTACTATAACGATCAACAACAAA
CCAGCAGAAATAGTCTCTTTAGAAAATAAAAAAATCAGGCTCGATATTGCAAAACAAGACGTTATAGCAATTAAAATAAC
AGCTAAAGACGGAAAAGTAAGTCCTAAGTTTTACCAATTACGAATAGTAAAAAATTAA

Upstream 100 bases:

>100_bases
TCAGAAGATTTTAATAAATACCGGAGGATTAAAACCGTCTTATCTGGGTGCGCCCGAAAGTGACAGGGTTTCACAGGATT
AGTTTTAATTCAATAAAATT

Downstream 100 bases:

>100_bases
TCGGAAATTTTAAAAGTTCAGAAAATAAAACCATGAAAGTACTCTATAACCTATTAGCGATTTTTTTAATTCTTACCGGA
TCTAATGCGCAGGATAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 765; Mature: 765

Protein sequence:

>765_residues
MVNIFEKYNKLGCLIAVCITFSAAAQMKTFPLQEVRLEDGPFKKAQDVDLKYILALNPDKLLAPYLIDAGLPVKSTRYGN
WESLGLDGHIAGHYLSALSMMYASTGNPELKNRLDYMISELARCQDKNGNGYVGGIPQGKVFWDRIHKGDIDGSSFGLNN
TWVPIYNIHKLFAGLNDAYQYTGNQQAKEVLIKLGDWFIEMIKPLSDDQIQKILKTEHGGINESFADLYLITKDKKYLET
AQKISQKSFLESLIKKEDKLTGLHANTQIPKVIGFEKIASISADKEWSEAVTFFWDNVTQKRSVAFGGNSVSEHFNPVND
FSGMLKSNEGPETCNSYNMERLSKALFLEKQEMNYLDFYERTLYNHILSSQHPEKGGFVYFTPIRPNHYRVYSQPETSMW
CCVGSGLENHTKYGELIYSHFDEAVFVNLFIASTLNWNEKGIVIEQRTKFPYENSTEIVLNLKKAKTFDLNIRRPKWAEN
FRVFINDKEQKTELKPSGYISLKRKWKSKDHVRIEFETKTHLEQLPDGSNWSAFVNGPIVLAAKTSKEALDGLFADDSRM
GHVASGKYMPMDKAYALVGEKASYVSRLKELGNMRFALDSLELEPFFELHDARYQMYFQTFTKDEFKEKQEILRQQEIKE
MALEANTIDKINCGEQQPEVDHLYRGEKSNSGYDDGRFWRNTQSYISYQMINKDKSGKFLDISILDTINANDITITINNK
PAEIVSLENKKIRLDIAKQDVIAIKITAKDGKVSPKFYQLRIVKN

Sequences:

>Translated_765_residues
MVNIFEKYNKLGCLIAVCITFSAAAQMKTFPLQEVRLEDGPFKKAQDVDLKYILALNPDKLLAPYLIDAGLPVKSTRYGN
WESLGLDGHIAGHYLSALSMMYASTGNPELKNRLDYMISELARCQDKNGNGYVGGIPQGKVFWDRIHKGDIDGSSFGLNN
TWVPIYNIHKLFAGLNDAYQYTGNQQAKEVLIKLGDWFIEMIKPLSDDQIQKILKTEHGGINESFADLYLITKDKKYLET
AQKISQKSFLESLIKKEDKLTGLHANTQIPKVIGFEKIASISADKEWSEAVTFFWDNVTQKRSVAFGGNSVSEHFNPVND
FSGMLKSNEGPETCNSYNMERLSKALFLEKQEMNYLDFYERTLYNHILSSQHPEKGGFVYFTPIRPNHYRVYSQPETSMW
CCVGSGLENHTKYGELIYSHFDEAVFVNLFIASTLNWNEKGIVIEQRTKFPYENSTEIVLNLKKAKTFDLNIRRPKWAEN
FRVFINDKEQKTELKPSGYISLKRKWKSKDHVRIEFETKTHLEQLPDGSNWSAFVNGPIVLAAKTSKEALDGLFADDSRM
GHVASGKYMPMDKAYALVGEKASYVSRLKELGNMRFALDSLELEPFFELHDARYQMYFQTFTKDEFKEKQEILRQQEIKE
MALEANTIDKINCGEQQPEVDHLYRGEKSNSGYDDGRFWRNTQSYISYQMINKDKSGKFLDISILDTINANDITITINNK
PAEIVSLENKKIRLDIAKQDVIAIKITAKDGKVSPKFYQLRIVKN
>Mature_765_residues
MVNIFEKYNKLGCLIAVCITFSAAAQMKTFPLQEVRLEDGPFKKAQDVDLKYILALNPDKLLAPYLIDAGLPVKSTRYGN
WESLGLDGHIAGHYLSALSMMYASTGNPELKNRLDYMISELARCQDKNGNGYVGGIPQGKVFWDRIHKGDIDGSSFGLNN
TWVPIYNIHKLFAGLNDAYQYTGNQQAKEVLIKLGDWFIEMIKPLSDDQIQKILKTEHGGINESFADLYLITKDKKYLET
AQKISQKSFLESLIKKEDKLTGLHANTQIPKVIGFEKIASISADKEWSEAVTFFWDNVTQKRSVAFGGNSVSEHFNPVND
FSGMLKSNEGPETCNSYNMERLSKALFLEKQEMNYLDFYERTLYNHILSSQHPEKGGFVYFTPIRPNHYRVYSQPETSMW
CCVGSGLENHTKYGELIYSHFDEAVFVNLFIASTLNWNEKGIVIEQRTKFPYENSTEIVLNLKKAKTFDLNIRRPKWAEN
FRVFINDKEQKTELKPSGYISLKRKWKSKDHVRIEFETKTHLEQLPDGSNWSAFVNGPIVLAAKTSKEALDGLFADDSRM
GHVASGKYMPMDKAYALVGEKASYVSRLKELGNMRFALDSLELEPFFELHDARYQMYFQTFTKDEFKEKQEILRQQEIKE
MALEANTIDKINCGEQQPEVDHLYRGEKSNSGYDDGRFWRNTQSYISYQMINKDKSGKFLDISILDTINANDITITINNK
PAEIVSLENKKIRLDIAKQDVIAIKITAKDGKVSPKFYQLRIVKN

Specific function: Unknown

COG id: COG3533

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87658; Mature: 87658

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNIFEKYNKLGCLIAVCITFSAAAQMKTFPLQEVRLEDGPFKKAQDVDLKYILALNPDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCEEEEEEECCCH
LLAPYLIDAGLPVKSTRYGNWESLGLDGHIAGHYLSALSMMYASTGNPELKNRLDYMISE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LARCQDKNGNGYVGGIPQGKVFWDRIHKGDIDGSSFGLNNTWVPIYNIHKLFAGLNDAYQ
HHHHCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCHHHH
YTGNQQAKEVLIKLGDWFIEMIKPLSDDQIQKILKTEHGGINESFADLYLITKDKKYLET
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHH
AQKISQKSFLESLIKKEDKLTGLHANTQIPKVIGFEKIASISADKEWSEAVTFFWDNVTQ
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHCHHHHHHCCCCCCHHHHHHHHHCCCCC
KRSVAFGGNSVSEHFNPVNDFSGMLKSNEGPETCNSYNMERLSKALFLEKQEMNYLDFYE
CCEEEECCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
RTLYNHILSSQHPEKGGFVYFTPIRPNHYRVYSQPETSMWCCVGSGLENHTKYGELIYSH
HHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHH
FDEAVFVNLFIASTLNWNEKGIVIEQRTKFPYENSTEIVLNLKKAKTFDLNIRRPKWAEN
CCHHHEEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCC
FRVFINDKEQKTELKPSGYISLKRKWKSKDHVRIEFETKTHLEQLPDGSNWSAFVNGPIV
CEEEECCCHHHCCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHCCCCCCCEEEECCCEE
LAAKTSKEALDGLFADDSRMGHVASGKYMPMDKAYALVGEKASYVSRLKELGNMRFALDS
EEECCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCEEEEEC
LELEPFFELHDARYQMYFQTFTKDEFKEKQEILRQQEIKEMALEANTIDKINCGEQQPEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
DHLYRGEKSNSGYDDGRFWRNTQSYISYQMINKDKSGKFLDISILDTINANDITITINNK
HHHHCCCCCCCCCCCCHHHCCHHHHEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCC
PAEIVSLENKKIRLDIAKQDVIAIKITAKDGKVSPKFYQLRIVKN
CCEEEEECCCEEEEEEECCCEEEEEEEECCCCCCCEEEEEEEECC
>Mature Secondary Structure
MVNIFEKYNKLGCLIAVCITFSAAAQMKTFPLQEVRLEDGPFKKAQDVDLKYILALNPDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCEEEEEEECCCH
LLAPYLIDAGLPVKSTRYGNWESLGLDGHIAGHYLSALSMMYASTGNPELKNRLDYMISE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LARCQDKNGNGYVGGIPQGKVFWDRIHKGDIDGSSFGLNNTWVPIYNIHKLFAGLNDAYQ
HHHHCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHCCCHHHH
YTGNQQAKEVLIKLGDWFIEMIKPLSDDQIQKILKTEHGGINESFADLYLITKDKKYLET
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHH
AQKISQKSFLESLIKKEDKLTGLHANTQIPKVIGFEKIASISADKEWSEAVTFFWDNVTQ
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHCHHHHHHCCCCCCHHHHHHHHHCCCCC
KRSVAFGGNSVSEHFNPVNDFSGMLKSNEGPETCNSYNMERLSKALFLEKQEMNYLDFYE
CCEEEECCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
RTLYNHILSSQHPEKGGFVYFTPIRPNHYRVYSQPETSMWCCVGSGLENHTKYGELIYSH
HHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHH
FDEAVFVNLFIASTLNWNEKGIVIEQRTKFPYENSTEIVLNLKKAKTFDLNIRRPKWAEN
CCHHHEEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCC
FRVFINDKEQKTELKPSGYISLKRKWKSKDHVRIEFETKTHLEQLPDGSNWSAFVNGPIV
CEEEECCCHHHCCCCCCCEEEEEECCCCCCCEEEEEECHHHHHHCCCCCCCEEEECCCEE
LAAKTSKEALDGLFADDSRMGHVASGKYMPMDKAYALVGEKASYVSRLKELGNMRFALDS
EEECCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCEEEEEC
LELEPFFELHDARYQMYFQTFTKDEFKEKQEILRQQEIKEMALEANTIDKINCGEQQPEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
DHLYRGEKSNSGYDDGRFWRNTQSYISYQMINKDKSGKFLDISILDTINANDITITINNK
HHHHCCCCCCCCCCCCHHHCCHHHHEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCC
PAEIVSLENKKIRLDIAKQDVIAIKITAKDGKVSPKFYQLRIVKN
CCEEEEECCCEEEEEEECCCEEEEEEEECCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA