Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301535
Identifier: 146301535
GI number: 146301535
Start: 4500517
End: 4501203
Strand: Direct
Name: 146301535
Synonym: Fjoh_3796
Alternate gene names: NA
Gene position: 4500517-4501203 (Clockwise)
Preceding gene: 146301534
Following gene: 146301536
Centisome position: 73.82
GC content: 34.64
Gene sequence:
>687_bases ATGGGAAAAGAAATACAGGTTGAGGATTATAATGCAATTGCGCAAAGAACATTTTCAGACCGCAAGCGGACTAATATTTT AAAAAGAGCAGAACAGTTAACGATTGTATTTTTGCTTCCAAAAGTGCCTAAATTCATTTCGCCAAACCTGCTTACTTTAA TGGGAACTCTTGGTTCAGGATTCGTATTTTTAGCTTTTGTTTTAGGAACTTATTTGGTTGATTGGTATTTGCTTTTGGGT ATTATTGGATTGGCTGTAAATTGGTTAGGCGATTCTTTAGATGGAAGATTGGCTTATTATAGAAATACCCCGCGCCGCTG GTATGGTTTTGCACTCGATATTATCGCCGACTGGATTGGTATTGTACTTATAGGCTTTGGCTACTACATTTATGCTAAAA ATGGCACACAAGTATTAGCCTTTGCTTTTGTTGCATTGTATGGCTGGTCGATCATCATCAGTCAGTTACGGTATAAAATT ACAAATGAATATAGTATTGATTCCGGCTTTGTTGGTCCAACAGAACTTCGATTTATTATTGCTTTAATTTTAATTATAGA AGTTTTATTTACTGGATCAATTACCTATTTGGCAGGCTTAATCACTATTGCATTATTTATAATTAATACGATAGACAGCA TGAAACTCTTAAAGCTGGGCGATTTAAAAGATAAAAAAACAGACTGA
Upstream 100 bases:
>100_bases GTACCACCGATTTTTTTAAAAGCAAGCAAAGAAAAATCAAATTGAAAATGGCAAAAATAGAATTGGCTATACTGTCAGGT TTACAAATATTGGGCTGATA
Downstream 100 bases:
>100_bases AATGTTCAGAAAAAAAGCTGTTTTAACTTTTCTGCAGGCACAAGTTGCGGCATTTTTAGGCGGTATTACCGATTATACCT TAATGATTCTATTAACAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: PgsA-Like Protein
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MGKEIQVEDYNAIAQRTFSDRKRTNILKRAEQLTIVFLLPKVPKFISPNLLTLMGTLGSGFVFLAFVLGTYLVDWYLLLG IIGLAVNWLGDSLDGRLAYYRNTPRRWYGFALDIIADWIGIVLIGFGYYIYAKNGTQVLAFAFVALYGWSIIISQLRYKI TNEYSIDSGFVGPTELRFIIALILIIEVLFTGSITYLAGLITIALFIINTIDSMKLLKLGDLKDKKTD
Sequences:
>Translated_228_residues MGKEIQVEDYNAIAQRTFSDRKRTNILKRAEQLTIVFLLPKVPKFISPNLLTLMGTLGSGFVFLAFVLGTYLVDWYLLLG IIGLAVNWLGDSLDGRLAYYRNTPRRWYGFALDIIADWIGIVLIGFGYYIYAKNGTQVLAFAFVALYGWSIIISQLRYKI TNEYSIDSGFVGPTELRFIIALILIIEVLFTGSITYLAGLITIALFIINTIDSMKLLKLGDLKDKKTD >Mature_227_residues GKEIQVEDYNAIAQRTFSDRKRTNILKRAEQLTIVFLLPKVPKFISPNLLTLMGTLGSGFVFLAFVLGTYLVDWYLLLGI IGLAVNWLGDSLDGRLAYYRNTPRRWYGFALDIIADWIGIVLIGFGYYIYAKNGTQVLAFAFVALYGWSIIISQLRYKIT NEYSIDSGFVGPTELRFIIALILIIEVLFTGSITYLAGLITIALFIINTIDSMKLLKLGDLKDKKTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25733; Mature: 25602
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKEIQVEDYNAIAQRTFSDRKRTNILKRAEQLTIVFLLPKVPKFISPNLLTLMGTLGSG CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHCCHHHHHHHHHCCH FVFLAFVLGTYLVDWYLLLGIIGLAVNWLGDSLDGRLAYYRNTPRRWYGFALDIIADWIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH IVLIGFGYYIYAKNGTQVLAFAFVALYGWSIIISQLRYKITNEYSIDSGFVGPTELRFII HHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ALILIIEVLFTGSITYLAGLITIALFIINTIDSMKLLKLGDLKDKKTD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GKEIQVEDYNAIAQRTFSDRKRTNILKRAEQLTIVFLLPKVPKFISPNLLTLMGTLGSG CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHCCHHHHHHHHHCCH FVFLAFVLGTYLVDWYLLLGIIGLAVNWLGDSLDGRLAYYRNTPRRWYGFALDIIADWIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH IVLIGFGYYIYAKNGTQVLAFAFVALYGWSIIISQLRYKITNEYSIDSGFVGPTELRFII HHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ALILIIEVLFTGSITYLAGLITIALFIINTIDSMKLLKLGDLKDKKTD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA