| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300944
Identifier: 146300944
GI number: 146300944
Start: 3812257
End: 3812859
Strand: Reverse
Name: 146300944
Synonym: Fjoh_3199
Alternate gene names: NA
Gene position: 3812859-3812257 (Counterclockwise)
Preceding gene: 146300945
Following gene: 146300942
Centisome position: 62.54
GC content: 33.17
Gene sequence:
>603_bases ATGAGAATATTTTTTATGGCACTGCTTTTTTCTTTAAGTTCGTTTACCACTTACAAGACTGCGGACAATAAAGAAATTTT ATCTGAACTGGAAATGATAAGACTTACAGAACATGTAAATGAAATTAAAACATTTACTGCTTCAAATCATGGCTACAATA AGAAAATCGCTTTTCTTGTAGATATGAAGATCAAATCAGGTAAAAATCGTTTTTTTGTATACGACTTACAAAACAACCAA ATTATCGATCAAGGACTAGTTGCACATGGTTCAGGATCAGAAACCGGAATAAAAGGTGATATTCTTCAATTTAGCAACAC CCCAAATTCTAACTGTACATCATTAGGCCGTTATTCTGTTGAAAAACCTTATAAAGGTGTTTTCGGAAAAGCATTCAGAT TGAGCGGTATGGATGAAACGAACAGCAATGCTTTAAAAAGAGCTATCGTGCTGCACTGCTACAAAGAAGTTCCAGACGAT GAAAAAGAATACTACATAATAAACAGCCACGGCTGCCCAATGGTAAGTGAACTTTTCTTTAAAAGACTTGAAAAAATAAT TGACAGCTCAGATTCTAAAATCATGCTTTCAGTTTATTATTAA
Upstream 100 bases:
>100_bases CAAACATGGGAATTCTGTAAAATTTGTGCATAATTTTGCAATGTCAAAAAACTTGATAGGAGTCCCAAACTGCTTTTAAC TTTAATTTTACTGTCTTAAT
Downstream 100 bases:
>100_bases AAATCAGAGTGCAATTTTTAGCAGAAACTGCTAAAACAAAATATCAAATACAAAGGGAGCTTTTACAGCTCTCTTTTTTT ATACATCATTCCGCGTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRIFFMALLFSLSSFTTYKTADNKEILSELEMIRLTEHVNEIKTFTASNHGYNKKIAFLVDMKIKSGKNRFFVYDLQNNQ IIDQGLVAHGSGSETGIKGDILQFSNTPNSNCTSLGRYSVEKPYKGVFGKAFRLSGMDETNSNALKRAIVLHCYKEVPDD EKEYYIINSHGCPMVSELFFKRLEKIIDSSDSKIMLSVYY
Sequences:
>Translated_200_residues MRIFFMALLFSLSSFTTYKTADNKEILSELEMIRLTEHVNEIKTFTASNHGYNKKIAFLVDMKIKSGKNRFFVYDLQNNQ IIDQGLVAHGSGSETGIKGDILQFSNTPNSNCTSLGRYSVEKPYKGVFGKAFRLSGMDETNSNALKRAIVLHCYKEVPDD EKEYYIINSHGCPMVSELFFKRLEKIIDSSDSKIMLSVYY >Mature_200_residues MRIFFMALLFSLSSFTTYKTADNKEILSELEMIRLTEHVNEIKTFTASNHGYNKKIAFLVDMKIKSGKNRFFVYDLQNNQ IIDQGLVAHGSGSETGIKGDILQFSNTPNSNCTSLGRYSVEKPYKGVFGKAFRLSGMDETNSNALKRAIVLHCYKEVPDD EKEYYIINSHGCPMVSELFFKRLEKIIDSSDSKIMLSVYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22822; Mature: 22822
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFFMALLFSLSSFTTYKTADNKEILSELEMIRLTEHVNEIKTFTASNHGYNKKIAFLV CHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEE DMKIKSGKNRFFVYDLQNNQIIDQGLVAHGSGSETGIKGDILQFSNTPNSNCTSLGRYSV EEEEECCCCEEEEEECCCCEECCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC EKPYKGVFGKAFRLSGMDETNSNALKRAIVLHCYKEVPDDEKEYYIINSHGCPMVSELFF CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHH KRLEKIIDSSDSKIMLSVYY HHHHHHHCCCCCEEEEEEEC >Mature Secondary Structure MRIFFMALLFSLSSFTTYKTADNKEILSELEMIRLTEHVNEIKTFTASNHGYNKKIAFLV CHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEE DMKIKSGKNRFFVYDLQNNQIIDQGLVAHGSGSETGIKGDILQFSNTPNSNCTSLGRYSV EEEEECCCCEEEEEECCCCEECCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC EKPYKGVFGKAFRLSGMDETNSNALKRAIVLHCYKEVPDDEKEYYIINSHGCPMVSELFF CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHH KRLEKIIDSSDSKIMLSVYY HHHHHHHCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA