| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301323
Identifier: 146301323
GI number: 146301323
Start: 4274744
End: 4276060
Strand: Direct
Name: 146301323
Synonym: Fjoh_3581
Alternate gene names: NA
Gene position: 4274744-4276060 (Clockwise)
Preceding gene: 146301322
Following gene: 146301324
Centisome position: 70.11
GC content: 42.6
Gene sequence:
>1317_bases ATGACACCAAAAACCATCATCGAAAAACAGATTACAGCGCTCAGCGCATCACTTGCACCTATATCTGCTGATGTGACCGC TTGGGCGGAAAAGACGATTTTCCTTAAATGGGGCGTTCTTTCTCGTGGTAAATTTCATTGTTTGGACTGCTCTCACGCTT GGAAGCCTGACAGCCGTACACCTGAATGCCAGGACTATATCAAATGCACCGCCTGTCAGGGAAAACTTAAGATGCAGCCC TATAACAAAACGCATTTCAAGGAAATTGAATACTCCGCTTTATTGGACACCACAGCAGATTTTCAGGTGGTTCGCATTAT CTGTTCCCACAAGCAGATGAAGAAAGGTTTTGCGCCGACCTATTTTCATAAAGAGGTCATGCAGCATTGGATTAATCCTA AAGGAGAAGTGCGCACCATGTCGCTTAGCTGTAATGTATTTTCTCAGGCGTACGACCAATGGAAATATTACTCTCCCCTT GAAATTCGCCCAAAGGATTTTCAGAACTCTACCAAATTTTGCATTGCACCCTACAGGGTTTATCCAAAGCAGAAAGTGGT CAGTTCTCTTAAAAGAAACGGATTTAAAACGGCATTCCATAATATCCCACCGCAGATTCTTTTCTCTGCCCTGCTGAAAG ATCCACTTGCTGAAACGCTCTTGAAATTGTCTCAGATTTCTATGCTGAGGTATTATCTGACTTCGCATGAACAGCACCTC AAACAGAACTGGCAGGCGGTAAAAACCTGCCTTAAGCATGGATATGTTATTTCCGACTACGGGATTTGGGAGGATTATAT AAGCCTTTTAAGATGGTTCAAAAAAGACCTCAGCTGTGCGTCATATGTCTGTCCTGAAAACCTGCTTGAATCCCACGATA GGCTTGTAAGCAGAAAACGAGCCATTCAGCGAAAAAAATATCTCTTACAGATGCGCTCGGAAATACTTCAGGCGCAGAGT GTTTATGCCGAGGAGAAAAAGGAATTTTTCGGGCTCTGTTTTTCCGAAAAAAAACTGACGGTTTCGGTAATCGAAAATGT ACGGGAATTTATGGAAGAGGGCGACAACCTCAGCCACTGCGTGTTTACCAACGAGTACTACAAGAAAAAAAATTCCCTTA TACTTTCCGCTAAAGTGGATGACTGCTCTGTGGAAACCATTGAGCTTTCCCTTAAAAATATGGAAATCATCCAGTGCAGG GGATTGAAAAACAATGCATCAAAACACCATAGACAGATATTACGGCTTATGAACCGAAATCTTTACCAGATAAAGGCGCG CATGAAGAAAAAGACAACGACAGCCAAAGAAATTTAA
Upstream 100 bases:
>100_bases ATGCCAAACAGGTTATTCCCGATGCACCTGTTCCTGCAACAGACATTCCCTTGCAAAAGACCGCCAAACAGGCACAGACA ACCCTAACGCTTTTTGACCT
Downstream 100 bases:
>100_bases AGCCGGAACTATTCCGGCTTTTTTCTTGCGGAGCAGACACCTTAAAGCCTGGCAGCCTATCTAAGTTTTAAAGCGGTATA GGTCTAGATTAAATACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MTPKTIIEKQITALSASLAPISADVTAWAEKTIFLKWGVLSRGKFHCLDCSHAWKPDSRTPECQDYIKCTACQGKLKMQP YNKTHFKEIEYSALLDTTADFQVVRIICSHKQMKKGFAPTYFHKEVMQHWINPKGEVRTMSLSCNVFSQAYDQWKYYSPL EIRPKDFQNSTKFCIAPYRVYPKQKVVSSLKRNGFKTAFHNIPPQILFSALLKDPLAETLLKLSQISMLRYYLTSHEQHL KQNWQAVKTCLKHGYVISDYGIWEDYISLLRWFKKDLSCASYVCPENLLESHDRLVSRKRAIQRKKYLLQMRSEILQAQS VYAEEKKEFFGLCFSEKKLTVSVIENVREFMEEGDNLSHCVFTNEYYKKKNSLILSAKVDDCSVETIELSLKNMEIIQCR GLKNNASKHHRQILRLMNRNLYQIKARMKKKTTTAKEI
Sequences:
>Translated_438_residues MTPKTIIEKQITALSASLAPISADVTAWAEKTIFLKWGVLSRGKFHCLDCSHAWKPDSRTPECQDYIKCTACQGKLKMQP YNKTHFKEIEYSALLDTTADFQVVRIICSHKQMKKGFAPTYFHKEVMQHWINPKGEVRTMSLSCNVFSQAYDQWKYYSPL EIRPKDFQNSTKFCIAPYRVYPKQKVVSSLKRNGFKTAFHNIPPQILFSALLKDPLAETLLKLSQISMLRYYLTSHEQHL KQNWQAVKTCLKHGYVISDYGIWEDYISLLRWFKKDLSCASYVCPENLLESHDRLVSRKRAIQRKKYLLQMRSEILQAQS VYAEEKKEFFGLCFSEKKLTVSVIENVREFMEEGDNLSHCVFTNEYYKKKNSLILSAKVDDCSVETIELSLKNMEIIQCR GLKNNASKHHRQILRLMNRNLYQIKARMKKKTTTAKEI >Mature_437_residues TPKTIIEKQITALSASLAPISADVTAWAEKTIFLKWGVLSRGKFHCLDCSHAWKPDSRTPECQDYIKCTACQGKLKMQPY NKTHFKEIEYSALLDTTADFQVVRIICSHKQMKKGFAPTYFHKEVMQHWINPKGEVRTMSLSCNVFSQAYDQWKYYSPLE IRPKDFQNSTKFCIAPYRVYPKQKVVSSLKRNGFKTAFHNIPPQILFSALLKDPLAETLLKLSQISMLRYYLTSHEQHLK QNWQAVKTCLKHGYVISDYGIWEDYISLLRWFKKDLSCASYVCPENLLESHDRLVSRKRAIQRKKYLLQMRSEILQAQSV YAEEKKEFFGLCFSEKKLTVSVIENVREFMEEGDNLSHCVFTNEYYKKKNSLILSAKVDDCSVETIELSLKNMEIIQCRG LKNNASKHHRQILRLMNRNLYQIKARMKKKTTTAKEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51187; Mature: 51056
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPKTIIEKQITALSASLAPISADVTAWAEKTIFLKWGVLSRGKFHCLDCSHAWKPDSRT CCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCCCEEEECCCCCCCCCCCC PECQDYIKCTACQGKLKMQPYNKTHFKEIEYSALLDTTADFQVVRIICSHKQMKKGFAPT CCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH YFHKEVMQHWINPKGEVRTMSLSCNVFSQAYDQWKYYSPLEIRPKDFQNSTKFCIAPYRV HHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCEE YPKQKVVSSLKRNGFKTAFHNIPPQILFSALLKDPLAETLLKLSQISMLRYYLTSHEQHL CCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQNWQAVKTCLKHGYVISDYGIWEDYISLLRWFKKDLSCASYVCPENLLESHDRLVSRKR HHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHH AIQRKKYLLQMRSEILQAQSVYAEEKKEFFGLCFSEKKLTVSVIENVREFMEEGDNLSHC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEE VFTNEYYKKKNSLILSAKVDDCSVETIELSLKNMEIIQCRGLKNNASKHHRQILRLMNRN EECHHHHHCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCC LYQIKARMKKKTTTAKEI HHHHHHHHHHHCCHHCCC >Mature Secondary Structure TPKTIIEKQITALSASLAPISADVTAWAEKTIFLKWGVLSRGKFHCLDCSHAWKPDSRT CCHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCCCEEEECCCCCCCCCCCC PECQDYIKCTACQGKLKMQPYNKTHFKEIEYSALLDTTADFQVVRIICSHKQMKKGFAPT CCHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH YFHKEVMQHWINPKGEVRTMSLSCNVFSQAYDQWKYYSPLEIRPKDFQNSTKFCIAPYRV HHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCEE YPKQKVVSSLKRNGFKTAFHNIPPQILFSALLKDPLAETLLKLSQISMLRYYLTSHEQHL CCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQNWQAVKTCLKHGYVISDYGIWEDYISLLRWFKKDLSCASYVCPENLLESHDRLVSRKR HHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHH AIQRKKYLLQMRSEILQAQSVYAEEKKEFFGLCFSEKKLTVSVIENVREFMEEGDNLSHC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEE VFTNEYYKKKNSLILSAKVDDCSVETIELSLKNMEIIQCRGLKNNASKHHRQILRLMNRN EECHHHHHCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCC LYQIKARMKKKTTTAKEI HHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA