| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is phoB [H]
Identifier: 146300946
GI number: 146300946
Start: 3815025
End: 3815477
Strand: Reverse
Name: phoB [H]
Synonym: Fjoh_3201
Alternate gene names: 146300946
Gene position: 3815477-3815025 (Counterclockwise)
Preceding gene: 146300947
Following gene: 146300945
Centisome position: 62.58
GC content: 32.67
Gene sequence:
>453_bases ATGAATAAAAAAATAATTTTGCTGGCTGACGATGACAGGGATGATATAGAAATGTTTTGCGAAGCCTTAGAAATGGTTAA TGAAAATGTTATCTGCGAGTGTGCAGAAAACGGTGATCAGGCGTGGCGTATGCTAAACGACAACAATGAAAAACCACAGC TTATCTTTCTGGATATTAATATGCCTATTATGAATGGATGGGAATGTCTGAAATTAATAAAAAAAGATGAAAATTATCAG GATATTCCCGTGATCATGATTTCAACATCTTCACATAAAAATGATATGGAGACGGCTTCTAAGCTGGGAGCACTAGGTTA TTTTGTAAAACCAAATGATTTTAATGATTTAAAAAGCATGCTCAAAATTATAACTTCTAATGAGGGAACAGATTTAAGTG ATGCTTTACATAATCTGCAAAACAGTGGTTCAAAATACATTTTTCATTTGTAA
Upstream 100 bases:
>100_bases AACGCCATGCAGGAACTATAACTGCATCGGGAAGTCCATATAATGGAGCAGTATTTACTATAGTGCTTCCTTTGAAACAA GAAGAAAATGATATTTAAAT
Downstream 100 bases:
>100_bases AAGAGTTCAAAACAACCCTTATTTTAAAGTTGATAATAAAAAAAGTATTGCCTGTTTTCCTATAGAAAGATTTCTTTTCT CTTCTATATTTCTTATTTTT
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MNKKIILLADDDRDDIEMFCEALEMVNENVICECAENGDQAWRMLNDNNEKPQLIFLDINMPIMNGWECLKLIKKDENYQ DIPVIMISTSSHKNDMETASKLGALGYFVKPNDFNDLKSMLKIITSNEGTDLSDALHNLQNSGSKYIFHL
Sequences:
>Translated_150_residues MNKKIILLADDDRDDIEMFCEALEMVNENVICECAENGDQAWRMLNDNNEKPQLIFLDINMPIMNGWECLKLIKKDENYQ DIPVIMISTSSHKNDMETASKLGALGYFVKPNDFNDLKSMLKIITSNEGTDLSDALHNLQNSGSKYIFHL >Mature_150_residues MNKKIILLADDDRDDIEMFCEALEMVNENVICECAENGDQAWRMLNDNNEKPQLIFLDINMPIMNGWECLKLIKKDENYQ DIPVIMISTSSHKNDMETASKLGALGYFVKPNDFNDLKSMLKIITSNEGTDLSDALHNLQNSGSKYIFHL
Specific function: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by phoB and phoR when phosphate is limited [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR011879 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 17164; Mature: 17164
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKIILLADDDRDDIEMFCEALEMVNENVICECAENGDQAWRMLNDNNEKPQLIFLDIN CCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEEEC MPIMNGWECLKLIKKDENYQDIPVIMISTSSHKNDMETASKLGALGYFVKPNDFNDLKSM CCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCEEEECCCCHHHHHHH LKIITSNEGTDLSDALHNLQNSGSKYIFHL HHHHHCCCCCCHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure MNKKIILLADDDRDDIEMFCEALEMVNENVICECAENGDQAWRMLNDNNEKPQLIFLDIN CCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEEEC MPIMNGWECLKLIKKDENYQDIPVIMISTSSHKNDMETASKLGALGYFVKPNDFNDLKSM CCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCEEEECCCCHHHHHHH LKIITSNEGTDLSDALHNLQNSGSKYIFHL HHHHHCCCCCCHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2115874; 10984043 [H]