| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301325
Identifier: 146301325
GI number: 146301325
Start: 4277174
End: 4277971
Strand: Direct
Name: 146301325
Synonym: Fjoh_3583
Alternate gene names: NA
Gene position: 4277174-4277971 (Clockwise)
Preceding gene: 146301324
Following gene: 146301326
Centisome position: 70.15
GC content: 41.98
Gene sequence:
>798_bases ATGAATATCGCATTTACGACAATCCTGCTGTTTGTTATACTTGCCCCCGGCTTTATTGCCCGAAATGCCTATAATTCTTC AAAATTAAGCGTTAAGGATTACAATAGGAATCTTGTAAATGATTTGACATGGTCGATCATTCCCTCACTGGCCTTCCATA CCATTTTTATTGCTGTACTGCACAATGCCACTAGCTACTGCGTCGACTTTGAACAGCTGGGCAATCTTATTCTGGCAGTG CCGGCTAAATCGGAGGACAGCTTCAGACAGCTCGGAAATTTCAAGTACGCCATCTTTTCCTACAACTTCATTCTATTTGT CCTGTCTTTTTTTGCGGGTCTCGGACTTAGGGAATTTGTAAGGAAGCGCCACATCGATAGAAAAGTCCGATACTTCAGAT TCTCCAATAAATGGCATTACATCTTTACCGGAGAATGTCTTGATTTTCCCGACGTGCCGGACCAGTATGAAGAGATAACC GATAAGATAATAAATGTTTTGTGTAAAGTGAACGGCAGAAGTGTCCTGTATACAGGAGAATATTTTAATTACTACATAGA CAGCAAGGGAGACCTTGAAGCGGTGCACCTGCGAAATCCCATACGCAGATATCTCGAAAACGATAACGATCCGGAGCAGC AGTATTACGTGATCTCAAGCAGGTATCTGGTAATTCCAAACTCGGATATCATTAATATCAATTTCCGCTATCTTTCCATG CAGGAAATTGACGAAACCGAAATCACCGCATCGGAAAGACAAAACCTGATTGAACTTGCTCCAGGGGAAAACCTATAA
Upstream 100 bases:
>100_bases TCTGGTTAGGATTGCGCACAAAATCAGTTCGGTAAGCTCTGAACCTCAGGTTATAAAAATAGGCGAAAAATATTTTAGAG TTCGCGAACTGGGCTAAAAT
Downstream 100 bases:
>100_bases AAGCGCAGAGCTTTTTAAACCAAAGCAATATCAGATCTAACTTCTTTTTCCAATAATAAATATCTTTTCATAAGGCCGCA TTGCAAAAATTGCACTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MNIAFTTILLFVILAPGFIARNAYNSSKLSVKDYNRNLVNDLTWSIIPSLAFHTIFIAVLHNATSYCVDFEQLGNLILAV PAKSEDSFRQLGNFKYAIFSYNFILFVLSFFAGLGLREFVRKRHIDRKVRYFRFSNKWHYIFTGECLDFPDVPDQYEEIT DKIINVLCKVNGRSVLYTGEYFNYYIDSKGDLEAVHLRNPIRRYLENDNDPEQQYYVISSRYLVIPNSDIININFRYLSM QEIDETEITASERQNLIELAPGENL
Sequences:
>Translated_265_residues MNIAFTTILLFVILAPGFIARNAYNSSKLSVKDYNRNLVNDLTWSIIPSLAFHTIFIAVLHNATSYCVDFEQLGNLILAV PAKSEDSFRQLGNFKYAIFSYNFILFVLSFFAGLGLREFVRKRHIDRKVRYFRFSNKWHYIFTGECLDFPDVPDQYEEIT DKIINVLCKVNGRSVLYTGEYFNYYIDSKGDLEAVHLRNPIRRYLENDNDPEQQYYVISSRYLVIPNSDIININFRYLSM QEIDETEITASERQNLIELAPGENL >Mature_265_residues MNIAFTTILLFVILAPGFIARNAYNSSKLSVKDYNRNLVNDLTWSIIPSLAFHTIFIAVLHNATSYCVDFEQLGNLILAV PAKSEDSFRQLGNFKYAIFSYNFILFVLSFFAGLGLREFVRKRHIDRKVRYFRFSNKWHYIFTGECLDFPDVPDQYEEIT DKIINVLCKVNGRSVLYTGEYFNYYIDSKGDLEAVHLRNPIRRYLENDNDPEQQYYVISSRYLVIPNSDIININFRYLSM QEIDETEITASERQNLIELAPGENL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30948; Mature: 30948
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIAFTTILLFVILAPGFIARNAYNSSKLSVKDYNRNLVNDLTWSIIPSLAFHTIFIAVL CCHHHHHHHHHHHHCCCHHHHCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH HNATSYCVDFEQLGNLILAVPAKSEDSFRQLGNFKYAIFSYNFILFVLSFFAGLGLREFV HCCHHHEEEHHHHCCEEEEECCCCCHHHHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHHH RKRHIDRKVRYFRFSNKWHYIFTGECLDFPDVPDQYEEITDKIINVLCKVNGRSVLYTGE HHHHHHHHHHEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC YFNYYIDSKGDLEAVHLRNPIRRYLENDNDPEQQYYVISSRYLVIPNSDIININFRYLSM EEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEECEEEEECCCCEEEEEEEEEEH QEIDETEITASERQNLIELAPGENL HHCCCHHCCHHHHCCEEEECCCCCC >Mature Secondary Structure MNIAFTTILLFVILAPGFIARNAYNSSKLSVKDYNRNLVNDLTWSIIPSLAFHTIFIAVL CCHHHHHHHHHHHHCCCHHHHCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH HNATSYCVDFEQLGNLILAVPAKSEDSFRQLGNFKYAIFSYNFILFVLSFFAGLGLREFV HCCHHHEEEHHHHCCEEEEECCCCCHHHHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHHH RKRHIDRKVRYFRFSNKWHYIFTGECLDFPDVPDQYEEITDKIINVLCKVNGRSVLYTGE HHHHHHHHHHEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC YFNYYIDSKGDLEAVHLRNPIRRYLENDNDPEQQYYVISSRYLVIPNSDIININFRYLSM EEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCEEEEEECEEEEECCCCEEEEEEEEEEH QEIDETEITASERQNLIELAPGENL HHCCCHHCCHHHHCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA