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The map label for this gene is ynaI [C]

Identifier: 146300945

GI number: 146300945

Start: 3813131

End: 3814903

Strand: Reverse

Name: ynaI [C]

Synonym: Fjoh_3200

Alternate gene names: 146300945

Gene position: 3814903-3813131 (Counterclockwise)

Preceding gene: 146300946

Following gene: 146300944

Centisome position: 62.57

GC content: 38.69

Gene sequence:

>1773_bases
ATGATTTTAAGTGTGAAGCGTTTACTGTCCTCTTTGCTTTTATTAGCAGCATTACTGATAAATTCTAATGCAGTTACAGC
CCAATTATTGGGTTCAGCAAAAACTACAACAGAAGAACCGGTAAAAGTCCCGGAAGATTCTTTGGGAAGAAGAACACCTC
AGGGAACAGTTAATGGATTTATTAAAGCTATTGGCGAGCAGAATTACCTGCGTGCCAGCCAGTATCTTGTACTAAGTAAA
CGCTCTTACCGAAAAACAACTGAAAGAATACGCATAGTAAAAACATTTCAACAGCTTTTAGATCAGGGCGGTAACCTTTC
GCCCTCGTCCATTATAAGCAATAAAGAAACCGGGCGGACAGACGATGATCTGGCAACGGGTGTAGATCTTGTAGGGAATA
TTTCTACGGGTAAAGAAACCATACAGCTCTACGTAGAAAATCAATCAGATGACAGCCAGCCCGCATTATGGCTTTTCTCT
GCCGAAACAGTAGAATCCATACTTTCAGCCGATATTAGAGGAGAAAAAACTTTTTTAGATCGTATACTTCCGCATTATTT
AAAGGAACGAAAATTAGGAAACGTTCCTATTGGTCATTGGGCAGTAGTAGTTGTCATGACGATTTTATCCTATTTATTGG
CCAGAATATTAATTTTCGTAATAGGTTTTGTGATTCAAAAGCTATGGAAAAAAGCCGATACAGAAAATGGAACAGCAATT
ATAGAGGCATTGACACTGCCGGTTCACATGTATCTTACCGTAATTTTATTTGTCGCGTTTACACAGCGCATGGGAATTTC
CATAGTCGTCCGCCAGCGTTTTAGTATTATTATAATCACCATCGGAATCGTCGCTTTTTTAATACTGCTTTGGAGAATGA
CCGATTTTGTAAGCATGTTTGCGCGAAGCAGAATGAGCAGGAAAGGCCGAATTTCTGCCATATCAGCGATTTTATTTTTG
AGTCGTACTACTAAAGCTGCCATTGTTTTTGTTGGAATTATTGCAATTCTCGGAATTATTGGTGTAGATGTCACAGCAGG
ACTTGCGGCACTTGGTATTGGAGGTATCGCATTGGCTTTGGGAGCGCAGAAAACTATAGAAAACTTTGTTGGCAGTGTCA
GCCTTATTGCAGATCAGCCTTTAAGAGTAGGCGATTACTGCCGGGTTGATGATATTAAAGGAACAGTTGAGTCTATCGGA
ATGCGGTCTACCACACTTCGTACTTCTGCAAGAACTATTGTAACTATTCCTAACGGACAATTATCGGCCAGTAAAATAGA
AAATTTTGCCCATCGCGACCGTTTTATATTTAATCCGATATTTACCTTTAGGATGGAAACAACTCCTGACCAAATGCGTT
ATCTTTTAGTAGAACTAAGATCTTTGCTGTATGCTCATCCTGCAGTTTTAAATTCTCCGCCTATAGTTCGTTTTACAGGA
ATAACAGCAGATGCTTTAAAAGTTGAAATTACGGCATATATAGAAGCATTAAATTTTGAAATATCTCAAGAAGTACAAGA
AGATATCTTACTTAGAATGATGGATATTATAGAAGCAAGCGGAACATCATTAGCCTATCCGTCTCAAACATTGTATATGG
CTCAAGATAGTTCACCCTCAAATGAAAAAGCCGCCGCAGTTGCAGAAACTGTTAAAAAATGGAAAGAAAAAAATGAGTTG
CAGCTCCCTAAATTTGACCCTAAACGTGTTGAAGAAATAAAAGACAGTATTAAATACCCAGGAGAAGGCAGTTTTAAGCC
AAAAGAAGATTGA

Upstream 100 bases:

>100_bases
TTTTAAAGTTGATAATAAAAAAAGTATTGCCTGTTTTCCTATAGAAAGATTTCTTTTCTCTTCTATATTTCTTATTTTTA
GTATTCTAAAATAAGAAAGC

Downstream 100 bases:

>100_bases
TTTTTTTGATATGTCTATGTGTATGAAGTAATTAGAATTTGATATAAAAAATGTTTTTTGAAGAATATTTTATAAGATTT
TTTGATTCAAAATTTCAAAA

Product: mechanosensitive ion channel MscS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MILSVKRLLSSLLLLAALLINSNAVTAQLLGSAKTTTEEPVKVPEDSLGRRTPQGTVNGFIKAIGEQNYLRASQYLVLSK
RSYRKTTERIRIVKTFQQLLDQGGNLSPSSIISNKETGRTDDDLATGVDLVGNISTGKETIQLYVENQSDDSQPALWLFS
AETVESILSADIRGEKTFLDRILPHYLKERKLGNVPIGHWAVVVVMTILSYLLARILIFVIGFVIQKLWKKADTENGTAI
IEALTLPVHMYLTVILFVAFTQRMGISIVVRQRFSIIIITIGIVAFLILLWRMTDFVSMFARSRMSRKGRISAISAILFL
SRTTKAAIVFVGIIAILGIIGVDVTAGLAALGIGGIALALGAQKTIENFVGSVSLIADQPLRVGDYCRVDDIKGTVESIG
MRSTTLRTSARTIVTIPNGQLSASKIENFAHRDRFIFNPIFTFRMETTPDQMRYLLVELRSLLYAHPAVLNSPPIVRFTG
ITADALKVEITAYIEALNFEISQEVQEDILLRMMDIIEASGTSLAYPSQTLYMAQDSSPSNEKAAAVAETVKKWKEKNEL
QLPKFDPKRVEEIKDSIKYPGEGSFKPKED

Sequences:

>Translated_590_residues
MILSVKRLLSSLLLLAALLINSNAVTAQLLGSAKTTTEEPVKVPEDSLGRRTPQGTVNGFIKAIGEQNYLRASQYLVLSK
RSYRKTTERIRIVKTFQQLLDQGGNLSPSSIISNKETGRTDDDLATGVDLVGNISTGKETIQLYVENQSDDSQPALWLFS
AETVESILSADIRGEKTFLDRILPHYLKERKLGNVPIGHWAVVVVMTILSYLLARILIFVIGFVIQKLWKKADTENGTAI
IEALTLPVHMYLTVILFVAFTQRMGISIVVRQRFSIIIITIGIVAFLILLWRMTDFVSMFARSRMSRKGRISAISAILFL
SRTTKAAIVFVGIIAILGIIGVDVTAGLAALGIGGIALALGAQKTIENFVGSVSLIADQPLRVGDYCRVDDIKGTVESIG
MRSTTLRTSARTIVTIPNGQLSASKIENFAHRDRFIFNPIFTFRMETTPDQMRYLLVELRSLLYAHPAVLNSPPIVRFTG
ITADALKVEITAYIEALNFEISQEVQEDILLRMMDIIEASGTSLAYPSQTLYMAQDSSPSNEKAAAVAETVKKWKEKNEL
QLPKFDPKRVEEIKDSIKYPGEGSFKPKED
>Mature_590_residues
MILSVKRLLSSLLLLAALLINSNAVTAQLLGSAKTTTEEPVKVPEDSLGRRTPQGTVNGFIKAIGEQNYLRASQYLVLSK
RSYRKTTERIRIVKTFQQLLDQGGNLSPSSIISNKETGRTDDDLATGVDLVGNISTGKETIQLYVENQSDDSQPALWLFS
AETVESILSADIRGEKTFLDRILPHYLKERKLGNVPIGHWAVVVVMTILSYLLARILIFVIGFVIQKLWKKADTENGTAI
IEALTLPVHMYLTVILFVAFTQRMGISIVVRQRFSIIIITIGIVAFLILLWRMTDFVSMFARSRMSRKGRISAISAILFL
SRTTKAAIVFVGIIAILGIIGVDVTAGLAALGIGGIALALGAQKTIENFVGSVSLIADQPLRVGDYCRVDDIKGTVESIG
MRSTTLRTSARTIVTIPNGQLSASKIENFAHRDRFIFNPIFTFRMETTPDQMRYLLVELRSLLYAHPAVLNSPPIVRFTG
ITADALKVEITAYIEALNFEISQEVQEDILLRMMDIIEASGTSLAYPSQTLYMAQDSSPSNEKAAAVAETVKKWKEKNEL
QLPKFDPKRVEEIKDSIKYPGEGSFKPKED

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=292, Percent_Identity=26.7123287671233, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1789291, Length=214, Percent_Identity=28.9719626168224, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI1786670, Length=337, Percent_Identity=25.5192878338279, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 65263; Mature: 65263

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSVKRLLSSLLLLAALLINSNAVTAQLLGSAKTTTEEPVKVPEDSLGRRTPQGTVNGF
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCHHHHHH
IKAIGEQNYLRASQYLVLSKRSYRKTTERIRIVKTFQQLLDQGGNLSPSSIISNKETGRT
HHHHCCCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCC
DDDLATGVDLVGNISTGKETIQLYVENQSDDSQPALWLFSAETVESILSADIRGEKTFLD
CHHHHHCHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHHH
RILPHYLKERKLGNVPIGHWAVVVVMTILSYLLARILIFVIGFVIQKLWKKADTENGTAI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IEALTLPVHMYLTVILFVAFTQRMGISIVVRQRFSIIIITIGIVAFLILLWRMTDFVSMF
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSRMSRKGRISAISAILFLSRTTKAAIVFVGIIAILGIIGVDVTAGLAALGIGGIALAL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAQKTIENFVGSVSLIADQPLRVGDYCRVDDIKGTVESIGMRSTTLRTSARTIVTIPNGQ
CCHHHHHHHHCCCCEEECCCCCCCCCCEECHHHHHHHHCCCCHHEEECCCCEEEECCCCC
LSASKIENFAHRDRFIFNPIFTFRMETTPDQMRYLLVELRSLLYAHPAVLNSPPIVRFTG
CCHHHHHHHHHHCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEC
ITADALKVEITAYIEALNFEISQEVQEDILLRMMDIIEASGTSLAYPSQTLYMAQDSSPS
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
NEKAAAVAETVKKWKEKNELQLPKFDPKRVEEIKDSIKYPGEGSFKPKED
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MILSVKRLLSSLLLLAALLINSNAVTAQLLGSAKTTTEEPVKVPEDSLGRRTPQGTVNGF
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCHHHHHH
IKAIGEQNYLRASQYLVLSKRSYRKTTERIRIVKTFQQLLDQGGNLSPSSIISNKETGRT
HHHHCCCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCC
DDDLATGVDLVGNISTGKETIQLYVENQSDDSQPALWLFSAETVESILSADIRGEKTFLD
CHHHHHCHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCHHHHHH
RILPHYLKERKLGNVPIGHWAVVVVMTILSYLLARILIFVIGFVIQKLWKKADTENGTAI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IEALTLPVHMYLTVILFVAFTQRMGISIVVRQRFSIIIITIGIVAFLILLWRMTDFVSMF
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSRMSRKGRISAISAILFLSRTTKAAIVFVGIIAILGIIGVDVTAGLAALGIGGIALAL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAQKTIENFVGSVSLIADQPLRVGDYCRVDDIKGTVESIGMRSTTLRTSARTIVTIPNGQ
CCHHHHHHHHCCCCEEECCCCCCCCCCEECHHHHHHHHCCCCHHEEECCCCEEEECCCCC
LSASKIENFAHRDRFIFNPIFTFRMETTPDQMRYLLVELRSLLYAHPAVLNSPPIVRFTG
CCHHHHHHHHHHCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEC
ITADALKVEITAYIEALNFEISQEVQEDILLRMMDIIEASGTSLAYPSQTLYMAQDSSPS
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
NEKAAAVAETVKKWKEKNELQLPKFDPKRVEEIKDSIKYPGEGSFKPKED
CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]