Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301544
Identifier: 146301544
GI number: 146301544
Start: 4512779
End: 4514626
Strand: Direct
Name: 146301544
Synonym: Fjoh_3805
Alternate gene names: NA
Gene position: 4512779-4514626 (Clockwise)
Preceding gene: 146301537
Following gene: 146301545
Centisome position: 74.02
GC content: 40.26
Gene sequence:
>1848_bases ATGAAATTTAAAACGAAATTAATTGTCTTTGTATCTGTATTGGTTCAACTTTCTGCAGTGCTGTCTGCACAATCAAAAAA ACAATCGGTCACAATCACTTCCCCAGATAAAAAACTTGTAGTTCAAATTGAACAAACCACTGCAAACACAATTGAATACA CTTTTCGGGCTGACGGTCATCTATTGATACAAAAATCTAGGCTTGGATTAGAAGCAGTAAACAATATTCGTTGGAATAAA GTGAGCACTTCATCGGTAAAAAGTGTTTGGAAGCCTATTTGGGGGAAAAGAAAAAATGTGCCTGATCATTACAACCAAAC CATAATAGATCTTACTTCCTATCAAATAAAAGTAAGAGTGTACAATGATGGAATGGCTTTCAGATATGAAGGTTTAACGT CGGAGAAAGAATTGACAGAATTTAACTTTGCAGATAACTATTCTGCTTGGTACTATAATGGCGAGCAGCACAATATTGGT CCTGAAAAACTGCACGAAGCAGCTGATACCCGAAAACCGATCATGGTTGTTAAAGCAGCTGAAAATAGTTACATGGCAGT GCACGAGGCCAATCTTGAAAGCGGTGAACCCCTACTTTTACAGCCGCATAAAGGAACGAATCTCTTCTCAGTGCCTTCTA AAAATGCAAAGGCATGGAGAGTTGTGATGCATGGAAGAACTCCGGGAGAATTAATTGATTCTCATCTGATTGAATTACTT AATCCTGAACCTGTAAAGAATGTAGATTTCTCATGGGTAAAACCGGGTGTCGCTGTGTGGGATTGGCGCATTGATGGCGC AGCAGTTGATGGATTCAAATATGAGATGTCATTGGAATCTTGGAAACGCATGGTCGATCTGGCATCTGCCAACGGAATGA AATCGCTGGTCTTGGATGCCAACTGGTACGGTGAAGAATTCAGCAAAGAATCAGATCCTTTAAAAGGAGGTAAAGTACAG CAGGTACATCAGATCATTGCTTACGGAAAAGAGAAAAATATAGGAATCTGGCTGTATCTTAATGATGTTGGAGGAAAAAA TTATCCTCTAGAAAAAACATTAAAGCAATATGGTGACTGGGGAGCTTCTGGTGTAAAATATGGTTTTATGCAGGGCAGTC CAGAGGAGAAAAACGCGCATACACAGCATATAACCAAACTTTGTGCTGAAAACCATTTAATGGTCGATTTTCATGATGAT CCAGTTCATCCCTACGGTCAGATGAGAACATGGCCAAACGCGGTTACCCGTGAGTTTTGCCAAGCACAATTGGATGCGCG CAGAGTTTTTGAACCCAAGACATTTGTTACCTCTGTATTTGTCAATATGGTGGCAGGACCTCTTGATATGAACAACGGGA CCTTTGATATGGAGCAAAAAGGACGAGTTGACAATCCAATGCCGGTACCTTCTACCCTTACAGCGGAAGCAGCCCGCACC CTGATCACATTTTCTGGCGCAACCATCATTCCTGATATTCCTGAGAACTATAATAAATATCCGGAATTATTACAGTTTAT CAGTGCTCAAAAACAGCCTTGGCAGGAAAGTAAAACAATCAGTGGTCAAATTGGAGAATATATTGTTATGGCACGTCAGA ATGCAGAAGGAGATTGGCTGATAGCTGCAGCGACAAATGAAGAAAGCCGTCAGATTCACATTCCGCTTAAAGTATTAGAA AAAGGCACTTACAAAGCGGTCATTGTTCAAGACGGAGACGATGCCGATTTCAGAACCAATAAAGTAAGCCATAAAACCAT TTCTAAAGAAGTGAACCGCAACGACCTTATTCCTATTAAACTTGCTCCAGGAGGAGGAGCTTGTATTTTATTACAAAAAG AAAAATAG
Upstream 100 bases:
>100_bases TAGTTTTGTTAGTAGCGTAAAAAAAATTAAAGTTTACGTAGTATCTGCTATCTACCCGAAATAAGACAGAATTCTTTTCC GGAATAATAAAAAGCAAAAA
Downstream 100 bases:
>100_bases TTGATTTTAAGGATAAGACTATCGAAGTTTTTTTTCAAGGGATTAAGTTTTGACACCGTTTTATTTACTAAAAACGATAG TGATTTACTGGCTGATTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Esterase; Alpha-Glucosidase-Like Protein; Glycosyl Hydrolase Family; Alpha-Glucosidase SusB; Secreted Protein
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MKFKTKLIVFVSVLVQLSAVLSAQSKKQSVTITSPDKKLVVQIEQTTANTIEYTFRADGHLLIQKSRLGLEAVNNIRWNK VSTSSVKSVWKPIWGKRKNVPDHYNQTIIDLTSYQIKVRVYNDGMAFRYEGLTSEKELTEFNFADNYSAWYYNGEQHNIG PEKLHEAADTRKPIMVVKAAENSYMAVHEANLESGEPLLLQPHKGTNLFSVPSKNAKAWRVVMHGRTPGELIDSHLIELL NPEPVKNVDFSWVKPGVAVWDWRIDGAAVDGFKYEMSLESWKRMVDLASANGMKSLVLDANWYGEEFSKESDPLKGGKVQ QVHQIIAYGKEKNIGIWLYLNDVGGKNYPLEKTLKQYGDWGASGVKYGFMQGSPEEKNAHTQHITKLCAENHLMVDFHDD PVHPYGQMRTWPNAVTREFCQAQLDARRVFEPKTFVTSVFVNMVAGPLDMNNGTFDMEQKGRVDNPMPVPSTLTAEAART LITFSGATIIPDIPENYNKYPELLQFISAQKQPWQESKTISGQIGEYIVMARQNAEGDWLIAAATNEESRQIHIPLKVLE KGTYKAVIVQDGDDADFRTNKVSHKTISKEVNRNDLIPIKLAPGGGACILLQKEK
Sequences:
>Translated_615_residues MKFKTKLIVFVSVLVQLSAVLSAQSKKQSVTITSPDKKLVVQIEQTTANTIEYTFRADGHLLIQKSRLGLEAVNNIRWNK VSTSSVKSVWKPIWGKRKNVPDHYNQTIIDLTSYQIKVRVYNDGMAFRYEGLTSEKELTEFNFADNYSAWYYNGEQHNIG PEKLHEAADTRKPIMVVKAAENSYMAVHEANLESGEPLLLQPHKGTNLFSVPSKNAKAWRVVMHGRTPGELIDSHLIELL NPEPVKNVDFSWVKPGVAVWDWRIDGAAVDGFKYEMSLESWKRMVDLASANGMKSLVLDANWYGEEFSKESDPLKGGKVQ QVHQIIAYGKEKNIGIWLYLNDVGGKNYPLEKTLKQYGDWGASGVKYGFMQGSPEEKNAHTQHITKLCAENHLMVDFHDD PVHPYGQMRTWPNAVTREFCQAQLDARRVFEPKTFVTSVFVNMVAGPLDMNNGTFDMEQKGRVDNPMPVPSTLTAEAART LITFSGATIIPDIPENYNKYPELLQFISAQKQPWQESKTISGQIGEYIVMARQNAEGDWLIAAATNEESRQIHIPLKVLE KGTYKAVIVQDGDDADFRTNKVSHKTISKEVNRNDLIPIKLAPGGGACILLQKEK >Mature_615_residues MKFKTKLIVFVSVLVQLSAVLSAQSKKQSVTITSPDKKLVVQIEQTTANTIEYTFRADGHLLIQKSRLGLEAVNNIRWNK VSTSSVKSVWKPIWGKRKNVPDHYNQTIIDLTSYQIKVRVYNDGMAFRYEGLTSEKELTEFNFADNYSAWYYNGEQHNIG PEKLHEAADTRKPIMVVKAAENSYMAVHEANLESGEPLLLQPHKGTNLFSVPSKNAKAWRVVMHGRTPGELIDSHLIELL NPEPVKNVDFSWVKPGVAVWDWRIDGAAVDGFKYEMSLESWKRMVDLASANGMKSLVLDANWYGEEFSKESDPLKGGKVQ QVHQIIAYGKEKNIGIWLYLNDVGGKNYPLEKTLKQYGDWGASGVKYGFMQGSPEEKNAHTQHITKLCAENHLMVDFHDD PVHPYGQMRTWPNAVTREFCQAQLDARRVFEPKTFVTSVFVNMVAGPLDMNNGTFDMEQKGRVDNPMPVPSTLTAEAART LITFSGATIIPDIPENYNKYPELLQFISAQKQPWQESKTISGQIGEYIVMARQNAEGDWLIAAATNEESRQIHIPLKVLE KGTYKAVIVQDGDDADFRTNKVSHKTISKEVNRNDLIPIKLAPGGGACILLQKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69305; Mature: 69305
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKTKLIVFVSVLVQLSAVLSAQSKKQSVTITSPDKKLVVQIEQTTANTIEYTFRADGH CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCE LLIQKSRLGLEAVNNIRWNKVSTSSVKSVWKPIWGKRKNVPDHYNQTIIDLTSYQIKVRV EEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCEEEEEEEEEEEEEE YNDGMAFRYEGLTSEKELTEFNFADNYSAWYYNGEQHNIGPEKLHEAADTRKPIMVVKAA EECCEEEEECCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEC ENSYMAVHEANLESGEPLLLQPHKGTNLFSVPSKNAKAWRVVMHGRTPGELIDSHLIELL CCCEEEEEECCCCCCCEEEEECCCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHC NPEPVKNVDFSWVKPGVAVWDWRIDGAAVDGFKYEMSLESWKRMVDLASANGMKSLVLDA CCCCCCCCCCCEECCCEEEEEEEECCEEECCEEEEECHHHHHHHHHHHCCCCCEEEEEEC NWYGEEFSKESDPLKGGKVQQVHQIIAYGKEKNIGIWLYLNDVGGKNYPLEKTLKQYGDW CCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCC GASGVKYGFMQGSPEEKNAHTQHITKLCAENHLMVDFHDDPVHPYGQMRTWPNAVTREFC CCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH QAQLDARRVFEPKTFVTSVFVNMVAGPLDMNNGTFDMEQKGRVDNPMPVPSTLTAEAART HHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCCEECCCCCCCCCCCCCCCCCHHHHHHHE LITFSGATIIPDIPENYNKYPELLQFISAQKQPWQESKTISGQIGEYIVMARQNAEGDWL EEEECCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEE IAAATNEESRQIHIPLKVLEKGTYKAVIVQDGDDADFRTNKVSHKTISKEVNRNDLIPIK EEEECCCCCCEEEEEHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEE LAPGGGACILLQKEK ECCCCCEEEEEECCC >Mature Secondary Structure MKFKTKLIVFVSVLVQLSAVLSAQSKKQSVTITSPDKKLVVQIEQTTANTIEYTFRADGH CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCE LLIQKSRLGLEAVNNIRWNKVSTSSVKSVWKPIWGKRKNVPDHYNQTIIDLTSYQIKVRV EEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCEEEEEEEEEEEEEE YNDGMAFRYEGLTSEKELTEFNFADNYSAWYYNGEQHNIGPEKLHEAADTRKPIMVVKAA EECCEEEEECCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEC ENSYMAVHEANLESGEPLLLQPHKGTNLFSVPSKNAKAWRVVMHGRTPGELIDSHLIELL CCCEEEEEECCCCCCCEEEEECCCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHC NPEPVKNVDFSWVKPGVAVWDWRIDGAAVDGFKYEMSLESWKRMVDLASANGMKSLVLDA CCCCCCCCCCCEECCCEEEEEEEECCEEECCEEEEECHHHHHHHHHHHCCCCCEEEEEEC NWYGEEFSKESDPLKGGKVQQVHQIIAYGKEKNIGIWLYLNDVGGKNYPLEKTLKQYGDW CCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCC GASGVKYGFMQGSPEEKNAHTQHITKLCAENHLMVDFHDDPVHPYGQMRTWPNAVTREFC CCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH QAQLDARRVFEPKTFVTSVFVNMVAGPLDMNNGTFDMEQKGRVDNPMPVPSTLTAEAART HHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCCEECCCCCCCCCCCCCCCCCHHHHHHHE LITFSGATIIPDIPENYNKYPELLQFISAQKQPWQESKTISGQIGEYIVMARQNAEGDWL EEEECCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEE IAAATNEESRQIHIPLKVLEKGTYKAVIVQDGDDADFRTNKVSHKTISKEVNRNDLIPIK EEEECCCCCCEEEEEHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEE LAPGGGACILLQKEK ECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA