Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301537
Identifier: 146301537
GI number: 146301537
Start: 4501654
End: 4502229
Strand: Direct
Name: 146301537
Synonym: Fjoh_3798
Alternate gene names: NA
Gene position: 4501654-4502229 (Clockwise)
Preceding gene: 146301536
Following gene: 146301544
Centisome position: 73.84
GC content: 31.42
Gene sequence:
>576_bases ATGAATAAATTACCCTTTAATTATTTTACAAAATCCCTAATCGTTATAACGATCTTAGTAAATATAATGGCTCAAAATTT ACTGGCACAATCCAAAAATCCATCACCATTAAATTTTCCAACACCCAAGAATATAGATAACATGCTGTTTTACATTCAGC GAGATCCCAATACAAACACTGCTGTGTATGCCTTAAATTATCAGGAAAATGGGAAAATAAACAAAAGCAATCCTATAAAA GCCTACTGGATTCGATATGCTGAGAAAGGAGAACAAAAAAATTTCAGCTATATACAACGCAAATTTGCATATGGAATAGA AAGTAAAACCTTAAATAATGACGAGTTTGAGTTTCAATTTGTATCCTATAAAAAGTTTCCCCTAACCCTGGAGAAGATGG ATTCAGATCAAAAATATCATGTTTTTGTAAATGTAAATCAGAAAAGGATACAGGTAGAAAAAATATTTGTGCGTATTGAA GGGGGATCTTTTTGGTTACCAAACGTAAAGTATGCCGAAGTTACCGGAATTGATGCTTCCTCAAATCAAAAAATTACGGA AAGAATAGTATTTTAA
Upstream 100 bases:
>100_bases TTTCGTATGGATTTAATTACCCGCTGATTAAATATTGGGTTTTTAGGTTAAACAAAAAACAAAATGTCTTAAAATAAAAT TAAATCATAAGTATTTTGTT
Downstream 100 bases:
>100_bases ATCAGAGTTTTAATTTCCAAAAGCCTTTGCATAAATCTCTTATAGTTTTGCTGTATAAGATTTTAGGTAAATCTACTGAT TGCAAAGACAATTACTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MNKLPFNYFTKSLIVITILVNIMAQNLLAQSKNPSPLNFPTPKNIDNMLFYIQRDPNTNTAVYALNYQENGKINKSNPIK AYWIRYAEKGEQKNFSYIQRKFAYGIESKTLNNDEFEFQFVSYKKFPLTLEKMDSDQKYHVFVNVNQKRIQVEKIFVRIE GGSFWLPNVKYAEVTGIDASSNQKITERIVF
Sequences:
>Translated_191_residues MNKLPFNYFTKSLIVITILVNIMAQNLLAQSKNPSPLNFPTPKNIDNMLFYIQRDPNTNTAVYALNYQENGKINKSNPIK AYWIRYAEKGEQKNFSYIQRKFAYGIESKTLNNDEFEFQFVSYKKFPLTLEKMDSDQKYHVFVNVNQKRIQVEKIFVRIE GGSFWLPNVKYAEVTGIDASSNQKITERIVF >Mature_191_residues MNKLPFNYFTKSLIVITILVNIMAQNLLAQSKNPSPLNFPTPKNIDNMLFYIQRDPNTNTAVYALNYQENGKINKSNPIK AYWIRYAEKGEQKNFSYIQRKFAYGIESKTLNNDEFEFQFVSYKKFPLTLEKMDSDQKYHVFVNVNQKRIQVEKIFVRIE GGSFWLPNVKYAEVTGIDASSNQKITERIVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22392; Mature: 22392
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLPFNYFTKSLIVITILVNIMAQNLLAQSKNPSPLNFPTPKNIDNMLFYIQRDPNTNT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCE AVYALNYQENGKINKSNPIKAYWIRYAEKGEQKNFSYIQRKFAYGIESKTLNNDEFEFQF EEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE VSYKKFPLTLEKMDSDQKYHVFVNVNQKRIQVEKIFVRIEGGSFWLPNVKYAEVTGIDAS EEEEECCEEEECCCCCCEEEEEEECCHHEEEEEEEEEEECCCEEECCCCEEEEEECCCCC SNQKITERIVF CCCCHHHCCCC >Mature Secondary Structure MNKLPFNYFTKSLIVITILVNIMAQNLLAQSKNPSPLNFPTPKNIDNMLFYIQRDPNTNT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCE AVYALNYQENGKINKSNPIKAYWIRYAEKGEQKNFSYIQRKFAYGIESKTLNNDEFEFQF EEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE VSYKKFPLTLEKMDSDQKYHVFVNVNQKRIQVEKIFVRIEGGSFWLPNVKYAEVTGIDAS EEEEECCEEEECCCCCCEEEEEEECCHHEEEEEEEEEEECCCEEECCCCEEEEEECCCCC SNQKITERIVF CCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA