Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is ydfG [H]
Identifier: 146301475
GI number: 146301475
Start: 4431715
End: 4432167
Strand: Direct
Name: ydfG [H]
Synonym: Fjoh_3734
Alternate gene names: 146301475
Gene position: 4431715-4432167 (Clockwise)
Preceding gene: 146301474
Following gene: 146301480
Centisome position: 72.69
GC content: 45.92
Gene sequence:
>453_bases ATGCAAAAACGACTAAACATCAAACAGGCCGCCCCTGATGCACTGAAAGCGATGATCGGCCTTGAAAGCTATCTTTCAAA GATTTCCATCTCCAAGACAGCCAAAGAACTCATAAAGATCCGCGCCTCGCAGATCAACGGCTGCGCCTACTGCATCAACA TCCATACCCAGGACGCGGTTAAAAACGGCGAGACAAACCAGCGCATTTTTCTTCTGAGCGCCTGGAGGGAAGCGGGGGAT ATTTTTACAGAAGAAGAAAAAGCAGTGCTGGCGATAACGGAAGAAATAACATTAATACATCAACAGGGATTATCAGACCA GACCTATTCAAGCGCCGTGCATTTTTTCAGCGAAAAACAGATTGCAGATATCATAACTGCCGTAATTACCATCAATCTTT GGAACAGGGTTGTACTGAGCACCCGACTGCCTATAGGACAAAGTCTGGCATAA
Upstream 100 bases:
>100_bases TGAGCGAGATCCGAAGAAGGCTTCTTTCTTAAACTGGTTTAAGTTTTTTCATTTTCTTATCCTGCAATTTTGCATTGAAG AATTTTAAAAGAACAATACC
Downstream 100 bases:
>100_bases AACTGCAAGCTAATGCGGGCTTAAAAAGACTCCATACAAAACCTTAGAATTATAATCAGGTCTGATAATAATGAGCCCGT TTGTTTCGGGCTCATTTCTT
Product: alkylhydroperoxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MQKRLNIKQAAPDALKAMIGLESYLSKISISKTAKELIKIRASQINGCAYCINIHTQDAVKNGETNQRIFLLSAWREAGD IFTEEEKAVLAITEEITLIHQQGLSDQTYSSAVHFFSEKQIADIITAVITINLWNRVVLSTRLPIGQSLA
Sequences:
>Translated_150_residues MQKRLNIKQAAPDALKAMIGLESYLSKISISKTAKELIKIRASQINGCAYCINIHTQDAVKNGETNQRIFLLSAWREAGD IFTEEEKAVLAITEEITLIHQQGLSDQTYSSAVHFFSEKQIADIITAVITINLWNRVVLSTRLPIGQSLA >Mature_150_residues MQKRLNIKQAAPDALKAMIGLESYLSKISISKTAKELIKIRASQINGCAYCINIHTQDAVKNGETNQRIFLLSAWREAGD IFTEEEKAVLAITEEITLIHQQGLSDQTYSSAVHFFSEKQIADIITAVITINLWNRVVLSTRLPIGQSLA
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004675 - InterPro: IPR003779 [H]
Pfam domain/function: PF02627 CMD [H]
EC number: NA
Molecular weight: Translated: 16686; Mature: 16686
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRLNIKQAAPDALKAMIGLESYLSKISISKTAKELIKIRASQINGCAYCINIHTQDAV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHH KNGETNQRIFLLSAWREAGDIFTEEEKAVLAITEEITLIHQQGLSDQTYSSAVHFFSEKQ CCCCCCCEEEEEECCHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHH IADIITAVITINLWNRVVLSTRLPIGQSLA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQKRLNIKQAAPDALKAMIGLESYLSKISISKTAKELIKIRASQINGCAYCINIHTQDAV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHH KNGETNQRIFLLSAWREAGDIFTEEEKAVLAITEEITLIHQQGLSDQTYSSAVHFFSEKQ CCCCCCCEEEEEECCHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHH IADIITAVITINLWNRVVLSTRLPIGQSLA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]