| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300942
Identifier: 146300942
GI number: 146300942
Start: 3810614
End: 3811222
Strand: Reverse
Name: 146300942
Synonym: Fjoh_3197
Alternate gene names: NA
Gene position: 3811222-3810614 (Counterclockwise)
Preceding gene: 146300944
Following gene: 146300941
Centisome position: 62.51
GC content: 35.3
Gene sequence:
>609_bases ATGAAAACTATAAAGCGTAAAAAAGAAACCGCCGTAATTTTGCCTTATGCGGTATCTAAAGAAGCAGTTGATTTTTGTAT TGAAACTGCCGGACCTGCTCATACTTTATGGATAAACGAAATTTGTGAAGTAACATTACTGTCAGCCATAGCACGTGGTA CAGGTATATCCGGACGTTCACCAGAACTTCTTAAGGAAAAAATGAAAAAGGGAGAAGCTGTTATTGCATTTACAGCAGAT GGAAGATGGGCAGGTTTTTCATTTATTTCTTCTTGGGAAAACGGCCGTTATGTTTCAAATTCTGGTTTGATTGTTGCGCC AGATTTCAGGCATACCGGATTAGCGAAAAAAATTAAAAGAAAGATTTTTGAACTTAGTATTCAAAAATATCCTAATGCTA AAATATTCAGCCTTACAACTGGTCTTGCGGTAATGAAAATGAATCATGAACTGGGATTTGAACCTGTAACATATTCAGAA CTGCCCGGTGACGAAGAATTTTGGGATAATTGCAAAACCTGTGTCAATTGTCCTATTTTAAAAAGTAAGGACAGAAAAAA CTGTTTATGCACTGCAATGCTTTATGATCCAAAAAATATTCAAATATAA
Upstream 100 bases:
>100_bases TATCGCTCTTTTGCTGATCTCACAAATAGTTTAGCTGTTTTGAGTTTAGCATTTGAATTTCGATAGAGTAGTATTACAAA TAGAAATTTTCTAAACTGAT
Downstream 100 bases:
>100_bases AACAGACTCCGTGTTTGCTGTAAAAATTAGTAACAAAATTGATTTTTGATGCGTATATTTGATATAGTAAAAAAAGGAAG CATTTATGAAAAAGCTAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKTIKRKKETAVILPYAVSKEAVDFCIETAGPAHTLWINEICEVTLLSAIARGTGISGRSPELLKEKMKKGEAVIAFTAD GRWAGFSFISSWENGRYVSNSGLIVAPDFRHTGLAKKIKRKIFELSIQKYPNAKIFSLTTGLAVMKMNHELGFEPVTYSE LPGDEEFWDNCKTCVNCPILKSKDRKNCLCTAMLYDPKNIQI
Sequences:
>Translated_202_residues MKTIKRKKETAVILPYAVSKEAVDFCIETAGPAHTLWINEICEVTLLSAIARGTGISGRSPELLKEKMKKGEAVIAFTAD GRWAGFSFISSWENGRYVSNSGLIVAPDFRHTGLAKKIKRKIFELSIQKYPNAKIFSLTTGLAVMKMNHELGFEPVTYSE LPGDEEFWDNCKTCVNCPILKSKDRKNCLCTAMLYDPKNIQI >Mature_202_residues MKTIKRKKETAVILPYAVSKEAVDFCIETAGPAHTLWINEICEVTLLSAIARGTGISGRSPELLKEKMKKGEAVIAFTAD GRWAGFSFISSWENGRYVSNSGLIVAPDFRHTGLAKKIKRKIFELSIQKYPNAKIFSLTTGLAVMKMNHELGFEPVTYSE LPGDEEFWDNCKTCVNCPILKSKDRKNCLCTAMLYDPKNIQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22585; Mature: 22585
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIKRKKETAVILPYAVSKEAVDFCIETAGPAHTLWINEICEVTLLSAIARGTGISGRS CCCCCCCCCCEEEEEEHHCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCC PELLKEKMKKGEAVIAFTADGRWAGFSFISSWENGRYVSNSGLIVAPDFRHTGLAKKIKR HHHHHHHHHCCCEEEEEECCCCEECHHHHHCCCCCCEECCCCEEEECCCCCCHHHHHHHH KIFELSIQKYPNAKIFSLTTGLAVMKMNHELGFEPVTYSELPGDEEFWDNCKTCVNCPIL HHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC KSKDRKNCLCTAMLYDPKNIQI CCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MKTIKRKKETAVILPYAVSKEAVDFCIETAGPAHTLWINEICEVTLLSAIARGTGISGRS CCCCCCCCCCEEEEEEHHCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCC PELLKEKMKKGEAVIAFTADGRWAGFSFISSWENGRYVSNSGLIVAPDFRHTGLAKKIKR HHHHHHHHHCCCEEEEEECCCCEECHHHHHCCCCCCEECCCCEEEECCCCCCHHHHHHHH KIFELSIQKYPNAKIFSLTTGLAVMKMNHELGFEPVTYSELPGDEEFWDNCKTCVNCPIL HHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC KSKDRKNCLCTAMLYDPKNIQI CCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA