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The map label for this gene is yfjY [C]

Identifier: 146301324

GI number: 146301324

Start: 4276305

End: 4276775

Strand: Direct

Name: yfjY [C]

Synonym: Fjoh_3582

Alternate gene names: 146301324

Gene position: 4276305-4276775 (Clockwise)

Preceding gene: 146301323

Following gene: 146301325

Centisome position: 70.14

GC content: 47.13

Gene sequence:

>471_bases
ATGAAAACAGCGGCAGAAACCCAGAAATTGGACATCATTTCAGAAATTGAACTGATATACAGATCAAAAGTCAGCGCATC
ACAGCGTCCTCAAATAACATCGTCCCGAAGAGCCTACGAACTGGCGCTCCAGAACTGGGACGAAAATAAGATTGAATTTA
TCGAGCAGTGCAAAATCATGCTGCTCAGCCAGTCCCACAAAGTGCTTGGAATATATGAAATGTCATCAGGAGGCATCGCG
GGGACTGTTGTGGATATCCGCCTATTATTCACTGCCGCGCTCAAGGCGGCTGCGGTTAATGTGATCCTTATCCACAATCA
TCCCTCCGGAAACACGGCTCCTTCTGATGCCGACAGACAGATAACCTCAAAAGCAGTTAAGGCCGGACAGTTTCTTGATG
TGAAAATCCTGGATCATCTGATCATTTCATCCGAGTCTTACTACTCATTTGCAGACGACGGCGCCCTCTAG

Upstream 100 bases:

>100_bases
CCATAAATGCGAATCGGGGCTTCGCTTTATTGCGTTGCTTTTTGCGCTCGCTCTGCTCTGCCCGCCAGAAGTGCTGTTAT
TAATCTTAAATCATTGCACC

Downstream 100 bases:

>100_bases
CGCCGTTTTATATAAAAAGAGATTCCGCCGTTCCCACCGCGGCGGATCCTCTTTTTTTCTTTTTCTTAACCATGAACATG
TCCGCACTTCTAATATGACA

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKTAAETQKLDIISEIELIYRSKVSASQRPQITSSRRAYELALQNWDENKIEFIEQCKIMLLSQSHKVLGIYEMSSGGIA
GTVVDIRLLFTAALKAAAVNVILIHNHPSGNTAPSDADRQITSKAVKAGQFLDVKILDHLIISSESYYSFADDGAL

Sequences:

>Translated_156_residues
MKTAAETQKLDIISEIELIYRSKVSASQRPQITSSRRAYELALQNWDENKIEFIEQCKIMLLSQSHKVLGIYEMSSGGIA
GTVVDIRLLFTAALKAAAVNVILIHNHPSGNTAPSDADRQITSKAVKAGQFLDVKILDHLIISSESYYSFADDGAL
>Mature_156_residues
MKTAAETQKLDIISEIELIYRSKVSASQRPQITSSRRAYELALQNWDENKIEFIEQCKIMLLSQSHKVLGIYEMSSGGIA
GTVVDIRLLFTAALKAAAVNVILIHNHPSGNTAPSDADRQITSKAVKAGQFLDVKILDHLIISSESYYSFADDGAL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788997, Length=117, Percent_Identity=38.4615384615385, Blast_Score=86, Evalue=9e-19,
Organism=Escherichia coli, GI87082300, Length=96, Percent_Identity=38.5416666666667, Blast_Score=79, Evalue=1e-16,
Organism=Escherichia coli, GI2367100, Length=102, Percent_Identity=37.2549019607843, Blast_Score=79, Evalue=1e-16,
Organism=Escherichia coli, GI1788312, Length=102, Percent_Identity=36.2745098039216, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 17168; Mature: 17168

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAAETQKLDIISEIELIYRSKVSASQRPQITSSRRAYELALQNWDENKIEFIEQCKIM
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHH
LLSQSHKVLGIYEMSSGGIAGTVVDIRLLFTAALKAAAVNVILIHNHPSGNTAPSDADRQ
HCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHH
ITSKAVKAGQFLDVKILDHLIISSESYYSFADDGAL
HHHHHHHCCCEEHHHHHHHHHHCCCCCEECCCCCCC
>Mature Secondary Structure
MKTAAETQKLDIISEIELIYRSKVSASQRPQITSSRRAYELALQNWDENKIEFIEQCKIM
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHH
LLSQSHKVLGIYEMSSGGIAGTVVDIRLLFTAALKAAAVNVILIHNHPSGNTAPSDADRQ
HCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHH
ITSKAVKAGQFLDVKILDHLIISSESYYSFADDGAL
HHHHHHHCCCEEHHHHHHHHHHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA