| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300940
Identifier: 146300940
GI number: 146300940
Start: 3808388
End: 3809323
Strand: Reverse
Name: 146300940
Synonym: Fjoh_3195
Alternate gene names: NA
Gene position: 3809323-3808388 (Counterclockwise)
Preceding gene: 146300941
Following gene: 146300938
Centisome position: 62.48
GC content: 34.08
Gene sequence:
>936_bases ATGCAGACGATATTAGGTGCCAGCGGGCAGATAGGAGAAGAACTTGCAAGAGAACTAAAAAGGAATTTTACTTCAGATAT TAGAATTGTAAGCCGAAAAGCTCAAAAAGTTAATGATACTGATACTGTTTTTTCAGCAGATTTAATCAATCGGGAAGAGG CTGTTGAAGCTGTTAAGGGAAGTGAAATTGCTTATTTTACATTGGGACTTCCTATGGATTCTGATTTATGGGAAAAACAA TTTTTGCTGATTTTAAAAAATACAATTGAAGCTTGTAAAATAAACAAAACAAAACTCGTATTTTTTGATAACACATATAT GTATCCGCAGGATAACAGAGTCCTTACAGAAGATACAGTTTTTGAGCCTGTGGGAAGAAAAGGGAAAATTAGAAAAGAGA TGGCTGAAATGGTTTTAAGCGAAATGCAGTCTGGTCAGTTAGAAGCTGTAATTTGCCGTGCACCTGAATTTTATGGACCT GATAAAACACAAAGTATTACGAACACATTAATTTTCAAGGCAGTTAAGGAACATAAAAAGCTAAAAGTACCTTTGAGCGC TACAAAGAAAAGAAGCCTTATTTGGACGCCTGATGCAAGCAGGGCGACAGCATTAATAGGAAATACTCCAGATGCTTTTT ATCAAACCTGGCATTTGCCTGTCGATGAAAGTCATCTTAGTTATAAAGAGTTTATTGCATTGGCCTCTAATGTTTATGGC AGAGAGTTAAAATATGCTGTTATTCCTAAGTTTGTATTTAAAATAGGGTCGCTTTTTAATAAAAGAATGAAAGAATTACA GGAACTGCTTCCGAGATATGAACATGATAATATTTTTGATGATTCGAAATTTAGAAAGCGTTTTCCGGATTTTGAAATAA CAAATTATAAAAAGGGAATCGAAAGGATTAAAGAGGAGCAGGAAATTAGTAAATAA
Upstream 100 bases:
>100_bases CCAAAAATATTGGTAAGCTCATTAGATTTGGATATAAACGGACTATGTACGGAATTAATTGTAATATGGTAATTAACAAA AATAAAACAGACTATATAAG
Downstream 100 bases:
>100_bases AAAAAGGAACTGATATTTCAGTTCCTTTTTTATTGCTTTTTAAAAGCTTTATTATTTTCCGCTTGAAGCAGTAATTTTTC CTAATTGAAGTCTAAAATCT
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; Sugar Dehydratase/Epimerase; Saccharopine Dehydrogenase Related Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; Saccharopine Dehydrogenase; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MQTILGASGQIGEELARELKRNFTSDIRIVSRKAQKVNDTDTVFSADLINREEAVEAVKGSEIAYFTLGLPMDSDLWEKQ FLLILKNTIEACKINKTKLVFFDNTYMYPQDNRVLTEDTVFEPVGRKGKIRKEMAEMVLSEMQSGQLEAVICRAPEFYGP DKTQSITNTLIFKAVKEHKKLKVPLSATKKRSLIWTPDASRATALIGNTPDAFYQTWHLPVDESHLSYKEFIALASNVYG RELKYAVIPKFVFKIGSLFNKRMKELQELLPRYEHDNIFDDSKFRKRFPDFEITNYKKGIERIKEEQEISK
Sequences:
>Translated_311_residues MQTILGASGQIGEELARELKRNFTSDIRIVSRKAQKVNDTDTVFSADLINREEAVEAVKGSEIAYFTLGLPMDSDLWEKQ FLLILKNTIEACKINKTKLVFFDNTYMYPQDNRVLTEDTVFEPVGRKGKIRKEMAEMVLSEMQSGQLEAVICRAPEFYGP DKTQSITNTLIFKAVKEHKKLKVPLSATKKRSLIWTPDASRATALIGNTPDAFYQTWHLPVDESHLSYKEFIALASNVYG RELKYAVIPKFVFKIGSLFNKRMKELQELLPRYEHDNIFDDSKFRKRFPDFEITNYKKGIERIKEEQEISK >Mature_311_residues MQTILGASGQIGEELARELKRNFTSDIRIVSRKAQKVNDTDTVFSADLINREEAVEAVKGSEIAYFTLGLPMDSDLWEKQ FLLILKNTIEACKINKTKLVFFDNTYMYPQDNRVLTEDTVFEPVGRKGKIRKEMAEMVLSEMQSGQLEAVICRAPEFYGP DKTQSITNTLIFKAVKEHKKLKVPLSATKKRSLIWTPDASRATALIGNTPDAFYQTWHLPVDESHLSYKEFIALASNVYG RELKYAVIPKFVFKIGSLFNKRMKELQELLPRYEHDNIFDDSKFRKRFPDFEITNYKKGIERIKEEQEISK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35913; Mature: 35913
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTILGASGQIGEELARELKRNFTSDIRIVSRKAQKVNDTDTVFSADLINREEAVEAVKG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCC SEIAYFTLGLPMDSDLWEKQFLLILKNTIEACKINKTKLVFFDNTYMYPQDNRVLTEDTV CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEECCCCCEEECCCHH FEPVGRKGKIRKEMAEMVLSEMQSGQLEAVICRAPEFYGPDKTQSITNTLIFKAVKEHKK HCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH LKVPLSATKKRSLIWTPDASRATALIGNTPDAFYQTWHLPVDESHLSYKEFIALASNVYG EECCCCCCCCCCEEECCCCCCCEEEECCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHC RELKYAVIPKFVFKIGSLFNKRMKELQELLPRYEHDNIFDDSKFRKRFPDFEITNYKKGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHH ERIKEEQEISK HHHHHHHHCCC >Mature Secondary Structure MQTILGASGQIGEELARELKRNFTSDIRIVSRKAQKVNDTDTVFSADLINREEAVEAVKG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCC SEIAYFTLGLPMDSDLWEKQFLLILKNTIEACKINKTKLVFFDNTYMYPQDNRVLTEDTV CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEECCCCCEEECCCHH FEPVGRKGKIRKEMAEMVLSEMQSGQLEAVICRAPEFYGPDKTQSITNTLIFKAVKEHKK HCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH LKVPLSATKKRSLIWTPDASRATALIGNTPDAFYQTWHLPVDESHLSYKEFIALASNVYG EECCCCCCCCCCEEECCCCCCCEEEECCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHC RELKYAVIPKFVFKIGSLFNKRMKELQELLPRYEHDNIFDDSKFRKRFPDFEITNYKKGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHH ERIKEEQEISK HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA