Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301474

Identifier: 146301474

GI number: 146301474

Start: 4431005

End: 4431646

Strand: Direct

Name: 146301474

Synonym: Fjoh_3733

Alternate gene names: NA

Gene position: 4431005-4431646 (Clockwise)

Preceding gene: 146301466

Following gene: 146301475

Centisome position: 72.68

GC content: 46.88

Gene sequence:

>642_bases
ATGCAACAGCGCCGTTCGGATTATAGAAGCAGGCCAAGAGTCAAAACCAATAAGCCATTAACTCCAATGCATGATATATT
CAAAAACCATATAGCCAAGTTCGCACAGGTCACTGACGATGAATTCGAGCAGATCATCAAATTCTTCGACATCAAGAAAG
CGGCCAAAAAAGAAAACCTGCTAGAAGAGGGACAGATCTGCCGGCACCATTACTTTGTTTTGGAGGGGCTGCTCAGAAAA
TTCTACATCAACGAGAAAGGCACCGAGCAGACCACTGAATTTGCGATAGAAACCTGGTGGCTAACCGATAACTTTGCCTA
CGAGAACCAGCTCGCGACAGAGTTTTATATTCAGGCAGTGGAAAAATCCACACTGCTCTGCATCACTCCCGAGAAGCGGC
AGAAGCTGCTGGAGGAGTTTCCGGTGATGGAGCGCTATTTCCGTTTTGTCTACCAGCGGGCTTATGCTGCGGCCCAGAAA
CGCATCAAATTCCTTTTCTCGTTCTCAAAAGAAGAATTTTATTTTCAGGCAGTCCGCAACCACCCTGAATTCATCCAGCG
TGTTCCCCAGTACCTGATCGCTTCCTATCTGGGATTCACCCCCGAATATTTGAGCGAGATCCGAAGAAGGCTTCTTTCTT
AA

Upstream 100 bases:

>100_bases
CCAGCCCGGGCAGACATCGGATCTTCATGGAGAAAAGACCTAGGCATATTATTGCTATATTTGCCTAAAAAGCCTGCAGG
CTGCACCAAGACCAAAAAGG

Downstream 100 bases:

>100_bases
ACTGGTTTAAGTTTTTTCATTTTCTTATCCTGCAATTTTGCATTGAAGAATTTTAAAAGAACAATACCATGCAAAAACGA
CTAAACATCAAACAGGCCGC

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MQQRRSDYRSRPRVKTNKPLTPMHDIFKNHIAKFAQVTDDEFEQIIKFFDIKKAAKKENLLEEGQICRHHYFVLEGLLRK
FYINEKGTEQTTEFAIETWWLTDNFAYENQLATEFYIQAVEKSTLLCITPEKRQKLLEEFPVMERYFRFVYQRAYAAAQK
RIKFLFSFSKEEFYFQAVRNHPEFIQRVPQYLIASYLGFTPEYLSEIRRRLLS

Sequences:

>Translated_213_residues
MQQRRSDYRSRPRVKTNKPLTPMHDIFKNHIAKFAQVTDDEFEQIIKFFDIKKAAKKENLLEEGQICRHHYFVLEGLLRK
FYINEKGTEQTTEFAIETWWLTDNFAYENQLATEFYIQAVEKSTLLCITPEKRQKLLEEFPVMERYFRFVYQRAYAAAQK
RIKFLFSFSKEEFYFQAVRNHPEFIQRVPQYLIASYLGFTPEYLSEIRRRLLS
>Mature_213_residues
MQQRRSDYRSRPRVKTNKPLTPMHDIFKNHIAKFAQVTDDEFEQIIKFFDIKKAAKKENLLEEGQICRHHYFVLEGLLRK
FYINEKGTEQTTEFAIETWWLTDNFAYENQLATEFYIQAVEKSTLLCITPEKRQKLLEEFPVMERYFRFVYQRAYAAAQK
RIKFLFSFSKEEFYFQAVRNHPEFIQRVPQYLIASYLGFTPEYLSEIRRRLLS

Specific function: Unknown

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25860; Mature: 25860

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQRRSDYRSRPRVKTNKPLTPMHDIFKNHIAKFAQVTDDEFEQIIKFFDIKKAAKKENL
CCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LEEGQICRHHYFVLEGLLRKFYINEKGTEQTTEFAIETWWLTDNFAYENQLATEFYIQAV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH
EKSTLLCITPEKRQKLLEEFPVMERYFRFVYQRAYAAAQKRIKFLFSFSKEEFYFQAVRN
HCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPEFIQRVPQYLIASYLGFTPEYLSEIRRRLLS
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQQRRSDYRSRPRVKTNKPLTPMHDIFKNHIAKFAQVTDDEFEQIIKFFDIKKAAKKENL
CCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LEEGQICRHHYFVLEGLLRKFYINEKGTEQTTEFAIETWWLTDNFAYENQLATEFYIQAV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH
EKSTLLCITPEKRQKLLEEFPVMERYFRFVYQRAYAAAQKRIKFLFSFSKEEFYFQAVRN
HCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPEFIQRVPQYLIASYLGFTPEYLSEIRRRLLS
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA