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The map label for this gene is yhfW [H]

Identifier: 146300399

GI number: 146300399

Start: 3146713

End: 3148293

Strand: Reverse

Name: yhfW [H]

Synonym: Fjoh_2645

Alternate gene names: 146300399

Gene position: 3148293-3146713 (Counterclockwise)

Preceding gene: 146300400

Following gene: 146300398

Centisome position: 51.64

GC content: 43.83

Gene sequence:

>1581_bases
ATGAAAAATGCGGATGAAAATTTAAATGACGGAACTATTACTTCTGGAGAAAATGTATCGTACTGGATCGATACTGCGCC
CAACACTTCTTTTGAAAAACCCATCAGGAATATAGAAACTGAGGTTTTGATCATTGGAGGCGGCATAGCCGGCCTTACAA
CAGCTTATAATCTTGTCAAGGCAGGGAAAAAAGTAGTTTTGGTAGAAGACGGTTTCATAGGCAGCGGGGAATCCGGCCGC
ACTACTGCACACCTGACCAGTGCACTGGACGACCGATACTATTTTCTGCAGGATACTTTTGGAAAGGATGGAGCAAAACT
GGCAGCAGAAAGCCATACGGCGGCCATATCCCAAATTGAAAAAAATATCAAAGACTTAAATATCGACTGCTCTTTTAAAA
GGGTAAACGGATATCTTTTTCTTCATCCAAGCGATGACGAGAAAAACCTTCAGAAAGAATTTAAAGCCACTCAGAATGCA
GGTCTCAATACAGGCATCTTAAACAGGACACCTGGTATAGCAGACGGTGATACTACACCCTGTCTAGCTTTTTACAATCA
GGCACAGTTTCATATTCTGCAGTATCTGGATGGACTGGCCCGAGCTGTACAGTCGCTGGGAGGCGTGATTTATACCGAAG
CGCGCGCTGAAAAAATATCACAAGAAGGAGCGTTAGTCAATAATTACATCTTTAGTGCGGAAACAGTTGTTGTGGCAACC
AACAGCCCGGTAAATGACCTGTTTACCATGCATACCAAACAGGCAGCCTACAGAACTTACGTTATCGCGGGAAAGATACC
GAAAGGAAAGCTGCCGTACTCACTTTGGTGGGATACGGGGGATGCCGCTTCTAAGTGGACTGCCCAGCCGTACCATTATG
TAAGGGTTGAAAGCTTTGACGATACGCACGATCTCCTTATATCTGGAGGTGAGGATCATAAAACAGGCCAGTCTGATGAA
GAAGGAATCAGCGAATCTGAAAGGTATGAAAAGCTCGAACAGTGGACACGAAGCTATTTCCCAGTGCTAGACGAGATTAC
CTATAAATGGTCAGGCCAGGTAATGGAACCTGTGGACTCACTGGGCTTTATGGGCAGGAATCCCGGAGATGAAAATATTT
ATATCATTACAGGTGACTCAGGAAATGGTATGACGCATGCAACCATTGGCGCAGCAATAATCAGCGATGCCATTTTAGGG
ATTAAAAATAAATATGAAGATCTTTACAGCCCTTCCAGAATTACTGTGAAAACGGCTTATGATTTTACAAAAGAAGCTGC
AAATATGGCTTCACAATATCTGGACTGGATATCCTCATCAGACTTAAAAAGTACAGCTGATCTCAAGCCGGGTGAAGGCG
GTATTATCTCTTCGGGATTAAAAAAAGTTGCGGTCTACCGTGATTATGACAAGACCCTTAAAGCATTTTCAGCAGTTTGT
CCCCATCTGGGCTGCATAGTGCAGTGGAACAGCGACGAGAAATCTTTTGATTGTCCCTGCCATGGATCCAGATTTGCCAC
GGACGGAACTGTAATGAACGGGCCTGCAGATAAGAATTTAAAACCAATCACAGTAAAATAA

Upstream 100 bases:

>100_bases
GCAATGTTGTAAAGTTCGAATTGCAGTCTGTAAGACAGAACGTTAATGCTTTTTTAATTTTGAAGCATAAAGTTCACCTT
TAACTTTTAAGAAATAGAAT

Downstream 100 bases:

>100_bases
CAAATAAAAACTATGGATTCTCACAGTATATTACAGGTCTTGTTATCTTCTGCCGCAGCTACAACAGTTATGACATTATG
CAGTTATGCAGTCTCTGCAG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MKNADENLNDGTITSGENVSYWIDTAPNTSFEKPIRNIETEVLIIGGGIAGLTTAYNLVKAGKKVVLVEDGFIGSGESGR
TTAHLTSALDDRYYFLQDTFGKDGAKLAAESHTAAISQIEKNIKDLNIDCSFKRVNGYLFLHPSDDEKNLQKEFKATQNA
GLNTGILNRTPGIADGDTTPCLAFYNQAQFHILQYLDGLARAVQSLGGVIYTEARAEKISQEGALVNNYIFSAETVVVAT
NSPVNDLFTMHTKQAAYRTYVIAGKIPKGKLPYSLWWDTGDAASKWTAQPYHYVRVESFDDTHDLLISGGEDHKTGQSDE
EGISESERYEKLEQWTRSYFPVLDEITYKWSGQVMEPVDSLGFMGRNPGDENIYIITGDSGNGMTHATIGAAIISDAILG
IKNKYEDLYSPSRITVKTAYDFTKEAANMASQYLDWISSSDLKSTADLKPGEGGIISSGLKKVAVYRDYDKTLKAFSAVC
PHLGCIVQWNSDEKSFDCPCHGSRFATDGTVMNGPADKNLKPITVK

Sequences:

>Translated_526_residues
MKNADENLNDGTITSGENVSYWIDTAPNTSFEKPIRNIETEVLIIGGGIAGLTTAYNLVKAGKKVVLVEDGFIGSGESGR
TTAHLTSALDDRYYFLQDTFGKDGAKLAAESHTAAISQIEKNIKDLNIDCSFKRVNGYLFLHPSDDEKNLQKEFKATQNA
GLNTGILNRTPGIADGDTTPCLAFYNQAQFHILQYLDGLARAVQSLGGVIYTEARAEKISQEGALVNNYIFSAETVVVAT
NSPVNDLFTMHTKQAAYRTYVIAGKIPKGKLPYSLWWDTGDAASKWTAQPYHYVRVESFDDTHDLLISGGEDHKTGQSDE
EGISESERYEKLEQWTRSYFPVLDEITYKWSGQVMEPVDSLGFMGRNPGDENIYIITGDSGNGMTHATIGAAIISDAILG
IKNKYEDLYSPSRITVKTAYDFTKEAANMASQYLDWISSSDLKSTADLKPGEGGIISSGLKKVAVYRDYDKTLKAFSAVC
PHLGCIVQWNSDEKSFDCPCHGSRFATDGTVMNGPADKNLKPITVK
>Mature_526_residues
MKNADENLNDGTITSGENVSYWIDTAPNTSFEKPIRNIETEVLIIGGGIAGLTTAYNLVKAGKKVVLVEDGFIGSGESGR
TTAHLTSALDDRYYFLQDTFGKDGAKLAAESHTAAISQIEKNIKDLNIDCSFKRVNGYLFLHPSDDEKNLQKEFKATQNA
GLNTGILNRTPGIADGDTTPCLAFYNQAQFHILQYLDGLARAVQSLGGVIYTEARAEKISQEGALVNNYIFSAETVVVAT
NSPVNDLFTMHTKQAAYRTYVIAGKIPKGKLPYSLWWDTGDAASKWTAQPYHYVRVESFDDTHDLLISGGEDHKTGQSDE
EGISESERYEKLEQWTRSYFPVLDEITYKWSGQVMEPVDSLGFMGRNPGDENIYIITGDSGNGMTHATIGAAIISDAILG
IKNKYEDLYSPSRITVKTAYDFTKEAANMASQYLDWISSSDLKSTADLKPGEGGIISSGLKKVAVYRDYDKTLKAFSAVC
PHLGCIVQWNSDEKSFDCPCHGSRFATDGTVMNGPADKNLKPITVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=404, Percent_Identity=24.009900990099, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 57673; Mature: 57673

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNADENLNDGTITSGENVSYWIDTAPNTSFEKPIRNIETEVLIIGGGIAGLTTAYNLVK
CCCCCCCCCCCCEECCCCEEEEEECCCCCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHH
AGKKVVLVEDGFIGSGESGRTTAHLTSALDDRYYFLQDTFGKDGAKLAAESHTAAISQIE
CCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
KNIKDLNIDCSFKRVNGYLFLHPSDDEKNLQKEFKATQNAGLNTGILNRTPGIADGDTTP
HHHHHCCCEEEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
CLAFYNQAQFHILQYLDGLARAVQSLGGVIYTEARAEKISQEGALVNNYIFSAETVVVAT
HHHHHCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCEEHHEEEECCEEEEEC
NSPVNDLFTMHTKQAAYRTYVIAGKIPKGKLPYSLWWDTGDAASKWTAQPYHYVRVESFD
CCCHHHHHHHHHHHHHEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCC
DTHDLLISGGEDHKTGQSDEEGISESERYEKLEQWTRSYFPVLDEITYKWSGQVMEPVDS
CCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHEECCCCCHHHHHHH
LGFMGRNPGDENIYIITGDSGNGMTHATIGAAIISDAILGIKNKYEDLYSPSRITVKTAY
HCCCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH
DFTKEAANMASQYLDWISSSDLKSTADLKPGEGGIISSGLKKVAVYRDYDKTLKAFSAVC
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHEEEECCHHHHHHHHHHHC
PHLGCIVQWNSDEKSFDCPCHGSRFATDGTVMNGPADKNLKPITVK
CCCCEEEEECCCCCCCCCCCCCCEECCCCEEECCCCCCCCCCEEEC
>Mature Secondary Structure
MKNADENLNDGTITSGENVSYWIDTAPNTSFEKPIRNIETEVLIIGGGIAGLTTAYNLVK
CCCCCCCCCCCCEECCCCEEEEEECCCCCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHH
AGKKVVLVEDGFIGSGESGRTTAHLTSALDDRYYFLQDTFGKDGAKLAAESHTAAISQIE
CCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
KNIKDLNIDCSFKRVNGYLFLHPSDDEKNLQKEFKATQNAGLNTGILNRTPGIADGDTTP
HHHHHCCCEEEEEEECCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
CLAFYNQAQFHILQYLDGLARAVQSLGGVIYTEARAEKISQEGALVNNYIFSAETVVVAT
HHHHHCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHCCCEEHHEEEECCEEEEEC
NSPVNDLFTMHTKQAAYRTYVIAGKIPKGKLPYSLWWDTGDAASKWTAQPYHYVRVESFD
CCCHHHHHHHHHHHHHEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCC
DTHDLLISGGEDHKTGQSDEEGISESERYEKLEQWTRSYFPVLDEITYKWSGQVMEPVDS
CCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHEECCCCCHHHHHHH
LGFMGRNPGDENIYIITGDSGNGMTHATIGAAIISDAILGIKNKYEDLYSPSRITVKTAY
HCCCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH
DFTKEAANMASQYLDWISSSDLKSTADLKPGEGGIISSGLKKVAVYRDYDKTLKAFSAVC
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHEEEECCHHHHHHHHHHHC
PHLGCIVQWNSDEKSFDCPCHGSRFATDGTVMNGPADKNLKPITVK
CCCCEEEEECCCCCCCCCCCCCCEECCCCEEECCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]