| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300941
Identifier: 146300941
GI number: 146300941
Start: 3809506
End: 3810528
Strand: Reverse
Name: 146300941
Synonym: Fjoh_3196
Alternate gene names: NA
Gene position: 3810528-3809506 (Counterclockwise)
Preceding gene: 146300942
Following gene: 146300940
Centisome position: 62.5
GC content: 41.94
Gene sequence:
>1023_bases ATGAAAAAGCTAGGATTTTTATCATTTGGGCATTGGTCAAATAATCCATCATATCAATCTCGTACAGCTGCTGATACACT GCTTCAATCTATCGATTTAGCAGTAGCTGCAGAACAAATAGGTTTAGACGGAGCTTATTTTCGTGTGCACCATTTTGCGC AGCAGCTCGCATCGCCTTTTCCTTTGCTTTCTGCAATTGGTGCAAAAACAAGCAAAATTGAGATAGGAACAGGTGTAATC GATATGCGGTACGAAAATCCATTGTATATGGTGGAAGACGCTGGCGCGGCCGATTTGATATCTGGAGGACGTTTACAACT GGGAATAAGCAGAGGTTCACCGGAACAGGTTATTGATGGATGGCATTATTTTGGTTACGAACCAATGGCTGGTGAAACTG ATGCCGATATGGGACGAAAAAAAGCATTGGATTTTTTAGAAGGACTTAAAGGTGAAGGATTTGCTGAACCTAATCCATAT CCAATGTTTCCAAATCCGCCGGGATTGTTACGTGTTGAACCACATTCTGAAGGATTAAGAGAACGAATTTGGTGGGGAGC TGCATCGAATGCAACTGCCGTTTGGGCAGCTGAAAACGGTATGCATCTTCAAAGTTCTACCCTTAAGTACGATGAAAACG GTAAACCCTTTCATGTCCAGCAGGCAGAACAGATTAGATTGTATAAGGAAGCTTGGGAAAAAGCAGGACATCAGCGTGAA GCAAGAGTTTCGGTAAGCCGTTCCATTTTTGCAATAGTTAACGAACAGGACAGGTATTACTTTGGCGGACAAGGCAAAGG AGCTGACAGTTTCGGTTATATCGAACGCGATAAAAGAGCTGTTTTTGGTAAAAGCTACGCAGCCGAACCAGACAAACTAA TCGAAGAACTGAGTCAGGACGAAGCGATTAAGGAAGCAGATACATTACTGCTTACAATTCCTAATACTTTGGGTGTAGAT TATAATGTACATATTTTGTCTTCAATTTTAGAACATATTGCTCCTGCATTAGGCTGGAGATAG
Upstream 100 bases:
>100_bases AATATTCAAATATAAAACAGACTCCGTGTTTGCTGTAAAAATTAGTAACAAAATTGATTTTTGATGCGTATATTTGATAT AGTAAAAAAAGGAAGCATTT
Downstream 100 bases:
>100_bases TTTTATAAAAATAAAGTAAAAAGCCCTCTATTTAAATGAGGGCTTTTATTTTATATGCTGCTTAAAATTTGACATTTAAT TTCCAAAAATATTGGTAAGC
Product: luciferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MKKLGFLSFGHWSNNPSYQSRTAADTLLQSIDLAVAAEQIGLDGAYFRVHHFAQQLASPFPLLSAIGAKTSKIEIGTGVI DMRYENPLYMVEDAGAADLISGGRLQLGISRGSPEQVIDGWHYFGYEPMAGETDADMGRKKALDFLEGLKGEGFAEPNPY PMFPNPPGLLRVEPHSEGLRERIWWGAASNATAVWAAENGMHLQSSTLKYDENGKPFHVQQAEQIRLYKEAWEKAGHQRE ARVSVSRSIFAIVNEQDRYYFGGQGKGADSFGYIERDKRAVFGKSYAAEPDKLIEELSQDEAIKEADTLLLTIPNTLGVD YNVHILSSILEHIAPALGWR
Sequences:
>Translated_340_residues MKKLGFLSFGHWSNNPSYQSRTAADTLLQSIDLAVAAEQIGLDGAYFRVHHFAQQLASPFPLLSAIGAKTSKIEIGTGVI DMRYENPLYMVEDAGAADLISGGRLQLGISRGSPEQVIDGWHYFGYEPMAGETDADMGRKKALDFLEGLKGEGFAEPNPY PMFPNPPGLLRVEPHSEGLRERIWWGAASNATAVWAAENGMHLQSSTLKYDENGKPFHVQQAEQIRLYKEAWEKAGHQRE ARVSVSRSIFAIVNEQDRYYFGGQGKGADSFGYIERDKRAVFGKSYAAEPDKLIEELSQDEAIKEADTLLLTIPNTLGVD YNVHILSSILEHIAPALGWR >Mature_340_residues MKKLGFLSFGHWSNNPSYQSRTAADTLLQSIDLAVAAEQIGLDGAYFRVHHFAQQLASPFPLLSAIGAKTSKIEIGTGVI DMRYENPLYMVEDAGAADLISGGRLQLGISRGSPEQVIDGWHYFGYEPMAGETDADMGRKKALDFLEGLKGEGFAEPNPY PMFPNPPGLLRVEPHSEGLRERIWWGAASNATAVWAAENGMHLQSSTLKYDENGKPFHVQQAEQIRLYKEAWEKAGHQRE ARVSVSRSIFAIVNEQDRYYFGGQGKGADSFGYIERDKRAVFGKSYAAEPDKLIEELSQDEAIKEADTLLLTIPNTLGVD YNVHILSSILEHIAPALGWR
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 37663; Mature: 37663
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLGFLSFGHWSNNPSYQSRTAADTLLQSIDLAVAAEQIGLDGAYFRVHHFAQQLASPF CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC PLLSAIGAKTSKIEIGTGVIDMRYENPLYMVEDAGAADLISGGRLQLGISRGSPEQVIDG HHHHHHCCCCCEEEECCCEEEEEECCCEEEEECCCCHHHCCCCEEEEEECCCCHHHHHCC WHYFGYEPMAGETDADMGRKKALDFLEGLKGEGFAEPNPYPMFPNPPGLLRVEPHSEGLR HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHH ERIWWGAASNATAVWAAENGMHLQSSTLKYDENGKPFHVQQAEQIRLYKEAWEKAGHQRE HHHEECCCCCCEEEEEECCCCEEECCCEEECCCCCEEEECHHHHHHHHHHHHHHCCCCHH ARVSVSRSIFAIVNEQDRYYFGGQGKGADSFGYIERDKRAVFGKSYAAEPDKLIEELSQD HHHHHHHEEEEEEECCCCEEECCCCCCCCCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHH EAIKEADTLLLTIPNTLGVDYNVHILSSILEHIAPALGWR HHHHHHCEEEEECCCHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLGFLSFGHWSNNPSYQSRTAADTLLQSIDLAVAAEQIGLDGAYFRVHHFAQQLASPF CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC PLLSAIGAKTSKIEIGTGVIDMRYENPLYMVEDAGAADLISGGRLQLGISRGSPEQVIDG HHHHHHCCCCCEEEECCCEEEEEECCCEEEEECCCCHHHCCCCEEEEEECCCCHHHHHCC WHYFGYEPMAGETDADMGRKKALDFLEGLKGEGFAEPNPYPMFPNPPGLLRVEPHSEGLR HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHH ERIWWGAASNATAVWAAENGMHLQSSTLKYDENGKPFHVQQAEQIRLYKEAWEKAGHQRE HHHEECCCCCCEEEEEECCCCEEECCCEEECCCCCEEEECHHHHHHHHHHHHHHCCCCHH ARVSVSRSIFAIVNEQDRYYFGGQGKGADSFGYIERDKRAVFGKSYAAEPDKLIEELSQD HHHHHHHEEEEEEECCCCEEECCCCCCCCCCCCHHCCCHHHHCCCCCCCHHHHHHHHHHH EAIKEADTLLLTIPNTLGVDYNVHILSSILEHIAPALGWR HHHHHHCEEEEECCCHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]