Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301616

Identifier: 146301616

GI number: 146301616

Start: 4614939

End: 4617464

Strand: Reverse

Name: 146301616

Synonym: Fjoh_3877

Alternate gene names: NA

Gene position: 4617464-4614939 (Counterclockwise)

Preceding gene: 146301617

Following gene: 146301615

Centisome position: 75.73

GC content: 36.03

Gene sequence:

>2526_bases
ATGAAAAGTCTTTCAACATGGATTGCTTTATTGATTATTTGTATTTACAGCCCTTTAAAAGCGGCAGAACCTTTCATTAC
CCATGAAAAAAGTTCTAACGTTATAGTGCTGAAAGAAAAATCAGTACAGCCGTCTTTTTTCATAAATACTACGCTTGATG
CTGGTATCATGCGCGCCGTATACAATCTCCAATCAGATTTTGAAAAAGTTACGGGTTCAAAACCTGTTATTCTAAATCAA
AACCCAGCAGATTCTTCTCCTCTTATTATAATTGGAATGGCAGGAAATTCAGTCATTGATGATTTAATAAAGCAGAAGAA
AATCAACGGAAAAGATCTTAAAGGGAAAAATGAAAAATTTATTATCCAGCACGTCAAAAATCCATTTAAAGGAGTTGAAG
AAGCCATTGTAATTGCCGGCAGTGACAAACGCGGGACAATTTACGGCATATATGAATTATCCAGACAAATTGGAGTTTCA
CCTTGGTATTACTGGGCAGATGTTCCGGTAAAGAAAAGTGAAACACTTTATTTTATAAAAGGAACGTACAGCGATGGAGA
ACCGGCTGTAAAATACAGAGGAATCTTTTTAAATGATGAAGCTCCCGCATTGAGCGGCTGGGCAAAAAAAACATTCGGCG
GATTTAATAGTAAGTTCTATGAGAAAGTTTTCGAATTATTACTTCGTTTAAAGTCCAATTATATGTGGCCTGCCATGTGG
GGGAATGCTTTTTATGATGATGATCCGTTAAGCGGACCTCTTGCTAATGAAATGGGAATTATAATGGGAACATCCCACCA
TGAACCAATGGCTTTGGCTCAAACAGACTGGCACCGTTATATCAAAAAAAACAATCTTCCTAATGTTTGGGATTATTCTA
AAAACAAAACTGTTTTAGATGAATTCTGGAAAAGCGGTATCGTACGAAGTAAAAATTGGGAAAAACTAGTAACCATAGGT
ATGCGTGGAGACGGCGATGAAGCTATGAGCGAAGGAACTAATATAAGTCTGCTTGAAAATATCGTAAAAGAACAGCGCCG
TATTATTTCGCAGGAAACCGGACAAAGTACAGACAAAACACCTCAGGTTTGGGCTTTATACAAAGAAGTTCAGGATTATT
ACGATCAGGGAATGCGTGTTCCGGACGATGTAATTTTATTATTCTGTGATGATAACTGGGGAAATGTCCGTAAACTTCCA
GATTTAAGAAAACCTCTGCACAAGGGCGGTTACGGTATGTATTATCATTTTGATTACGTTGGAGGTCCAAGAAACTCAAA
ATGGATTAATATAAGTCCGATACAAAGAGTATGGGAACAAATGAATCTTAGTTATGAGCATGGTGTAGATAAAGTCTGGA
TTGTAAATGTTGGTGATCTTAAACCAATGGAATTTCCTATCAGCTTTTTTCTCGATATGGCATGGAATCCTAAGAAATTT
AATCCGCAGAATTTATTTGAATTTACCGAAAAATGGGCTGCAGAGCAGTTTGGAGAAAAACATTCAAAAGAAATTGCCGG
ATTTTTAAATACGTATCCCAAATTCAATCGTCGTGTAACACCAGAAATGCTCGACAGTCAAACTTACAGTCTTGAAAATT
ACAATGAATTTCAAAATGTAGTAAACGATTATAAAAATCTGGCACTTGATGCCTACAGAGTTTATAATGATTTACCAGAG
GAATATAAAGATGCTTATTTCCAGCTCGTTTTATATCCTATAGACGCCTGCAGTAATCTCTATGAAATGTATTTTGCACA
AGCGTTGAATAAAAAATTATACAAACAGAAAGATATTCAGGCTAATTATTATGCCGATTTGGTGAAGACTAAGTTCGCAC
GCGATTCTGTTCTTCAAAACAAATACAATAACGAAATTGCCAATGGAAAATGGCCTCACATGATGGATCAGATGCATATT
GGTTACAAAAACTGGTTTGATACTCCTAAAAATATTTTACCTGAAATACAATATATTACAGCCTCTGAAAAAACAGAACG
AAAAGTATTTGTAGAAAAAGACGGTTATGTTTCTATAGAAGTCGCACATTTTTCTAAAGTAAACGATTCAAAAAGAATTC
ATTGGGAAACAATTCCTGATTTTGGAAAAACAAAAAGCGGTATTACGACATTACCTCAAAACCTTTATCCGGACACAAAG
GAAAATATTTTTGTAGAATATGAAATTGATTTTACTTCGACTGGAACTTTTAATGTTGAATTATTACTAGCGCCTACACT
TAATTTTAACAGCAACAAAGGCCTTCGTTATGAAGTTTCTTTTGATGATGAAAAACCACAGCTTGTAAATTTTAACGGAA
AATATCGCGGCGAACTCGGAAAATGGCAGGCAGAACACATGATCCATTCCCTTACGTCACACCAGATTTTAAAACCAGGC
AGACATACACTGCGTTTTCGCGTACTGGATCCCGGAATAGTTCTTCAGAAGATTTTAATAAATACCGGAGGATTAAAACC
GTCTTATCTGGGTGCGCCCGAAAGTGACAGGGTTTCACAGGATTAG

Upstream 100 bases:

>100_bases
TCACAGTTTTTATTTAAAGAGGTTGATCCCTTAGTTTTTCAAAAATACAGCATATCTGCCTATACTATCGAGAAGTAATT
TTTAATTAAGAGAAAATAAA

Downstream 100 bases:

>100_bases
TTTTAATTCAATAAAATTATGGTAAATATCTTTGAGAAATATAATAAACTAGGATGTTTAATAGCAGTATGCATTACATT
TTCAGCAGCAGCTCAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 841; Mature: 841

Protein sequence:

>841_residues
MKSLSTWIALLIICIYSPLKAAEPFITHEKSSNVIVLKEKSVQPSFFINTTLDAGIMRAVYNLQSDFEKVTGSKPVILNQ
NPADSSPLIIIGMAGNSVIDDLIKQKKINGKDLKGKNEKFIIQHVKNPFKGVEEAIVIAGSDKRGTIYGIYELSRQIGVS
PWYYWADVPVKKSETLYFIKGTYSDGEPAVKYRGIFLNDEAPALSGWAKKTFGGFNSKFYEKVFELLLRLKSNYMWPAMW
GNAFYDDDPLSGPLANEMGIIMGTSHHEPMALAQTDWHRYIKKNNLPNVWDYSKNKTVLDEFWKSGIVRSKNWEKLVTIG
MRGDGDEAMSEGTNISLLENIVKEQRRIISQETGQSTDKTPQVWALYKEVQDYYDQGMRVPDDVILLFCDDNWGNVRKLP
DLRKPLHKGGYGMYYHFDYVGGPRNSKWINISPIQRVWEQMNLSYEHGVDKVWIVNVGDLKPMEFPISFFLDMAWNPKKF
NPQNLFEFTEKWAAEQFGEKHSKEIAGFLNTYPKFNRRVTPEMLDSQTYSLENYNEFQNVVNDYKNLALDAYRVYNDLPE
EYKDAYFQLVLYPIDACSNLYEMYFAQALNKKLYKQKDIQANYYADLVKTKFARDSVLQNKYNNEIANGKWPHMMDQMHI
GYKNWFDTPKNILPEIQYITASEKTERKVFVEKDGYVSIEVAHFSKVNDSKRIHWETIPDFGKTKSGITTLPQNLYPDTK
ENIFVEYEIDFTSTGTFNVELLLAPTLNFNSNKGLRYEVSFDDEKPQLVNFNGKYRGELGKWQAEHMIHSLTSHQILKPG
RHTLRFRVLDPGIVLQKILINTGGLKPSYLGAPESDRVSQD

Sequences:

>Translated_841_residues
MKSLSTWIALLIICIYSPLKAAEPFITHEKSSNVIVLKEKSVQPSFFINTTLDAGIMRAVYNLQSDFEKVTGSKPVILNQ
NPADSSPLIIIGMAGNSVIDDLIKQKKINGKDLKGKNEKFIIQHVKNPFKGVEEAIVIAGSDKRGTIYGIYELSRQIGVS
PWYYWADVPVKKSETLYFIKGTYSDGEPAVKYRGIFLNDEAPALSGWAKKTFGGFNSKFYEKVFELLLRLKSNYMWPAMW
GNAFYDDDPLSGPLANEMGIIMGTSHHEPMALAQTDWHRYIKKNNLPNVWDYSKNKTVLDEFWKSGIVRSKNWEKLVTIG
MRGDGDEAMSEGTNISLLENIVKEQRRIISQETGQSTDKTPQVWALYKEVQDYYDQGMRVPDDVILLFCDDNWGNVRKLP
DLRKPLHKGGYGMYYHFDYVGGPRNSKWINISPIQRVWEQMNLSYEHGVDKVWIVNVGDLKPMEFPISFFLDMAWNPKKF
NPQNLFEFTEKWAAEQFGEKHSKEIAGFLNTYPKFNRRVTPEMLDSQTYSLENYNEFQNVVNDYKNLALDAYRVYNDLPE
EYKDAYFQLVLYPIDACSNLYEMYFAQALNKKLYKQKDIQANYYADLVKTKFARDSVLQNKYNNEIANGKWPHMMDQMHI
GYKNWFDTPKNILPEIQYITASEKTERKVFVEKDGYVSIEVAHFSKVNDSKRIHWETIPDFGKTKSGITTLPQNLYPDTK
ENIFVEYEIDFTSTGTFNVELLLAPTLNFNSNKGLRYEVSFDDEKPQLVNFNGKYRGELGKWQAEHMIHSLTSHQILKPG
RHTLRFRVLDPGIVLQKILINTGGLKPSYLGAPESDRVSQD
>Mature_841_residues
MKSLSTWIALLIICIYSPLKAAEPFITHEKSSNVIVLKEKSVQPSFFINTTLDAGIMRAVYNLQSDFEKVTGSKPVILNQ
NPADSSPLIIIGMAGNSVIDDLIKQKKINGKDLKGKNEKFIIQHVKNPFKGVEEAIVIAGSDKRGTIYGIYELSRQIGVS
PWYYWADVPVKKSETLYFIKGTYSDGEPAVKYRGIFLNDEAPALSGWAKKTFGGFNSKFYEKVFELLLRLKSNYMWPAMW
GNAFYDDDPLSGPLANEMGIIMGTSHHEPMALAQTDWHRYIKKNNLPNVWDYSKNKTVLDEFWKSGIVRSKNWEKLVTIG
MRGDGDEAMSEGTNISLLENIVKEQRRIISQETGQSTDKTPQVWALYKEVQDYYDQGMRVPDDVILLFCDDNWGNVRKLP
DLRKPLHKGGYGMYYHFDYVGGPRNSKWINISPIQRVWEQMNLSYEHGVDKVWIVNVGDLKPMEFPISFFLDMAWNPKKF
NPQNLFEFTEKWAAEQFGEKHSKEIAGFLNTYPKFNRRVTPEMLDSQTYSLENYNEFQNVVNDYKNLALDAYRVYNDLPE
EYKDAYFQLVLYPIDACSNLYEMYFAQALNKKLYKQKDIQANYYADLVKTKFARDSVLQNKYNNEIANGKWPHMMDQMHI
GYKNWFDTPKNILPEIQYITASEKTERKVFVEKDGYVSIEVAHFSKVNDSKRIHWETIPDFGKTKSGITTLPQNLYPDTK
ENIFVEYEIDFTSTGTFNVELLLAPTLNFNSNKGLRYEVSFDDEKPQLVNFNGKYRGELGKWQAEHMIHSLTSHQILKPG
RHTLRFRVLDPGIVLQKILINTGGLKPSYLGAPESDRVSQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97044; Mature: 97044

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLSTWIALLIICIYSPLKAAEPFITHEKSSNVIVLKEKSVQPSFFINTTLDAGIMRAV
CCCHHHHHHHHHHHHHCCHHHCCCCEEECCCCCEEEEECCCCCCCEEEECCHHHHHHHHH
YNLQSDFEKVTGSKPVILNQNPADSSPLIIIGMAGNSVIDDLIKQKKINGKDLKGKNEKF
HHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHH
IIQHVKNPFKGVEEAIVIAGSDKRGTIYGIYELSRQIGVSPWYYWADVPVKKSETLYFIK
HHHHHCCHHCCCCEEEEEECCCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCCCEEEEEE
GTYSDGEPAVKYRGIFLNDEAPALSGWAKKTFGGFNSKFYEKVFELLLRLKSNYMWPAMW
EECCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
GNAFYDDDPLSGPLANEMGIIMGTSHHEPMALAQTDWHRYIKKNNLPNVWDYSKNKTVLD
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCHHHH
EFWKSGIVRSKNWEKLVTIGMRGDGDEAMSEGTNISLLENIVKEQRRIISQETGQSTDKT
HHHHCCCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PQVWALYKEVQDYYDQGMRVPDDVILLFCDDNWGNVRKLPDLRKPLHKGGYGMYYHFDYV
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEEEC
GGPRNSKWINISPIQRVWEQMNLSYEHGVDKVWIVNVGDLKPMEFPISFFLDMAWNPKKF
CCCCCCCEEECCHHHHHHHHHCCCHHCCCCEEEEEECCCCCCCCCCHHHHEECCCCCCCC
NPQNLFEFTEKWAAEQFGEKHSKEIAGFLNTYPKFNRRVTPEMLDSQTYSLENYNEFQNV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH
VNDYKNLALDAYRVYNDLPEEYKDAYFQLVLYPIDACSNLYEMYFAQALNKKLYKQKDIQ
HHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
ANYYADLVKTKFARDSVLQNKYNNEIANGKWPHMMDQMHIGYKNWFDTPKNILPEIQYIT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHCCCCHHHCCCEEEEE
ASEKTERKVFVEKDGYVSIEVAHFSKVNDSKRIHWETIPDFGKTKSGITTLPQNLYPDTK
CCCCCCCEEEEECCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCC
ENIFVEYEIDFTSTGTFNVELLLAPTLNFNSNKGLRYEVSFDDEKPQLVNFNGKYRGELG
CCEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCC
KWQAEHMIHSLTSHQILKPGRHTLRFRVLDPGIVLQKILINTGGLKPSYLGAPESDRVSQ
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
D
C
>Mature Secondary Structure
MKSLSTWIALLIICIYSPLKAAEPFITHEKSSNVIVLKEKSVQPSFFINTTLDAGIMRAV
CCCHHHHHHHHHHHHHCCHHHCCCCEEECCCCCEEEEECCCCCCCEEEECCHHHHHHHHH
YNLQSDFEKVTGSKPVILNQNPADSSPLIIIGMAGNSVIDDLIKQKKINGKDLKGKNEKF
HHHHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHH
IIQHVKNPFKGVEEAIVIAGSDKRGTIYGIYELSRQIGVSPWYYWADVPVKKSETLYFIK
HHHHHCCHHCCCCEEEEEECCCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCCCEEEEEE
GTYSDGEPAVKYRGIFLNDEAPALSGWAKKTFGGFNSKFYEKVFELLLRLKSNYMWPAMW
EECCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
GNAFYDDDPLSGPLANEMGIIMGTSHHEPMALAQTDWHRYIKKNNLPNVWDYSKNKTVLD
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCHHHH
EFWKSGIVRSKNWEKLVTIGMRGDGDEAMSEGTNISLLENIVKEQRRIISQETGQSTDKT
HHHHCCCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PQVWALYKEVQDYYDQGMRVPDDVILLFCDDNWGNVRKLPDLRKPLHKGGYGMYYHFDYV
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEEEEC
GGPRNSKWINISPIQRVWEQMNLSYEHGVDKVWIVNVGDLKPMEFPISFFLDMAWNPKKF
CCCCCCCEEECCHHHHHHHHHCCCHHCCCCEEEEEECCCCCCCCCCHHHHEECCCCCCCC
NPQNLFEFTEKWAAEQFGEKHSKEIAGFLNTYPKFNRRVTPEMLDSQTYSLENYNEFQNV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH
VNDYKNLALDAYRVYNDLPEEYKDAYFQLVLYPIDACSNLYEMYFAQALNKKLYKQKDIQ
HHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
ANYYADLVKTKFARDSVLQNKYNNEIANGKWPHMMDQMHIGYKNWFDTPKNILPEIQYIT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHCCCCHHHCCCEEEEE
ASEKTERKVFVEKDGYVSIEVAHFSKVNDSKRIHWETIPDFGKTKSGITTLPQNLYPDTK
CCCCCCCEEEEECCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCC
ENIFVEYEIDFTSTGTFNVELLLAPTLNFNSNKGLRYEVSFDDEKPQLVNFNGKYRGELG
CCEEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCC
KWQAEHMIHSLTSHQILKPGRHTLRFRVLDPGIVLQKILINTGGLKPSYLGAPESDRVSQ
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA