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The map label for this gene is yciF [H]

Identifier: 146300400

GI number: 146300400

Start: 3148512

End: 3149081

Strand: Reverse

Name: yciF [H]

Synonym: Fjoh_2646

Alternate gene names: 146300400

Gene position: 3149081-3148512 (Counterclockwise)

Preceding gene: 146300401

Following gene: 146300399

Centisome position: 51.65

GC content: 43.51

Gene sequence:

>570_bases
ATGAAAAATACAGAAACAAAAAATACTAAAGATACGGCTGAAAAAAACGTAAAAAATGCTGTTGTCCAGCCGAAAACGGG
AGCCGCCTCGGAATTGAAGGAATTATTTATTGACAGTCTGAAAGACATCTACTGGGCTGAAAACGCATTGGTAACGGCTC
TGCCTAAAATGCAGGCCAATGCAACTGACCCAGCACTGGTTTCGGCTATAAAAGAACACCACGCTGTAACCCAAAATCAG
GTAGCAAGACTGGAAAAGGTTTTTGATTTTCTGGGCGAAAAAGCTGAAGGAAAAAAATGCGAGGCGATGGCCGGACTGCT
CAAGGAAGGCGACAGCATTTTGGAAGAAACGGAACCTGGAGCAGTTCGCGATGCCGGAATTATTGCAGCTTCACAAAAAA
TTGAGCATTATGAAATTGCCACATACGGAACTTTGGCCGCTTTTGCCAAAACCCTTGGGGAAAATGATGCCGCAAAATTA
TTGATTCAGACGCTGGCTGAAGAAAAAGAAGCAGACTGCCTTTTAAACGATGTGGCACTGAATGCTATAAATAGTACAGC
GGCAGAGTAA

Upstream 100 bases:

>100_bases
GAACTGAAAAATTTGCAGCAGACTTTATCGCAGCAATGGGAAAACACAGATTCTGGGAGCGCGAACCTAACCTTTACAAC
TAATACTAAAAATATAAATC

Downstream 100 bases:

>100_bases
CCGTTTATAATCTCTACTACTTAAAGGTCTTGGAAATAATTATACTTATTTCTAAGGCCTTATTTAATAAAATGAAAAAA
CAGCACGGCAACAGCGCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKNTETKNTKDTAEKNVKNAVVQPKTGAASELKELFIDSLKDIYWAENALVTALPKMQANATDPALVSAIKEHHAVTQNQ
VARLEKVFDFLGEKAEGKKCEAMAGLLKEGDSILEETEPGAVRDAGIIAASQKIEHYEIATYGTLAAFAKTLGENDAAKL
LIQTLAEEKEADCLLNDVALNAINSTAAE

Sequences:

>Translated_189_residues
MKNTETKNTKDTAEKNVKNAVVQPKTGAASELKELFIDSLKDIYWAENALVTALPKMQANATDPALVSAIKEHHAVTQNQ
VARLEKVFDFLGEKAEGKKCEAMAGLLKEGDSILEETEPGAVRDAGIIAASQKIEHYEIATYGTLAAFAKTLGENDAAKL
LIQTLAEEKEADCLLNDVALNAINSTAAE
>Mature_189_residues
MKNTETKNTKDTAEKNVKNAVVQPKTGAASELKELFIDSLKDIYWAENALVTALPKMQANATDPALVSAIKEHHAVTQNQ
VARLEKVFDFLGEKAEGKKCEAMAGLLKEGDSILEETEPGAVRDAGIIAASQKIEHYEIATYGTLAAFAKTLGENDAAKL
LIQTLAEEKEADCLLNDVALNAINSTAAE

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=157, Percent_Identity=43.9490445859873, Blast_Score=124, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 20315; Mature: 20315

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTETKNTKDTAEKNVKNAVVQPKTGAASELKELFIDSLKDIYWAENALVTALPKMQAN
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ATDPALVSAIKEHHAVTQNQVARLEKVFDFLGEKAEGKKCEAMAGLLKEGDSILEETEPG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCC
AVRDAGIIAASQKIEHYEIATYGTLAAFAKTLGENDAAKLLIQTLAEEKEADCLLNDVAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NAINSTAAE
HHHHHHCCC
>Mature Secondary Structure
MKNTETKNTKDTAEKNVKNAVVQPKTGAASELKELFIDSLKDIYWAENALVTALPKMQAN
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ATDPALVSAIKEHHAVTQNQVARLEKVFDFLGEKAEGKKCEAMAGLLKEGDSILEETEPG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCC
AVRDAGIIAASQKIEHYEIATYGTLAAFAKTLGENDAAKLLIQTLAEEKEADCLLNDVAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NAINSTAAE
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]