Click here to switch to the map view.

The map label for this gene is 146301534

Identifier: 146301534

GI number: 146301534

Start: 4499556

End: 4500362

Strand: Direct

Name: 146301534

Synonym: Fjoh_3795

Alternate gene names: NA

Gene position: 4499556-4500362 (Clockwise)

Preceding gene: 146301533

Following gene: 146301535

Centisome position: 73.8

GC content: 37.67

Gene sequence:

>807_bases
ATGGTATCTTCTTATAAAACCTTCACCCTTGCTGAGCAATTAAATAATGAGCAAATAAACTTTTTTAACGAACATGGCTT
TATCCATTTCAAAAAATTTATAAATCCGGAAACTGTTTCATCCATCATTGAAGCCTCGAAACAAGTAGAGCAACAATGGA
TTGACAATGATCTTCAAAAAGTAAACGGTGTTCCTATTAAATACGGAAAGGATTTAGACGGCTCTCCTATTGTGCAGCGC
TTTGCTTTTATCAACCAGCATCATCAGACCTTAAGCGGTCTTTTACTCGATCCAAGATTCAATGGTTTACTGCCATTGGC
CGGCGATGGCGCAAGATTAGGTACTGAAGAAAAAGACGGAATGGTTTTCAATCACTATATCAACGGGCCGGAAAGTAAGT
TTACAAAAATGGGCTGGCACACAGATGGCTTAAGAGATATTTTTTATGGTGGAAAATTAAACCCGATGCTAAATGTGGGT
ATTCACTTAAGTACTTTAAAACCTGAAAATGGCGGTCTTAAAATCATCCCGGGTACACATAAGCAAAGTATTTATCAAAT
GCTTTTCCGTAAAAAATACTTTTTAGATCATCAACCTGATCCACAAGAAGTTTCCATCAATCCCGAAGCTGGAGATTTAA
CTATTCACGATGGACGTTTGTGGCACAGAGTTGCACAATCATCTATCCGTGGCGAAGAAAGCAGAAGAAGAGTTATTTAT
ATTCCGATTATCGCAGGGAAATATGCTCCTAAAAACGAGAATAGTCCAACGGTTTTCTATCAGCGTTTTGCAGGAATTGT
TAAATAA

Upstream 100 bases:

>100_bases
TGCACGCCAACATGCTAATGTCTTGTTGCTGCTGTTGTTGTTATTCTGTTTTAGATAAAATTACAAACTATATTATTTCA
TTTATTAAATCTATATTATC

Downstream 100 bases:

>100_bases
TTATGCTGATTGTTCTCGCATTTAGTTATCTGGTTAGATCAGGTAAACTAAAAAGTACCACCGATTTTTTTAAAAGCAAG
CAAAGAAAAATCAAATTGAA

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MVSSYKTFTLAEQLNNEQINFFNEHGFIHFKKFINPETVSSIIEASKQVEQQWIDNDLQKVNGVPIKYGKDLDGSPIVQR
FAFINQHHQTLSGLLLDPRFNGLLPLAGDGARLGTEEKDGMVFNHYINGPESKFTKMGWHTDGLRDIFYGGKLNPMLNVG
IHLSTLKPENGGLKIIPGTHKQSIYQMLFRKKYFLDHQPDPQEVSINPEAGDLTIHDGRLWHRVAQSSIRGEESRRRVIY
IPIIAGKYAPKNENSPTVFYQRFAGIVK

Sequences:

>Translated_268_residues
MVSSYKTFTLAEQLNNEQINFFNEHGFIHFKKFINPETVSSIIEASKQVEQQWIDNDLQKVNGVPIKYGKDLDGSPIVQR
FAFINQHHQTLSGLLLDPRFNGLLPLAGDGARLGTEEKDGMVFNHYINGPESKFTKMGWHTDGLRDIFYGGKLNPMLNVG
IHLSTLKPENGGLKIIPGTHKQSIYQMLFRKKYFLDHQPDPQEVSINPEAGDLTIHDGRLWHRVAQSSIRGEESRRRVIY
IPIIAGKYAPKNENSPTVFYQRFAGIVK
>Mature_268_residues
MVSSYKTFTLAEQLNNEQINFFNEHGFIHFKKFINPETVSSIIEASKQVEQQWIDNDLQKVNGVPIKYGKDLDGSPIVQR
FAFINQHHQTLSGLLLDPRFNGLLPLAGDGARLGTEEKDGMVFNHYINGPESKFTKMGWHTDGLRDIFYGGKLNPMLNVG
IHLSTLKPENGGLKIIPGTHKQSIYQMLFRKKYFLDHQPDPQEVSINPEAGDLTIHDGRLWHRVAQSSIRGEESRRRVIY
IPIIAGKYAPKNENSPTVFYQRFAGIVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30505; Mature: 30505

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSYKTFTLAEQLNNEQINFFNEHGFIHFKKFINPETVSSIIEASKQVEQQWIDNDLQK
CCCCCHHHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
VNGVPIKYGKDLDGSPIVQRFAFINQHHQTLSGLLLDPRFNGLLPLAGDGARLGTEEKDG
HCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCCEEEECCCCCCCCCCCCCC
MVFNHYINGPESKFTKMGWHTDGLRDIFYGGKLNPMLNVGIHLSTLKPENGGLKIIPGTH
EEEEEECCCCHHHHHCCCCCCCCHHHHHCCCCCCCEEEEEEEEEEECCCCCCEEEECCCH
KQSIYQMLFRKKYFLDHQPDPQEVSINPEAGDLTIHDGRLWHRVAQSSIRGEESRRRVIY
HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHCCCCCCCEEEE
IPIIAGKYAPKNENSPTVFYQRFAGIVK
EEEEECCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MVSSYKTFTLAEQLNNEQINFFNEHGFIHFKKFINPETVSSIIEASKQVEQQWIDNDLQK
CCCCCHHHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
VNGVPIKYGKDLDGSPIVQRFAFINQHHQTLSGLLLDPRFNGLLPLAGDGARLGTEEKDG
HCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCEEECCCCCCEEEECCCCCCCCCCCCCC
MVFNHYINGPESKFTKMGWHTDGLRDIFYGGKLNPMLNVGIHLSTLKPENGGLKIIPGTH
EEEEEECCCCHHHHHCCCCCCCCHHHHHCCCCCCCEEEEEEEEEEECCCCCCEEEECCCH
KQSIYQMLFRKKYFLDHQPDPQEVSINPEAGDLTIHDGRLWHRVAQSSIRGEESRRRVIY
HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHCCCCCCCEEEE
IPIIAGKYAPKNENSPTVFYQRFAGIVK
EEEEECCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA