| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300933
Identifier: 146300933
GI number: 146300933
Start: 3799168
End: 3799623
Strand: Direct
Name: 146300933
Synonym: Fjoh_3188
Alternate gene names: NA
Gene position: 3799168-3799623 (Clockwise)
Preceding gene: 146300932
Following gene: 146300939
Centisome position: 62.31
GC content: 35.96
Gene sequence:
>456_bases ATGGAACTTAAATTCAGCCACATCGATATCTTGGTTAAAGACCTTCAAACCGCTTGTGATTATTACCAAAAAACTTTGAA TGCCCAAATTTCAAAGACATTTACATGGATGAGAGATGATCTGCATGTTGTGTATGCTGTTGTAAAAATGAATACGGAGC ATTTTATGCTGGTGCAGCCTTTTTCCGGAAACCTTAAAAATCTGCTGGATACCAAAGGAGAAGGCACAATTTATAGACAC TGCTACTCTACTCCTGATATTGAAAAAGCTTTTGACGAATTAGCTGCAAATGGTGTTCAGCCTGAAGATGAAAATGGAAA TCTCATTTTAAGAGAAAATCTAAATTCTCCAAGCGGCATACGCATTATCTGGCTTCCAAAACGTTTTGGAGAATTTTCAA TTGAAATACTAGAAGAACAAGGTTTAAAAGAATTTATGCACGAGGCTTTTCAGTAA
Upstream 100 bases:
>100_bases TTTTTTGTTTAATAACCTTATCCAAAATTGTATTTTAGCTTTTATTTCTAACTAAAATGACAATTTATAATGTCATTGAA TCTATACTAAACAGCAGATA
Downstream 100 bases:
>100_bases AAAACAGCATTGTTTTTACTTCATTTCTTTTATAATGCTTTCAGTAACTTTAGCATAATCATTATTATAGTGATGTGAGC CTGGTATTTGTATTGTTTTT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Dioxygenase; Glyoxalase/Bleomycin Resistance Protein/Dioxygenase
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MELKFSHIDILVKDLQTACDYYQKTLNAQISKTFTWMRDDLHVVYAVVKMNTEHFMLVQPFSGNLKNLLDTKGEGTIYRH CYSTPDIEKAFDELAANGVQPEDENGNLILRENLNSPSGIRIIWLPKRFGEFSIEILEEQGLKEFMHEAFQ
Sequences:
>Translated_151_residues MELKFSHIDILVKDLQTACDYYQKTLNAQISKTFTWMRDDLHVVYAVVKMNTEHFMLVQPFSGNLKNLLDTKGEGTIYRH CYSTPDIEKAFDELAANGVQPEDENGNLILRENLNSPSGIRIIWLPKRFGEFSIEILEEQGLKEFMHEAFQ >Mature_151_residues MELKFSHIDILVKDLQTACDYYQKTLNAQISKTFTWMRDDLHVVYAVVKMNTEHFMLVQPFSGNLKNLLDTKGEGTIYRH CYSTPDIEKAFDELAANGVQPEDENGNLILRENLNSPSGIRIIWLPKRFGEFSIEILEEQGLKEFMHEAFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17516; Mature: 17516
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKFSHIDILVKDLQTACDYYQKTLNAQISKTFTWMRDDLHVVYAVVKMNTEHFMLVQP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECC FSGNLKNLLDTKGEGTIYRHCYSTPDIEKAFDELAANGVQPEDENGNLILRENLNSPSGI CCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCE RIIWLPKRFGEFSIEILEEQGLKEFMHEAFQ EEEEECCCCCCHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MELKFSHIDILVKDLQTACDYYQKTLNAQISKTFTWMRDDLHVVYAVVKMNTEHFMLVQP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECC FSGNLKNLLDTKGEGTIYRHCYSTPDIEKAFDELAANGVQPEDENGNLILRENLNSPSGI CCCCHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCE RIIWLPKRFGEFSIEILEEQGLKEFMHEAFQ EEEEECCCCCCHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA