| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300939
Identifier: 146300939
GI number: 146300939
Start: 3807047
End: 3808336
Strand: Direct
Name: 146300939
Synonym: Fjoh_3194
Alternate gene names: NA
Gene position: 3807047-3808336 (Clockwise)
Preceding gene: 146300933
Following gene: 146300943
Centisome position: 62.44
GC content: 34.03
Gene sequence:
>1290_bases ATGAAAAAAATTACTCTAATGATTTGTTTACTGCTGACAGCTGCCGGCGTAAACGCACAACAAGAAAAAGGAATTATTGG TTACAACAACTGGCTGGACAACTGGACAGAATTTAAACCTCACAAGTCCGAATCTAAAGATGCAAATCAAATTTTAGCTG GAAACATTACTGAAAACACAAAACTGATGAAAAGAAACGTATACATTCTTCAGGGAAATGTTTATGTAACAAACAATGCA GTTTTGACTATTGAGCCAGGTACAACGATTATTGGCGATGTAAGTACTAAAGGTGCTTTAATCATCACTAAAGGTGCTAA AATAATGGCAGAAGGACAAGAAACTGATCCAATTGTGTTTACCTCAAACAGCAGCATGAAAAAAGCTGGAGACTGGGGTG GTTTAGTAATTCTTGGTGATGCTCCAATTAACAAATTTGGAAGCGTTGGCTCTTACAACATGGATCTTGATCCTGCTCTT ACTGTGTATGGTGGAAATAATACAGCATCAAACTCAGGAGTTTTAAAGTTTGTAAGAATTGAATTTGCTGGTAAAAGAGT AAAAGGTGCTGATACTTTTAACGCATTGACTATCGCAGGTGTAGGTAATAAAACTGTTATAGAAAATATCATGGTAAGTT ACTCAGGCGGTGATTCGTTTGCTTTTTACGGCGGAGATGTAAATGCTTCTCAGTTAGTTTCATACAAATCAATCAATGAT GATTTTAAATTTACACAAGGTATACAGTGTCGTTTATATAACTCGTTAGCAGTAAGATCTTCTTACTTATCAAGTAACAA AGACGGATCTAGATGTTTAGAGGTTAAAGCATACGAAAAGAAAAGCGAAACTGACTTTACGAAAAAATCTACATTTGTTT CTGCTACAAACATTACAATGTTGAATGACAGTGAAAAAATTAAAGCTGATATTCAGGCTGGTTTAGTAAAAGAAGCTGTG TATGTTGCTGAAAATGCTTCTTTAGAATTAAAAAGAAGTGTAGTTTCTGGATTTAATCCTGCGGTTTTAATTGACAGCAA AACTGAAATCAATGCCGAAAACCTAAAGAAAATCAAATTTGAAGAAATGTTTTTCAACCAATGCAGTGGTAACATTTTTG CAGAAAACAAAAGCGACAATTCAGATTTAGAAAACTGGTATGGAAACAGCGTTTTCTTTAACGTTTATTCACAAACGGAT AATAAAGAAACTTTTGTTGACGTATACAATGCAAAAAGACCAGATTTTAGACTTCAATTAGGAAAAATTACTGCTTCAAG CGGAAAATAA
Upstream 100 bases:
>100_bases TCACTTAACGGTTGCCGAAGGTCAAAAACAGCTGTATTGAATAAAAGCTTCGTTCTGAGATGTTTAAAAATTGTATAATA CCTAAATAGCCCCCAAGACT
Downstream 100 bases:
>100_bases TAAAGCTTTTAAAAAGCAATAAAAAAGGAACTGAAATATCAGTTCCTTTTTTTATTTACTAATTTCCTGCTCCTCTTTAA TCCTTTCGATTCCCTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein; Serine/Threonine Protein Kinase; Cell Surface Receptor IPT/TIG Domain Protein; Secreted Protein; Drug/Metabolite Permease; Non-Specific Serine/Threonine Protein Kinase; Parallel Beta-Helix Repeat Protein
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKKITLMICLLLTAAGVNAQQEKGIIGYNNWLDNWTEFKPHKSESKDANQILAGNITENTKLMKRNVYILQGNVYVTNNA VLTIEPGTTIIGDVSTKGALIITKGAKIMAEGQETDPIVFTSNSSMKKAGDWGGLVILGDAPINKFGSVGSYNMDLDPAL TVYGGNNTASNSGVLKFVRIEFAGKRVKGADTFNALTIAGVGNKTVIENIMVSYSGGDSFAFYGGDVNASQLVSYKSIND DFKFTQGIQCRLYNSLAVRSSYLSSNKDGSRCLEVKAYEKKSETDFTKKSTFVSATNITMLNDSEKIKADIQAGLVKEAV YVAENASLELKRSVVSGFNPAVLIDSKTEINAENLKKIKFEEMFFNQCSGNIFAENKSDNSDLENWYGNSVFFNVYSQTD NKETFVDVYNAKRPDFRLQLGKITASSGK
Sequences:
>Translated_429_residues MKKITLMICLLLTAAGVNAQQEKGIIGYNNWLDNWTEFKPHKSESKDANQILAGNITENTKLMKRNVYILQGNVYVTNNA VLTIEPGTTIIGDVSTKGALIITKGAKIMAEGQETDPIVFTSNSSMKKAGDWGGLVILGDAPINKFGSVGSYNMDLDPAL TVYGGNNTASNSGVLKFVRIEFAGKRVKGADTFNALTIAGVGNKTVIENIMVSYSGGDSFAFYGGDVNASQLVSYKSIND DFKFTQGIQCRLYNSLAVRSSYLSSNKDGSRCLEVKAYEKKSETDFTKKSTFVSATNITMLNDSEKIKADIQAGLVKEAV YVAENASLELKRSVVSGFNPAVLIDSKTEINAENLKKIKFEEMFFNQCSGNIFAENKSDNSDLENWYGNSVFFNVYSQTD NKETFVDVYNAKRPDFRLQLGKITASSGK >Mature_429_residues MKKITLMICLLLTAAGVNAQQEKGIIGYNNWLDNWTEFKPHKSESKDANQILAGNITENTKLMKRNVYILQGNVYVTNNA VLTIEPGTTIIGDVSTKGALIITKGAKIMAEGQETDPIVFTSNSSMKKAGDWGGLVILGDAPINKFGSVGSYNMDLDPAL TVYGGNNTASNSGVLKFVRIEFAGKRVKGADTFNALTIAGVGNKTVIENIMVSYSGGDSFAFYGGDVNASQLVSYKSIND DFKFTQGIQCRLYNSLAVRSSYLSSNKDGSRCLEVKAYEKKSETDFTKKSTFVSATNITMLNDSEKIKADIQAGLVKEAV YVAENASLELKRSVVSGFNPAVLIDSKTEINAENLKKIKFEEMFFNQCSGNIFAENKSDNSDLENWYGNSVFFNVYSQTD NKETFVDVYNAKRPDFRLQLGKITASSGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46907; Mature: 46907
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITLMICLLLTAAGVNAQQEKGIIGYNNWLDNWTEFKPHKSESKDANQILAGNITENT CCHHHHHHHHHHHHCCCCCHHHCCEEEECHHCCCCHHCCCCCCCCCCCCEEEECCCCCCC KLMKRNVYILQGNVYVTNNAVLTIEPGTTIIGDVSTKGALIITKGAKIMAEGQETDPIVF EEEEEEEEEEECCEEEECCEEEEECCCCEEEECCCCCCEEEEECCCEEEECCCCCCCEEE TSNSSMKKAGDWGGLVILGDAPINKFGSVGSYNMDLDPALTVYGGNNTASNSGVLKFVRI ECCCCCCCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEE EFAGKRVKGADTFNALTIAGVGNKTVIENIMVSYSGGDSFAFYGGDVNASQLVSYKSIND EECCCEECCCCCCCEEEEEECCCHHEEEEEEEEECCCCEEEEECCCCCHHHEEEEECCCC DFKFTQGIQCRLYNSLAVRSSYLSSNKDGSRCLEVKAYEKKSETDFTKKSTFVSATNITM CCCCCCCCEEEEECHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHCEEEEEEEEEE LNDSEKIKADIQAGLVKEAVYVAENASLELKRSVVSGFNPAVLIDSKTEINAENLKKIKF ECCCHHHHHHHHHHHHHHEEEEECCCCCEEHHHHHCCCCCEEEEECCCCCCHHHHHHEEH EEMFFNQCSGNIFAENKSDNSDLENWYGNSVFFNVYSQTDNKETFVDVYNAKRPDFRLQL HHHHHHHCCCCEEECCCCCCCCHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEE GKITASSGK EEEEECCCC >Mature Secondary Structure MKKITLMICLLLTAAGVNAQQEKGIIGYNNWLDNWTEFKPHKSESKDANQILAGNITENT CCHHHHHHHHHHHHCCCCCHHHCCEEEECHHCCCCHHCCCCCCCCCCCCEEEECCCCCCC KLMKRNVYILQGNVYVTNNAVLTIEPGTTIIGDVSTKGALIITKGAKIMAEGQETDPIVF EEEEEEEEEEECCEEEECCEEEEECCCCEEEECCCCCCEEEEECCCEEEECCCCCCCEEE TSNSSMKKAGDWGGLVILGDAPINKFGSVGSYNMDLDPALTVYGGNNTASNSGVLKFVRI ECCCCCCCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEE EFAGKRVKGADTFNALTIAGVGNKTVIENIMVSYSGGDSFAFYGGDVNASQLVSYKSIND EECCCEECCCCCCCEEEEEECCCHHEEEEEEEEECCCCEEEEECCCCCHHHEEEEECCCC DFKFTQGIQCRLYNSLAVRSSYLSSNKDGSRCLEVKAYEKKSETDFTKKSTFVSATNITM CCCCCCCCEEEEECHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHCEEEEEEEEEE LNDSEKIKADIQAGLVKEAVYVAENASLELKRSVVSGFNPAVLIDSKTEINAENLKKIKF ECCCHHHHHHHHHHHHHHEEEEECCCCCEEHHHHHCCCCCEEEEECCCCCCHHHHHHEEH EEMFFNQCSGNIFAENKSDNSDLENWYGNSVFFNVYSQTDNKETFVDVYNAKRPDFRLQL HHHHHHHCCCCEEECCCCCCCCHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEE GKITASSGK EEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA