| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300682
Identifier: 146300682
GI number: 146300682
Start: 3474655
End: 3475194
Strand: Reverse
Name: 146300682
Synonym: Fjoh_2933
Alternate gene names: NA
Gene position: 3475194-3474655 (Counterclockwise)
Preceding gene: 146300683
Following gene: 146300681
Centisome position: 57.0
GC content: 30.74
Gene sequence:
>540_bases ATGGCAACACATTTAGCACTTTTACGCGGTATAAACGTTTCCGGTCATAATATGATGAAAATGGAAGCTTTAAAAACCAT GCTGGAAAATATAGGTTTTCAAAACGTTCGAACCTATCTGCAGTCCGGAAATGTTTTTGTAGAAAGCGAAGAAGAAGCTT CAAAAGTTGGGTTTATGATTAAACAGGAAATTTTTAAGGTTTTTGGACATGAAGTTCCTGTAATAGTGCTTTCAAAAAAA GATTTAGAATTATCTTTTGCCAATAATCCTTATTTGAAAGAAAAAGACATTGATATTAAAAGATTATATATCGTTTTTGT TTCAATTGCTTTAAAAAAAGAACACATTCACGATTTAAAAATTAGTCAGTTTAAACCCGATGAAGCAAGCATTGACGAAA ACAGAATTTTTATTAAATATGCTGTTGGCGCCGGAAAAACAAGATTAGAACTTAAATATATCGAGAAAAAATTAAATGTA ATAGGAACGATGCGAAACCTTAATACCGTAACGAACCTGCTTAAAATGTACGAAGAATAA
Upstream 100 bases:
>100_bases AAGTATAAAAAACGTTTAAACGATTTTTTAACGAAGTTTGATATTGAAATAGGAGAAGACGAAGAAGAATAGTTTTTATC TTTGAATAAAATAAAAAAAA
Downstream 100 bases:
>100_bases TGAAAAAAATAATTACAATCTTATTAATTGCTTGTTTCTGCCAGTTAACGGCAGCACAAGAAAAAACTAAAACCAACATT GAAAATTTCAACACTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MATHLALLRGINVSGHNMMKMEALKTMLENIGFQNVRTYLQSGNVFVESEEEASKVGFMIKQEIFKVFGHEVPVIVLSKK DLELSFANNPYLKEKDIDIKRLYIVFVSIALKKEHIHDLKISQFKPDEASIDENRIFIKYAVGAGKTRLELKYIEKKLNV IGTMRNLNTVTNLLKMYEE
Sequences:
>Translated_179_residues MATHLALLRGINVSGHNMMKMEALKTMLENIGFQNVRTYLQSGNVFVESEEEASKVGFMIKQEIFKVFGHEVPVIVLSKK DLELSFANNPYLKEKDIDIKRLYIVFVSIALKKEHIHDLKISQFKPDEASIDENRIFIKYAVGAGKTRLELKYIEKKLNV IGTMRNLNTVTNLLKMYEE >Mature_178_residues ATHLALLRGINVSGHNMMKMEALKTMLENIGFQNVRTYLQSGNVFVESEEEASKVGFMIKQEIFKVFGHEVPVIVLSKKD LELSFANNPYLKEKDIDIKRLYIVFVSIALKKEHIHDLKISQFKPDEASIDENRIFIKYAVGAGKTRLELKYIEKKLNVI GTMRNLNTVTNLLKMYEE
Specific function: Unknown
COG id: COG3797
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20610; Mature: 20478
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHLALLRGINVSGHNMMKMEALKTMLENIGFQNVRTYLQSGNVFVESEEEASKVGFMI CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCHHHHHHHHHH KQEIFKVFGHEVPVIVLSKKDLELSFANNPYLKEKDIDIKRLYIVFVSIALKKEHIHDLK HHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC ISQFKPDEASIDENRIFIKYAVGAGKTRLELKYIEKKLNVIGTMRNLNTVTNLLKMYEE CCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATHLALLRGINVSGHNMMKMEALKTMLENIGFQNVRTYLQSGNVFVESEEEASKVGFMI CCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCHHHHHHHHHH KQEIFKVFGHEVPVIVLSKKDLELSFANNPYLKEKDIDIKRLYIVFVSIALKKEHIHDLK HHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC ISQFKPDEASIDENRIFIKYAVGAGKTRLELKYIEKKLNVIGTMRNLNTVTNLLKMYEE CCCCCCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA