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The map label for this gene is fnr [C]

Identifier: 146300938

GI number: 146300938

Start: 3806077

End: 3806655

Strand: Reverse

Name: fnr [C]

Synonym: Fjoh_3193

Alternate gene names: 146300938

Gene position: 3806655-3806077 (Counterclockwise)

Preceding gene: 146300940

Following gene: 146300937

Centisome position: 62.44

GC content: 37.31

Gene sequence:

>579_bases
ATGTATGAAATATTCCAAAAATACCTTGAAGATAAAACTGAACTGACACAGGCAGAATCAGAACGTATACAATCATTTGC
TATTATTAAAAAACTTCGTAAAAGACAATATCTGCTTCAGGAAGGAGATGTCTGGAAATATGACGCCTTTATTACTCAGG
GTTGCGTTAGAACTTATACCGTAGATGAAAAAGGAAGCGAGCATGTAAACAGTTTTAGTATAGAGAACTGGTGGACAGGC
GACAGGGAGAGTTTAATGATGCAGCAGCCGTCACGGTTTAATATAGATGCTATAGAAGATACCGAGCTTGTTCTTTTTAC
TCATGAGAATTTTGAACTGCTGTGCAGAGAAATTCCCGCGTTTAATAATATGGTCAATACTATTTTGCAAAGAAGTTTTA
TAGCCGCTCAAAACAGAATTCAGGCTTCACTGACTTTAACAGCCGAAGAAAAGTATTTAAATTTTATAAATAAATACCCG
GGATTTGCTTCGAGGATTCCGCAGACCATGATTGCCTCATATCTGGGCATGACACCAGAAACGCTAAGCCGTATTCGAAA
ACAAACCGCAAAAAAATAA

Upstream 100 bases:

>100_bases
ATTGTGCCGAAAATTCCTAGAATTAACTTTCTTGCAATATCTCTTCTTCTCGTAAAATCAAATTTGCCGATAAAGACCCT
TTTATATAATTTTACATGCT

Downstream 100 bases:

>100_bases
TATCATCAGGAGCTTTTAAAGCTCCTTTTTTTATGCCTGCTTCAAACTCTTGATCTAAATCAAGTTTTTACTTATTTCTA
ATCAATGTACAGGTTTTGCA

Product: cyclic nucleotide-binding protein

Products: NA

Alternate protein names: Catabolite Gene Activator Protein; Crp/Fnr Family Transcriptional Regulator; Crp Family Transcriptional Regulator

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MYEIFQKYLEDKTELTQAESERIQSFAIIKKLRKRQYLLQEGDVWKYDAFITQGCVRTYTVDEKGSEHVNSFSIENWWTG
DRESLMMQQPSRFNIDAIEDTELVLFTHENFELLCREIPAFNNMVNTILQRSFIAAQNRIQASLTLTAEEKYLNFINKYP
GFASRIPQTMIASYLGMTPETLSRIRKQTAKK

Sequences:

>Translated_192_residues
MYEIFQKYLEDKTELTQAESERIQSFAIIKKLRKRQYLLQEGDVWKYDAFITQGCVRTYTVDEKGSEHVNSFSIENWWTG
DRESLMMQQPSRFNIDAIEDTELVLFTHENFELLCREIPAFNNMVNTILQRSFIAAQNRIQASLTLTAEEKYLNFINKYP
GFASRIPQTMIASYLGMTPETLSRIRKQTAKK
>Mature_192_residues
MYEIFQKYLEDKTELTQAESERIQSFAIIKKLRKRQYLLQEGDVWKYDAFITQGCVRTYTVDEKGSEHVNSFSIENWWTG
DRESLMMQQPSRFNIDAIEDTELVLFTHENFELLCREIPAFNNMVNTILQRSFIAAQNRIQASLTLTAEEKYLNFINKYP
GFASRIPQTMIASYLGMTPETLSRIRKQTAKK

Specific function: Global Transcription Factor That Controls The Expression Of Over 100 Target Genes In Response To Anoxia. It Facilitates The Adaptation To Anaerobic Growth Conditions By Regulating The Expression Of Gene Products That Are Involved In Anaerobic Energy Metab

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22576; Mature: 22576

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEIFQKYLEDKTELTQAESERIQSFAIIKKLRKRQYLLQEGDVWKYDAFITQGCVRTYT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHEEE
VDEKGSEHVNSFSIENWWTGDRESLMMQQPSRFNIDAIEDTELVLFTHENFELLCREIPA
ECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEECCCEEEEEECCCHHHHHHHCCH
FNNMVNTILQRSFIAAQNRIQASLTLTAEEKYLNFINKYPGFASRIPQTMIASYLGMTPE
HHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH
TLSRIRKQTAKK
HHHHHHHHHCCC
>Mature Secondary Structure
MYEIFQKYLEDKTELTQAESERIQSFAIIKKLRKRQYLLQEGDVWKYDAFITQGCVRTYT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHEEE
VDEKGSEHVNSFSIENWWTGDRESLMMQQPSRFNIDAIEDTELVLFTHENFELLCREIPA
ECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCEECCCEEEEEECCCHHHHHHHCCH
FNNMVNTILQRSFIAAQNRIQASLTLTAEEKYLNFINKYPGFASRIPQTMIASYLGMTPE
HHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH
TLSRIRKQTAKK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA