Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301474
Identifier: 146301474
GI number: 146301474
Start: 4431005
End: 4431646
Strand: Direct
Name: 146301474
Synonym: Fjoh_3733
Alternate gene names: NA
Gene position: 4431005-4431646 (Clockwise)
Preceding gene: 146301466
Following gene: 146301475
Centisome position: 72.68
GC content: 46.88
Gene sequence:
>642_bases ATGCAACAGCGCCGTTCGGATTATAGAAGCAGGCCAAGAGTCAAAACCAATAAGCCATTAACTCCAATGCATGATATATT CAAAAACCATATAGCCAAGTTCGCACAGGTCACTGACGATGAATTCGAGCAGATCATCAAATTCTTCGACATCAAGAAAG CGGCCAAAAAAGAAAACCTGCTAGAAGAGGGACAGATCTGCCGGCACCATTACTTTGTTTTGGAGGGGCTGCTCAGAAAA TTCTACATCAACGAGAAAGGCACCGAGCAGACCACTGAATTTGCGATAGAAACCTGGTGGCTAACCGATAACTTTGCCTA CGAGAACCAGCTCGCGACAGAGTTTTATATTCAGGCAGTGGAAAAATCCACACTGCTCTGCATCACTCCCGAGAAGCGGC AGAAGCTGCTGGAGGAGTTTCCGGTGATGGAGCGCTATTTCCGTTTTGTCTACCAGCGGGCTTATGCTGCGGCCCAGAAA CGCATCAAATTCCTTTTCTCGTTCTCAAAAGAAGAATTTTATTTTCAGGCAGTCCGCAACCACCCTGAATTCATCCAGCG TGTTCCCCAGTACCTGATCGCTTCCTATCTGGGATTCACCCCCGAATATTTGAGCGAGATCCGAAGAAGGCTTCTTTCTT AA
Upstream 100 bases:
>100_bases CCAGCCCGGGCAGACATCGGATCTTCATGGAGAAAAGACCTAGGCATATTATTGCTATATTTGCCTAAAAAGCCTGCAGG CTGCACCAAGACCAAAAAGG
Downstream 100 bases:
>100_bases ACTGGTTTAAGTTTTTTCATTTTCTTATCCTGCAATTTTGCATTGAAGAATTTTAAAAGAACAATACCATGCAAAAACGA CTAAACATCAAACAGGCCGC
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MQQRRSDYRSRPRVKTNKPLTPMHDIFKNHIAKFAQVTDDEFEQIIKFFDIKKAAKKENLLEEGQICRHHYFVLEGLLRK FYINEKGTEQTTEFAIETWWLTDNFAYENQLATEFYIQAVEKSTLLCITPEKRQKLLEEFPVMERYFRFVYQRAYAAAQK RIKFLFSFSKEEFYFQAVRNHPEFIQRVPQYLIASYLGFTPEYLSEIRRRLLS
Sequences:
>Translated_213_residues MQQRRSDYRSRPRVKTNKPLTPMHDIFKNHIAKFAQVTDDEFEQIIKFFDIKKAAKKENLLEEGQICRHHYFVLEGLLRK FYINEKGTEQTTEFAIETWWLTDNFAYENQLATEFYIQAVEKSTLLCITPEKRQKLLEEFPVMERYFRFVYQRAYAAAQK RIKFLFSFSKEEFYFQAVRNHPEFIQRVPQYLIASYLGFTPEYLSEIRRRLLS >Mature_213_residues MQQRRSDYRSRPRVKTNKPLTPMHDIFKNHIAKFAQVTDDEFEQIIKFFDIKKAAKKENLLEEGQICRHHYFVLEGLLRK FYINEKGTEQTTEFAIETWWLTDNFAYENQLATEFYIQAVEKSTLLCITPEKRQKLLEEFPVMERYFRFVYQRAYAAAQK RIKFLFSFSKEEFYFQAVRNHPEFIQRVPQYLIASYLGFTPEYLSEIRRRLLS
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25860; Mature: 25860
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQRRSDYRSRPRVKTNKPLTPMHDIFKNHIAKFAQVTDDEFEQIIKFFDIKKAAKKENL CCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LEEGQICRHHYFVLEGLLRKFYINEKGTEQTTEFAIETWWLTDNFAYENQLATEFYIQAV HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH EKSTLLCITPEKRQKLLEEFPVMERYFRFVYQRAYAAAQKRIKFLFSFSKEEFYFQAVRN HCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPEFIQRVPQYLIASYLGFTPEYLSEIRRRLLS CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MQQRRSDYRSRPRVKTNKPLTPMHDIFKNHIAKFAQVTDDEFEQIIKFFDIKKAAKKENL CCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LEEGQICRHHYFVLEGLLRKFYINEKGTEQTTEFAIETWWLTDNFAYENQLATEFYIQAV HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH EKSTLLCITPEKRQKLLEEFPVMERYFRFVYQRAYAAAQKRIKFLFSFSKEEFYFQAVRN HCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPEFIQRVPQYLIASYLGFTPEYLSEIRRRLLS CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA