| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300943
Identifier: 146300943
GI number: 146300943
Start: 3811636
End: 3812148
Strand: Direct
Name: 146300943
Synonym: Fjoh_3198
Alternate gene names: NA
Gene position: 3811636-3812148 (Clockwise)
Preceding gene: 146300939
Following gene: 146300949
Centisome position: 62.52
GC content: 26.51
Gene sequence:
>513_bases ATGAAAAATACCATTTTACCCTTACTTATTATCGCTTTAATTTTTAGTTCATGCAATACAAAACAGAAACCAGATACTGA TATTTCAATTTTATTTAAATATGAAAAATGTGTTGCTTTTGATTTTAAAAATAAAACAGTTAGAACATTTTATCGCGGAC AAGAAAATCTGGACACTATTTTATTTACTAAAAACGACAGTATTAAACTGCTCAGTTCTATCTCTAAAAACAAAATAGAT GAAATTAGAGGCGATTACAGTTATCCTGAATGTTATTGGCTTATGCCGAGTTCTGAAGATCAAATTGAATTTTTTAAAGA AGGCAAAATCTTAAATACTATTAGAATTAATTACAGACCGAATTGTTCTGATACTAAAGCACTGTCAAATAAGGAAATGA GAAATAGAGCTTTTGGAATTGATATCAGAAATTTAGTTTTAAACAAACCTTGTTTTAAAAGAGCGATGGATACTTTAAAA GTATATCGAATTAGAAAAAAAGGAATAATTTAA
Upstream 100 bases:
>100_bases ACTCGATTTCTATTTATAAAAGCCTATCAAAATGATAAAACAGCTGCTCAAAATGAAAAGATAATTGAAAACAAAAAAGT AATTTATTAATTTTCACAAC
Downstream 100 bases:
>100_bases TTTTCAAAAATGACGCGGAATGATGTATAAAAAAAGAGAGCTGTAAAAGCTCCCTTTGTATTTGATATTTTGTTTTAGCA GTTTCTGCTAAAAATTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKNTILPLLIIALIFSSCNTKQKPDTDISILFKYEKCVAFDFKNKTVRTFYRGQENLDTILFTKNDSIKLLSSISKNKID EIRGDYSYPECYWLMPSSEDQIEFFKEGKILNTIRINYRPNCSDTKALSNKEMRNRAFGIDIRNLVLNKPCFKRAMDTLK VYRIRKKGII
Sequences:
>Translated_170_residues MKNTILPLLIIALIFSSCNTKQKPDTDISILFKYEKCVAFDFKNKTVRTFYRGQENLDTILFTKNDSIKLLSSISKNKID EIRGDYSYPECYWLMPSSEDQIEFFKEGKILNTIRINYRPNCSDTKALSNKEMRNRAFGIDIRNLVLNKPCFKRAMDTLK VYRIRKKGII >Mature_170_residues MKNTILPLLIIALIFSSCNTKQKPDTDISILFKYEKCVAFDFKNKTVRTFYRGQENLDTILFTKNDSIKLLSSISKNKID EIRGDYSYPECYWLMPSSEDQIEFFKEGKILNTIRINYRPNCSDTKALSNKEMRNRAFGIDIRNLVLNKPCFKRAMDTLK VYRIRKKGII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19944; Mature: 19944
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTILPLLIIALIFSSCNTKQKPDTDISILFKYEKCVAFDFKNKTVRTFYRGQENLDTI CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEHHHHCCCCCCCEE LFTKNDSIKLLSSISKNKIDEIRGDYSYPECYWLMPSSEDQIEFFKEGKILNTIRINYRP EEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHCCCEEEEEEEEECC NCSDTKALSNKEMRNRAFGIDIRNLVLNKPCFKRAMDTLKVYRIRKKGII CCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNTILPLLIIALIFSSCNTKQKPDTDISILFKYEKCVAFDFKNKTVRTFYRGQENLDTI CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEHHHHCCCCCCCEE LFTKNDSIKLLSSISKNKIDEIRGDYSYPECYWLMPSSEDQIEFFKEGKILNTIRINYRP EEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHCCCEEEEEEEEECC NCSDTKALSNKEMRNRAFGIDIRNLVLNKPCFKRAMDTLKVYRIRKKGII CCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA