| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300683
Identifier: 146300683
GI number: 146300683
Start: 3475223
End: 3477064
Strand: Reverse
Name: 146300683
Synonym: Fjoh_2934
Alternate gene names: NA
Gene position: 3477064-3475223 (Counterclockwise)
Preceding gene: 146300685
Following gene: 146300682
Centisome position: 57.03
GC content: 32.41
Gene sequence:
>1842_bases ATGAAGATAATTTCTACATTTGTTAAAAATGATATAAGCCCCAATATGAGCAAAGAAGAAAAAATTCCTTTTGAAACCAT TCAGTTTGCAGGTGTTACTTTTAAAGTCATTAATCGACACCAAGCCCATGAAATTATAGGTGATCTTACTAATTTTCAAG ATCAGAAAATCTACAATGTTTTTGAAGATACCTGGCGTTTTCCTGATTATGAGGAAAATCCAATATTTCTTTTAGCAGAA GATGATGTAGAAATGGATTCATTTGAAATGGATTTTAGTACAGAAGAGCATTCGGATATTTTTATACTAGGATTTATTTT TAAAGGAAATCTTAAAGTTACTAAACTTATAAGCTCTTATGATACAGACAACTCTCCGGCTTTAATTGTGTTGGGAGAAA CTGAATCTGTAAATATTAATTTGTTTGGAAGTGTGCATTATTTAGGCGGAGGCGTAAAATGCGATGCACTTTTAGGAGAA TACAATCATGGAGAACTTTTTGTAAAAGGAGATGTTACTGCCTGGCTGATTTACAGTGACGATATGCTGATGCATTTTGA ACGTTTTACAGATGTTCAGGCTATAATTAGTGTAAACAGACCCGATGTATTAATCTGCAGCAATGTTACCGATGCTGATG GTTCAATTTTAACTATCGAAAACTACTTTCCGTCAACCCATAAATTATCTGATATTGCAGCCGATTCTTTTATCGAATTT TCTGATTATGGAACTGCTGTTTTAGACCATTACCATGACGCTTTTAAAGAAGGACTTTCGATTCTGGATTATGATAAAAC AGAAAAATATGCCTATGCTAATTTCCGAGAAGAATTCATAAAAATGGTTCAGGTTTTGTCTGAATTGGAATATGTAAAAC ATATTGGCAGAATCAGCAAAAAAGTTGGAAATAATGAATACTCTTTTATTCCTTTTGAATATGAAGGGAAGAAATACAGT CAGATTTCTGAAGAAATAGGAAATGGTTTTAATATCAAATTACGCGCGTTATGGTGTCATGATGATGAAGAAATTACGCT TGTTCTTGAATATCTGTATGACGATGGAAATCCAAAATACCAATGGGCAAATAATGAAACTGCTCAAGGAATAGAAATGT ACTGTGTAAAACGTGCTGCAATAGAAGCTTTTGAAGTACTTACAGCAGAACCTTCTGAAGATGACGACGACGATTATGAT GATGATGACAGCGACGATGAAACAGAATATGAAGAATATGAAGAATATGATAATAGTTTTTCATTAGAAGAATATGCTGT TCAGTTTGGAAATTATGCTTTACCGGAAGATTTAGTAAAACTATATGAGTTTGACCAGCAATACGGATCTGAAACGTATT CAGAATGTTTTGGTCTTACAATAACCGAAGAAAAAACCGGTATAAAAACATGGTCAGAAAAAGAAGAATTCTATAACAGT TTTATTGAATTTGCCGGAGCAAATGGTTCAGGAAGTTCTTATGCTTACTGGCTTATTGATAATGATTTGAATAATTGTCC GATAGTAGTTTTTGGAGACGAAGGAGGAATTCATGTAGTAGCAGAAAACATTCGTAAATTAATTCACATTTTAACTCTGG ATACCGAAATTTCAGTTGATTTTGATTCTGCTTATTTTTATAAAGATGATGAATATTATGATGAAAACGAAAATAAAGCA GAGTTTCACGAATGGGTTAAAAATGAATTTAATCTGGATCCGATAGAATCAAACGAAGAAACGGATGAAATTGTAAACCA GGCCAAAGAAAAGTATAAAAAACGTTTAAACGATTTTTTAACGAAGTTTGATATTGAAATAGGAGAAGACGAAGAAGAAT AG
Upstream 100 bases:
>100_bases CTTTAGAAGTTTATAATTTAAATATATAACTCATCTTCAAAAACTCTGCTGTTTTTCCGGCAGAGTTTTTAATTATTTAA AGTAAGTATTATTTTAATAA
Downstream 100 bases:
>100_bases TTTTTATCTTTGAATAAAATAAAAAAAAATGGCAACACATTTAGCACTTTTACGCGGTATAAACGTTTCCGGTCATAATA TGATGAAAATGGAAGCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MKIISTFVKNDISPNMSKEEKIPFETIQFAGVTFKVINRHQAHEIIGDLTNFQDQKIYNVFEDTWRFPDYEENPIFLLAE DDVEMDSFEMDFSTEEHSDIFILGFIFKGNLKVTKLISSYDTDNSPALIVLGETESVNINLFGSVHYLGGGVKCDALLGE YNHGELFVKGDVTAWLIYSDDMLMHFERFTDVQAIISVNRPDVLICSNVTDADGSILTIENYFPSTHKLSDIAADSFIEF SDYGTAVLDHYHDAFKEGLSILDYDKTEKYAYANFREEFIKMVQVLSELEYVKHIGRISKKVGNNEYSFIPFEYEGKKYS QISEEIGNGFNIKLRALWCHDDEEITLVLEYLYDDGNPKYQWANNETAQGIEMYCVKRAAIEAFEVLTAEPSEDDDDDYD DDDSDDETEYEEYEEYDNSFSLEEYAVQFGNYALPEDLVKLYEFDQQYGSETYSECFGLTITEEKTGIKTWSEKEEFYNS FIEFAGANGSGSSYAYWLIDNDLNNCPIVVFGDEGGIHVVAENIRKLIHILTLDTEISVDFDSAYFYKDDEYYDENENKA EFHEWVKNEFNLDPIESNEETDEIVNQAKEKYKKRLNDFLTKFDIEIGEDEEE
Sequences:
>Translated_613_residues MKIISTFVKNDISPNMSKEEKIPFETIQFAGVTFKVINRHQAHEIIGDLTNFQDQKIYNVFEDTWRFPDYEENPIFLLAE DDVEMDSFEMDFSTEEHSDIFILGFIFKGNLKVTKLISSYDTDNSPALIVLGETESVNINLFGSVHYLGGGVKCDALLGE YNHGELFVKGDVTAWLIYSDDMLMHFERFTDVQAIISVNRPDVLICSNVTDADGSILTIENYFPSTHKLSDIAADSFIEF SDYGTAVLDHYHDAFKEGLSILDYDKTEKYAYANFREEFIKMVQVLSELEYVKHIGRISKKVGNNEYSFIPFEYEGKKYS QISEEIGNGFNIKLRALWCHDDEEITLVLEYLYDDGNPKYQWANNETAQGIEMYCVKRAAIEAFEVLTAEPSEDDDDDYD DDDSDDETEYEEYEEYDNSFSLEEYAVQFGNYALPEDLVKLYEFDQQYGSETYSECFGLTITEEKTGIKTWSEKEEFYNS FIEFAGANGSGSSYAYWLIDNDLNNCPIVVFGDEGGIHVVAENIRKLIHILTLDTEISVDFDSAYFYKDDEYYDENENKA EFHEWVKNEFNLDPIESNEETDEIVNQAKEKYKKRLNDFLTKFDIEIGEDEEE >Mature_613_residues MKIISTFVKNDISPNMSKEEKIPFETIQFAGVTFKVINRHQAHEIIGDLTNFQDQKIYNVFEDTWRFPDYEENPIFLLAE DDVEMDSFEMDFSTEEHSDIFILGFIFKGNLKVTKLISSYDTDNSPALIVLGETESVNINLFGSVHYLGGGVKCDALLGE YNHGELFVKGDVTAWLIYSDDMLMHFERFTDVQAIISVNRPDVLICSNVTDADGSILTIENYFPSTHKLSDIAADSFIEF SDYGTAVLDHYHDAFKEGLSILDYDKTEKYAYANFREEFIKMVQVLSELEYVKHIGRISKKVGNNEYSFIPFEYEGKKYS QISEEIGNGFNIKLRALWCHDDEEITLVLEYLYDDGNPKYQWANNETAQGIEMYCVKRAAIEAFEVLTAEPSEDDDDDYD DDDSDDETEYEEYEEYDNSFSLEEYAVQFGNYALPEDLVKLYEFDQQYGSETYSECFGLTITEEKTGIKTWSEKEEFYNS FIEFAGANGSGSSYAYWLIDNDLNNCPIVVFGDEGGIHVVAENIRKLIHILTLDTEISVDFDSAYFYKDDEYYDENENKA EFHEWVKNEFNLDPIESNEETDEIVNQAKEKYKKRLNDFLTKFDIEIGEDEEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70951; Mature: 70951
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIISTFVKNDISPNMSKEEKIPFETIQFAGVTFKVINRHQAHEIIGDLTNFQDQKIYNV CCHHHHHHHCCCCCCCCCCCCCCHHHEEECCEEEEEHHHHHHHHHHHHHHCCCHHHHHHH FEDTWRFPDYEENPIFLLAEDDVEMDSFEMDFSTEEHSDIFILGFIFKGNLKVTKLISSY HHHHCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCEEEEEEEEECCEEEEEHHHHC DTDNSPALIVLGETESVNINLFGSVHYLGGGVKCDALLGEYNHGELFVKGDVTAWLIYSD CCCCCCEEEEEECCCEEEEEEEEEEEECCCCEEEEHEECCCCCCEEEEECCEEEEEEECC DMLMHFERFTDVQAIISVNRPDVLICSNVTDADGSILTIENYFPSTHKLSDIAADSFIEF CHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHCCEEE SDYGTAVLDHYHDAFKEGLSILDYDKTEKYAYANFREEFIKMVQVLSELEYVKHIGRISK CCCCHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVGNNEYSFIPFEYEGKKYSQISEEIGNGFNIKLRALWCHDDEEITLVLEYLYDDGNPKY HHCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCE QWANNETAQGIEMYCVKRAAIEAFEVLTAEPSEDDDDDYDDDDSDDETEYEEYEEYDNSF EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC SLEEYAVQFGNYALPEDLVKLYEFDQQYGSETYSECFGLTITEEKTGIKTWSEKEEFYNS CHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCEEECCCCCCCCCHHHHHHHHH FIEFAGANGSGSSYAYWLIDNDLNNCPIVVFGDEGGIHVVAENIRKLIHILTLDTEISVD HHHHCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCEEHHHHHHHHHHHHHEECCEEEEE FDSAYFYKDDEYYDENENKAEFHEWVKNEFNLDPIESNEETDEIVNQAKEKYKKRLNDFL ECCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TKFDIEIGEDEEE HHCCCEECCCCCC >Mature Secondary Structure MKIISTFVKNDISPNMSKEEKIPFETIQFAGVTFKVINRHQAHEIIGDLTNFQDQKIYNV CCHHHHHHHCCCCCCCCCCCCCCHHHEEECCEEEEEHHHHHHHHHHHHHHCCCHHHHHHH FEDTWRFPDYEENPIFLLAEDDVEMDSFEMDFSTEEHSDIFILGFIFKGNLKVTKLISSY HHHHCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCEEEEEEEEECCEEEEEHHHHC DTDNSPALIVLGETESVNINLFGSVHYLGGGVKCDALLGEYNHGELFVKGDVTAWLIYSD CCCCCCEEEEEECCCEEEEEEEEEEEECCCCEEEEHEECCCCCCEEEEECCEEEEEEECC DMLMHFERFTDVQAIISVNRPDVLICSNVTDADGSILTIENYFPSTHKLSDIAADSFIEF CHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHCCEEE SDYGTAVLDHYHDAFKEGLSILDYDKTEKYAYANFREEFIKMVQVLSELEYVKHIGRISK CCCCHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVGNNEYSFIPFEYEGKKYSQISEEIGNGFNIKLRALWCHDDEEITLVLEYLYDDGNPKY HHCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCE QWANNETAQGIEMYCVKRAAIEAFEVLTAEPSEDDDDDYDDDDSDDETEYEEYEEYDNSF EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC SLEEYAVQFGNYALPEDLVKLYEFDQQYGSETYSECFGLTITEEKTGIKTWSEKEEFYNS CHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCEEECCCCCCCCCHHHHHHHHH FIEFAGANGSGSSYAYWLIDNDLNNCPIVVFGDEGGIHVVAENIRKLIHILTLDTEISVD HHHHCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCEEHHHHHHHHHHHHHEECCEEEEE FDSAYFYKDDEYYDENENKAEFHEWVKNEFNLDPIESNEETDEIVNQAKEKYKKRLNDFL ECCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TKFDIEIGEDEEE HHCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA