Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301536
Identifier: 146301536
GI number: 146301536
Start: 4501205
End: 4501630
Strand: Direct
Name: 146301536
Synonym: Fjoh_3797
Alternate gene names: NA
Gene position: 4501205-4501630 (Clockwise)
Preceding gene: 146301535
Following gene: 146301537
Centisome position: 73.83
GC content: 30.75
Gene sequence:
>426_bases ATGTTCAGAAAAAAAGCTGTTTTAACTTTTCTGCAGGCACAAGTTGCGGCATTTTTAGGCGGTATTACCGATTATACCTT AATGATTCTATTAACAGAAGTATTTAAGCTGCATTTTACCTTTTCTATTTTAATCTCAGGAACTGTTGGTGCAATCATCA ATTTCAGCATCAATAGATTTTGGGTATTTAAAGATCAATGTGGGTATAGCTGCCACATCAATAGTCAGCTTTTTAAATTT GCGGTAGTTGTACTAGGAAGTATTTCATTAAAATCATTTGGCACACTAATTTTACAAAAAACATTTCAAATCGATTACAG AATCGGAAGATTAATCACAGATAGTTTTGTTTCGTATGGATTTAATTACCCGCTGATTAAATATTGGGTTTTTAGGTTAA ACAAAAAACAAAATGTCTTAAAATAA
Upstream 100 bases:
>100_bases TTGGCAGGCTTAATCACTATTGCATTATTTATAATTAATACGATAGACAGCATGAAACTCTTAAAGCTGGGCGATTTAAA AGATAAAAAAACAGACTGAA
Downstream 100 bases:
>100_bases AATTAAATCATAAGTATTTTGTTATGAATAAATTACCCTTTAATTATTTTACAAAATCCCTAATCGTTATAACGATCTTA GTAAATATAATGGCTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MFRKKAVLTFLQAQVAAFLGGITDYTLMILLTEVFKLHFTFSILISGTVGAIINFSINRFWVFKDQCGYSCHINSQLFKF AVVVLGSISLKSFGTLILQKTFQIDYRIGRLITDSFVSYGFNYPLIKYWVFRLNKKQNVLK
Sequences:
>Translated_141_residues MFRKKAVLTFLQAQVAAFLGGITDYTLMILLTEVFKLHFTFSILISGTVGAIINFSINRFWVFKDQCGYSCHINSQLFKF AVVVLGSISLKSFGTLILQKTFQIDYRIGRLITDSFVSYGFNYPLIKYWVFRLNKKQNVLK >Mature_141_residues MFRKKAVLTFLQAQVAAFLGGITDYTLMILLTEVFKLHFTFSILISGTVGAIINFSINRFWVFKDQCGYSCHINSQLFKF AVVVLGSISLKSFGTLILQKTFQIDYRIGRLITDSFVSYGFNYPLIKYWVFRLNKKQNVLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16246; Mature: 16246
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRKKAVLTFLQAQVAAFLGGITDYTLMILLTEVFKLHFTFSILISGTVGAIINFSINRF CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHEEEEECCEE WVFKDQCGYSCHINSQLFKFAVVVLGSISLKSFGTLILQKTFQIDYRIGRLITDSFVSYG EEEECCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FNYPLIKYWVFRLNKKQNVLK CCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFRKKAVLTFLQAQVAAFLGGITDYTLMILLTEVFKLHFTFSILISGTVGAIINFSINRF CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHEEEEECCEE WVFKDQCGYSCHINSQLFKFAVVVLGSISLKSFGTLILQKTFQIDYRIGRLITDSFVSYG EEEECCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FNYPLIKYWVFRLNKKQNVLK CCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA